Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RNU6-82P-201ENST00000363970 107 ntBASIC1.51□□□□□ -2.17
PKNOX1P55347 SNORA69-201ENST00000383895 132 ntBASIC1.51□□□□□ -2.17
PKNOX1P55347 MIR934-201ENST00000401241 83 ntBASIC1.51□□□□□ -2.17
PKNOX1P55347 AC123900.1-201ENST00000420390 96 ntBASIC1.51□□□□□ -2.17
PKNOX1P55347 RNU1-131P-201ENST00000458943 161 ntBASIC1.51□□□□□ -2.17
PKNOX1P55347 RNU1-98P-201ENST00000458992 160 ntBASIC1.51□□□□□ -2.17
PKNOX1P55347 RNU6-261P-201ENST00000459506 102 ntBASIC1.51□□□□□ -2.17
PKNOX1P55347 AC130509.1-201ENST00000464158 433 ntBASIC1.51□□□□□ -2.17
PKNOX1P55347 TOMM22P6-201ENST00000465035 409 ntBASIC1.51□□□□□ -2.17
PKNOX1P55347 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.51□□□□□ -2.17
PKNOX1P55347 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.51□□□□□ -2.17
PKNOX1P55347 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.51□□□□□ -2.17
PKNOX1P55347 RNU6-1098P-201ENST00000516772 96 ntBASIC1.51□□□□□ -2.17
PKNOX1P55347 RNU6-612P-201ENST00000516909 102 ntBASIC1.51□□□□□ -2.17
PKNOX1P55347 RNU6-835P-201ENST00000516974 104 ntBASIC1.51□□□□□ -2.17
PKNOX1P55347 AC027807.1-201ENST00000559921 996 ntBASIC1.51□□□□□ -2.17
PKNOX1P55347 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.51□□□□□ -2.17
PKNOX1P55347 AC116312.1-201ENST00000606841 314 ntBASIC1.51□□□□□ -2.17
PKNOX1P55347 AC009994.1-201ENST00000606889 253 ntBASIC1.51□□□□□ -2.17
PKNOX1P55347 AL121757.2-201ENST00000611223 313 ntBASIC1.51□□□□□ -2.17
PKNOX1P55347 Z99129.1-201ENST00000612510 255 ntBASIC1.51□□□□□ -2.17
PKNOX1P55347 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.51□□□□□ -2.17
PKNOX1P55347 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.51□□□□□ -2.17
PKNOX1P55347 MIR6863-201ENST00000636112 90 ntBASIC1.51□□□□□ -2.17
PKNOX1P55347 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.51□□□□□ -2.17
PKNOX1P55347 AC233981.2-201ENST00000611524 1614 ntBASIC1.51□□□□□ -2.17
PKNOX1P55347 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
PKNOX1P55347 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.5□□□□□ -2.17
PKNOX1P55347 AL356292.1-201ENST00000283110 373 ntBASIC1.5□□□□□ -2.17
PKNOX1P55347 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
PKNOX1P55347 RNU6-1322P-201ENST00000364309 107 ntBASIC1.5□□□□□ -2.17
PKNOX1P55347 RNU4-66P-201ENST00000365199 138 ntBASIC1.5□□□□□ -2.17
PKNOX1P55347 SNORA32.2-201ENST00000384049 122 ntBASIC1.5□□□□□ -2.17
PKNOX1P55347 SNORD37.1-201ENST00000390968 65 ntBASIC1.5□□□□□ -2.17
PKNOX1P55347 RNU6-648P-201ENST00000410190 107 ntBASIC1.5□□□□□ -2.17
PKNOX1P55347 MTCO3P41-201ENST00000414801 328 ntBASIC1.5□□□□□ -2.17
PKNOX1P55347 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.5□□□□□ -2.17
PKNOX1P55347 SNRPEP8-201ENST00000442866 260 ntBASIC1.5□□□□□ -2.17
PKNOX1P55347 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.5□□□□□ -2.17
PKNOX1P55347 AMD1P1-201ENST00000457220 922 ntBASIC1.5□□□□□ -2.17
PKNOX1P55347 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.5□□□□□ -2.17
PKNOX1P55347 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.5□□□□□ -2.17
PKNOX1P55347 SNORA25.15-201ENST00000516487 89 ntBASIC1.5□□□□□ -2.17
PKNOX1P55347 RNU6-295P-201ENST00000516901 104 ntBASIC1.5□□□□□ -2.17
PKNOX1P55347 RNU6-323P-201ENST00000521915 107 ntBASIC1.5□□□□□ -2.17
PKNOX1P55347 AC104576.1-201ENST00000524225 88 ntBASIC1.5□□□□□ -2.17
PKNOX1P55347 MIR5692C1-201ENST00000585309 91 ntBASIC1.5□□□□□ -2.17
PKNOX1P55347 AC010900.2-201ENST00000604508 210 ntBASIC1.5□□□□□ -2.17
PKNOX1P55347 BX248123.2-201ENST00000606318 124 ntBASIC1.5□□□□□ -2.17
PKNOX1P55347 AC092807.2-201ENST00000609367 243 ntBASIC1.5□□□□□ -2.17
PKNOX1P55347 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.5□□□□□ -2.17
PKNOX1P55347 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.5□□□□□ -2.17
PKNOX1P55347 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
PKNOX1P55347 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
PKNOX1P55347 RNU1-76P-201ENST00000362903 159 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 RNU6-259P-201ENST00000383999 107 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 MIR514A2-201ENST00000385131 88 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 MIR514A3-201ENST00000385132 88 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
PKNOX1P55347 CALM2P3-201ENST00000400429 449 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 MIR208B-201ENST00000401172 77 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.49□□□□□ -2.17
PKNOX1P55347 AC012306.1-201ENST00000423267 114 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 AC139712.2-201ENST00000424302 339 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.49□□□□□ -2.17
PKNOX1P55347 SNORA59A-201ENST00000459326 152 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 RNU6-1037P-201ENST00000459571 107 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 AC023790.1-201ENST00000482174 347 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 Y_RNA.654-201ENST00000497848 106 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 RNU6-567P-201ENST00000516746 107 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 AC087854.1-201ENST00000519706 414 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 DEFB131C-201ENST00000528817 165 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 AC025423.5-201ENST00000550230 219 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.49□□□□□ -2.17
PKNOX1P55347 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.49□□□□□ -2.17
PKNOX1P55347 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.49□□□□□ -2.17
PKNOX1P55347 MIR3683-201ENST00000580847 82 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 MIR4513-201ENST00000581077 86 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.49□□□□□ -2.17
PKNOX1P55347 PIGPP4-201ENST00000584447 307 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 AC011494.1-201ENST00000596454 237 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 AL158209.2-201ENST00000619266 216 ntBASIC1.49□□□□□ -2.17
PKNOX1P55347 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.49□□□□□ -2.17
PKNOX1P55347 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
PKNOX1P55347 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
PKNOX1P55347 AC009541.1-201ENST00000438279 2662 ntBASIC1.48□□□□□ -2.17
PKNOX1P55347 RNA5SP126-201ENST00000365092 109 ntBASIC1.48□□□□□ -2.17
PKNOX1P55347 RNU6-1329P-201ENST00000365664 107 ntBASIC1.48□□□□□ -2.17
PKNOX1P55347 SNORD116-2-201ENST00000384274 95 ntBASIC1.48□□□□□ -2.17
PKNOX1P55347 SNORD116-6-201ENST00000384711 96 ntBASIC1.48□□□□□ -2.17
PKNOX1P55347 MIR504-201ENST00000385065 83 ntBASIC1.48□□□□□ -2.17
PKNOX1P55347 MIR517C-201ENST00000385103 95 ntBASIC1.48□□□□□ -2.17
PKNOX1P55347 SNORA26.9-201ENST00000391322 122 ntBASIC1.48□□□□□ -2.17
PKNOX1P55347 MTCO3P40-201ENST00000392516 676 ntBASIC1.48□□□□□ -2.17
PKNOX1P55347 AC007098.1-201ENST00000420122 367 ntBASIC1.48□□□□□ -2.17
PKNOX1P55347 TIMM9P3-201ENST00000428659 274 ntBASIC1.48□□□□□ -2.17
PKNOX1P55347 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.48□□□□□ -2.17
PKNOX1P55347 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.48□□□□□ -2.17
PKNOX1P55347 MTND1P29-201ENST00000448112 647 ntBASIC1.48□□□□□ -2.17
PKNOX1P55347 MTND3P16-201ENST00000452205 344 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms