Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.7□□□□□ -1.98
PMS2P54278 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.7□□□□□ -1.98
PMS2P54278 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.7□□□□□ -1.98
PMS2P54278 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PMS2P54278 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.7□□□□□ -1.98
PMS2P54278 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.7□□□□□ -1.98
PMS2P54278 AC108938.1-201ENST00000451204 136 ntBASIC2.7□□□□□ -1.98
PMS2P54278 FO393415.2-201ENST00000480085 343 ntBASIC2.7□□□□□ -1.98
PMS2P54278 RPL36AP48-201ENST00000485521 314 ntBASIC2.7□□□□□ -1.98
PMS2P54278 RNU6-120P-201ENST00000516077 103 ntBASIC2.7□□□□□ -1.98
PMS2P54278 SCARNA3-201ENST00000517097 143 ntBASIC2.7□□□□□ -1.98
PMS2P54278 SNORD116.3-201ENST00000517176 78 ntBASIC2.7□□□□□ -1.98
PMS2P54278 SNORA31.23-201ENST00000517219 133 ntBASIC2.7□□□□□ -1.98
PMS2P54278 AL158827.2-201ENST00000602494 330 ntBASIC2.7□□□□□ -1.98
PMS2P54278 AL691447.3-201ENST00000635020 330 ntBASIC2.7□□□□□ -1.98
PMS2P54278 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.7□□□□□ -1.98
PMS2P54278 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PMS2P54278 AC080128.1-201ENST00000474389 1917 ntBASIC2.7□□□□□ -1.98
PMS2P54278 MTND5P9-201ENST00000503854 1755 ntBASIC2.69□□□□□ -1.98
PMS2P54278 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.69□□□□□ -1.98
PMS2P54278 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PMS2P54278 Y_RNA.80-201ENST00000362996 102 ntBASIC2.69□□□□□ -1.98
PMS2P54278 Y_RNA.533-201ENST00000384596 114 ntBASIC2.69□□□□□ -1.98
PMS2P54278 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
PMS2P54278 RNU6-1328P-201ENST00000410938 106 ntBASIC2.69□□□□□ -1.98
PMS2P54278 OOSP1P1-201ENST00000423265 274 ntBASIC2.69□□□□□ -1.98
PMS2P54278 MTND3P9-201ENST00000429526 346 ntBASIC2.69□□□□□ -1.98
PMS2P54278 RPL23AP50-201ENST00000434149 455 ntBASIC2.69□□□□□ -1.98
PMS2P54278 CR769767.1-201ENST00000436337 346 ntBASIC2.69□□□□□ -1.98
PMS2P54278 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.69□□□□□ -1.98
PMS2P54278 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.69□□□□□ -1.98
PMS2P54278 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.69□□□□□ -1.98
PMS2P54278 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.69□□□□□ -1.98
PMS2P54278 HMGN1P10-201ENST00000474557 553 ntBASIC2.69□□□□□ -1.98
PMS2P54278 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.69□□□□□ -1.98
PMS2P54278 RPL23AP49-201ENST00000492925 468 ntBASIC2.69□□□□□ -1.98
PMS2P54278 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.69□□□□□ -1.98
PMS2P54278 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.69□□□□□ -1.98
PMS2P54278 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PMS2P54278 CKS1BP7-201ENST00000522230 235 ntBASIC2.69□□□□□ -1.98
PMS2P54278 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.69□□□□□ -1.98
PMS2P54278 MIR3117-201ENST00000584034 78 ntBASIC2.69□□□□□ -1.98
PMS2P54278 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.69□□□□□ -1.98
PMS2P54278 AC241585.2-209ENST00000638217 143 ntBASIC2.69□□□□□ -1.98
PMS2P54278 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
PMS2P54278 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
PMS2P54278 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PMS2P54278 SNORD32A-201ENST00000364805 84 ntBASIC2.68□□□□□ -1.98
PMS2P54278 BTF3L4P2-201ENST00000392798 346 ntBASIC2.68□□□□□ -1.98
PMS2P54278 MRPL42P3-201ENST00000401492 326 ntBASIC2.68□□□□□ -1.98
PMS2P54278 RNA5SP390-201ENST00000410191 113 ntBASIC2.68□□□□□ -1.98
PMS2P54278 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.68□□□□□ -1.98
PMS2P54278 RPL23AP95-201ENST00000426806 265 ntBASIC2.68□□□□□ -1.98
PMS2P54278 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.68□□□□□ -1.98
PMS2P54278 RPS12P2-201ENST00000439728 269 ntBASIC2.68□□□□□ -1.98
PMS2P54278 AL445687.1-201ENST00000439946 251 ntBASIC2.68□□□□□ -1.98
PMS2P54278 AL031659.1-201ENST00000447075 539 ntBASIC2.68□□□□□ -1.98
PMS2P54278 AP001025.1-201ENST00000486139 332 ntBASIC2.68□□□□□ -1.98
PMS2P54278 RPL30P10-201ENST00000488148 337 ntBASIC2.68□□□□□ -1.98
PMS2P54278 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.68□□□□□ -1.98
PMS2P54278 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.68□□□□□ -1.98
PMS2P54278 RNU6-475P-201ENST00000516073 104 ntBASIC2.68□□□□□ -1.98
PMS2P54278 RNA5SP82-201ENST00000516707 92 ntBASIC2.68□□□□□ -1.98
PMS2P54278 GNAI2P1-201ENST00000541815 315 ntBASIC2.68□□□□□ -1.98
PMS2P54278 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.68□□□□□ -1.98
PMS2P54278 MIR3199-1-201ENST00000582434 88 ntBASIC2.68□□□□□ -1.98
PMS2P54278 MIR5092-201ENST00000583139 88 ntBASIC2.68□□□□□ -1.98
PMS2P54278 RPS15AP11-201ENST00000594193 385 ntBASIC2.68□□□□□ -1.98
PMS2P54278 AL356280.1-201ENST00000603614 379 ntBASIC2.68□□□□□ -1.98
PMS2P54278 AL162730.1-201ENST00000605734 292 ntBASIC2.68□□□□□ -1.98
PMS2P54278 AC007485.1-201ENST00000616755 206 ntBASIC2.68□□□□□ -1.98
PMS2P54278 AC024581.2-201ENST00000619986 252 ntBASIC2.68□□□□□ -1.98
PMS2P54278 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.68□□□□□ -1.98
PMS2P54278 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
PMS2P54278 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
PMS2P54278 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
PMS2P54278 RBBP8P1-201ENST00000449447 1844 ntBASIC2.68□□□□□ -1.98
PMS2P54278 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PMS2P54278 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PMS2P54278 Z75746.1-201ENST00000440243 2080 ntBASIC2.67□□□□□ -1.98
PMS2P54278 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PMS2P54278 Y_RNA.48-201ENST00000362710 103 ntBASIC2.67□□□□□ -1.98
PMS2P54278 RNU6-622P-201ENST00000384272 103 ntBASIC2.67□□□□□ -1.98
PMS2P54278 AL138827.1-201ENST00000402666 306 ntBASIC2.67□□□□□ -1.98
PMS2P54278 RNU6-1156P-201ENST00000410365 100 ntBASIC2.67□□□□□ -1.98
PMS2P54278 AC097463.2-201ENST00000421074 142 ntBASIC2.67□□□□□ -1.98
PMS2P54278 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.67□□□□□ -1.98
PMS2P54278 SNORD109B-201ENST00000458961 67 ntBASIC2.67□□□□□ -1.98
PMS2P54278 SNORD109A-201ENST00000459128 67 ntBASIC2.67□□□□□ -1.98
PMS2P54278 AC023141.11-201ENST00000508864 202 ntBASIC2.67□□□□□ -1.98
PMS2P54278 SNORA31.11-201ENST00000516528 139 ntBASIC2.67□□□□□ -1.98
PMS2P54278 RNU4-77P-201ENST00000516692 156 ntBASIC2.67□□□□□ -1.98
PMS2P54278 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.67□□□□□ -1.98
PMS2P54278 AC079598.5-201ENST00000547460 117 ntBASIC2.67□□□□□ -1.98
PMS2P54278 AC006157.1-201ENST00000611750 366 ntBASIC2.67□□□□□ -1.98
PMS2P54278 HMGB1P24-202ENST00000615653 685 ntBASIC2.67□□□□□ -1.98
PMS2P54278 AL449363.1-201ENST00000617815 186 ntBASIC2.67□□□□□ -1.98
PMS2P54278 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.67□□□□□ -1.98
PMS2P54278 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
PMS2P54278 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 184.5 ms