Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AL353777.1-201ENST00000425552 326 ntBASIC0.41□□□□□ -2.34
NUP98P52948 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.41□□□□□ -2.34
NUP98P52948 AC090517.1-201ENST00000569307 266 ntBASIC0.41□□□□□ -2.34
NUP98P52948 MIR4514-201ENST00000581410 57 ntBASIC0.41□□□□□ -2.34
NUP98P52948 AC022432.1-201ENST00000595739 310 ntBASIC0.41□□□□□ -2.34
NUP98P52948 DEFB131E-202ENST00000602581 683 ntBASIC0.41□□□□□ -2.34
NUP98P52948 RMST_7.1-201ENST00000621935 268 ntBASIC0.41□□□□□ -2.34
NUP98P52948 RNU6-222P-201ENST00000362438 107 ntBASIC0.41□□□□□ -2.34
NUP98P52948 SNORA63.3-201ENST00000362682 132 ntBASIC0.41□□□□□ -2.34
NUP98P52948 SNORD32B-201ENST00000364460 84 ntBASIC0.41□□□□□ -2.34
NUP98P52948 SNORD31B-201ENST00000364977 69 ntBASIC0.41□□□□□ -2.34
NUP98P52948 RNU6-418P-201ENST00000384035 107 ntBASIC0.41□□□□□ -2.34
NUP98P52948 MIR942-201ENST00000401111 86 ntBASIC0.41□□□□□ -2.34
NUP98P52948 AC060773.1-201ENST00000421698 310 ntBASIC0.41□□□□□ -2.34
NUP98P52948 BTBD7P2-201ENST00000441962 620 ntBASIC0.41□□□□□ -2.34
NUP98P52948 MTND5P2-201ENST00000442927 1142 ntBASIC0.41□□□□□ -2.34
NUP98P52948 AL162395.1-201ENST00000457882 422 ntBASIC0.41□□□□□ -2.34
NUP98P52948 RPL39P38-201ENST00000467018 153 ntBASIC0.41□□□□□ -2.34
NUP98P52948 PDCD5P2-201ENST00000507570 312 ntBASIC0.41□□□□□ -2.34
NUP98P52948 AL590705.4-201ENST00000532209 134 ntBASIC0.41□□□□□ -2.34
NUP98P52948 AC023050.2-201ENST00000544968 387 ntBASIC0.41□□□□□ -2.34
NUP98P52948 AC012507.3-201ENST00000603556 477 ntBASIC0.41□□□□□ -2.34
NUP98P52948 AC131235.4-201ENST00000609288 620 ntBASIC0.41□□□□□ -2.34
NUP98P52948 GHRLOS.1-201ENST00000610995 70 ntBASIC0.41□□□□□ -2.34
NUP98P52948 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
NUP98P52948 RNU6-1123P-201ENST00000362347 106 ntBASIC0.4□□□□□ -2.35
NUP98P52948 RNU6-511P-201ENST00000363496 107 ntBASIC0.4□□□□□ -2.35
NUP98P52948 RNU6-1141P-201ENST00000364520 107 ntBASIC0.4□□□□□ -2.35
NUP98P52948 RNU6-384P-201ENST00000364900 104 ntBASIC0.4□□□□□ -2.35
NUP98P52948 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
NUP98P52948 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.4□□□□□ -2.35
NUP98P52948 AC137499.1-201ENST00000427602 88 ntBASIC0.4□□□□□ -2.35
NUP98P52948 USP9YP14-201ENST00000430663 563 ntBASIC0.4□□□□□ -2.35
NUP98P52948 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.4□□□□□ -2.35
NUP98P52948 RNU7-14P-201ENST00000459331 62 ntBASIC0.4□□□□□ -2.35
NUP98P52948 COX6CP6-201ENST00000490840 228 ntBASIC0.4□□□□□ -2.35
NUP98P52948 SNORA31.2-201ENST00000516019 134 ntBASIC0.4□□□□□ -2.35
NUP98P52948 SNORD79.1-201ENST00000516069 84 ntBASIC0.4□□□□□ -2.35
NUP98P52948 AC107934.1-201ENST00000522215 217 ntBASIC0.4□□□□□ -2.35
NUP98P52948 AP003327.1-201ENST00000529684 127 ntBASIC0.4□□□□□ -2.35
NUP98P52948 AC018659.1-201ENST00000551083 169 ntBASIC0.4□□□□□ -2.35
NUP98P52948 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.4□□□□□ -2.35
NUP98P52948 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.4□□□□□ -2.35
NUP98P52948 AL513534.2-201ENST00000603836 250 ntBASIC0.4□□□□□ -2.35
NUP98P52948 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
NUP98P52948 RNU6-35P-201ENST00000384530 107 ntBASIC0.39□□□□□ -2.35
NUP98P52948 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.39□□□□□ -2.35
NUP98P52948 RPS20P2-201ENST00000402520 389 ntBASIC0.39□□□□□ -2.35
NUP98P52948 HIGD1AP15-201ENST00000416198 280 ntBASIC0.39□□□□□ -2.35
NUP98P52948 AC244670.1-201ENST00000436879 112 ntBASIC0.39□□□□□ -2.35
NUP98P52948 SNORD124-201ENST00000459577 104 ntBASIC0.39□□□□□ -2.35
NUP98P52948 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.39□□□□□ -2.35
NUP98P52948 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.39□□□□□ -2.35
NUP98P52948 TMF1P1-201ENST00000576058 373 ntBASIC0.39□□□□□ -2.35
NUP98P52948 Z83818.1-201ENST00000603584 150 ntBASIC0.39□□□□□ -2.35
NUP98P52948 AC121334.2-201ENST00000605387 271 ntBASIC0.39□□□□□ -2.35
NUP98P52948 AL451064.1-201ENST00000607718 471 ntBASIC0.39□□□□□ -2.35
NUP98P52948 RNU2-3P-201ENST00000410144 191 ntBASIC0.38□□□□□ -2.35
NUP98P52948 RNU2-39P-201ENST00000410604 198 ntBASIC0.38□□□□□ -2.35
NUP98P52948 AC244023.1-201ENST00000426884 112 ntBASIC0.38□□□□□ -2.35
NUP98P52948 MTCYBP39-201ENST00000437562 491 ntBASIC0.38□□□□□ -2.35
NUP98P52948 MTCO3P18-201ENST00000440206 761 ntBASIC0.38□□□□□ -2.35
NUP98P52948 AC016925.1-201ENST00000458303 298 ntBASIC0.38□□□□□ -2.35
NUP98P52948 MTCO3P7-201ENST00000510008 774 ntBASIC0.38□□□□□ -2.35
NUP98P52948 RNU4-57P-201ENST00000515980 135 ntBASIC0.38□□□□□ -2.35
NUP98P52948 AC242498.1-201ENST00000604134 111 ntBASIC0.38□□□□□ -2.35
NUP98P52948 AL034555.1-201ENST00000604816 211 ntBASIC0.38□□□□□ -2.35
NUP98P52948 AL353149.1-201ENST00000610667 244 ntBASIC0.38□□□□□ -2.35
NUP98P52948 AC243994.1-201ENST00000618627 109 ntBASIC0.38□□□□□ -2.35
NUP98P52948 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.38□□□□□ -2.35
NUP98P52948 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
NUP98P52948 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.38□□□□□ -2.35
NUP98P52948 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.38□□□□□ -2.35
NUP98P52948 MTCYBP2-201ENST00000407745 171 ntBASIC0.38□□□□□ -2.35
NUP98P52948 RPL22P18-201ENST00000417197 377 ntBASIC0.38□□□□□ -2.35
NUP98P52948 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.38□□□□□ -2.35
NUP98P52948 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.38□□□□□ -2.35
NUP98P52948 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.38□□□□□ -2.35
NUP98P52948 USP9YP11-201ENST00000427537 717 ntBASIC0.38□□□□□ -2.35
NUP98P52948 AC078809.1-201ENST00000427601 140 ntBASIC0.38□□□□□ -2.35
NUP98P52948 AC002486.1-201ENST00000435098 391 ntBASIC0.38□□□□□ -2.35
NUP98P52948 GAPDHP17-201ENST00000449858 1001 ntBASIC0.38□□□□□ -2.35
NUP98P52948 AC010531.2-201ENST00000465012 153 ntBASIC0.38□□□□□ -2.35
NUP98P52948 AC011406.1-201ENST00000512440 370 ntBASIC0.38□□□□□ -2.35
NUP98P52948 LRRC34P2-201ENST00000514850 553 ntBASIC0.38□□□□□ -2.35
NUP98P52948 RNU6-197P-201ENST00000516680 100 ntBASIC0.38□□□□□ -2.35
NUP98P52948 RNU6-201P-201ENST00000517100 61 ntBASIC0.38□□□□□ -2.35
NUP98P52948 AC011979.2-201ENST00000527568 352 ntBASIC0.38□□□□□ -2.35
NUP98P52948 AC090888.2-201ENST00000559765 1144 ntBASIC0.38□□□□□ -2.35
NUP98P52948 AC105148.1-201ENST00000604961 409 ntBASIC0.38□□□□□ -2.35
NUP98P52948 RPL17P51-201ENST00000605218 238 ntBASIC0.38□□□□□ -2.35
NUP98P52948 AL592221.1-201ENST00000605266 382 ntBASIC0.38□□□□□ -2.35
NUP98P52948 RNU6-78P-201ENST00000362897 107 ntBASIC0.37□□□□□ -2.35
NUP98P52948 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
NUP98P52948 RNU6-331P-201ENST00000384724 107 ntBASIC0.37□□□□□ -2.35
NUP98P52948 AL358794.1-201ENST00000445689 381 ntBASIC0.37□□□□□ -2.35
NUP98P52948 AC116353.3-201ENST00000511215 249 ntBASIC0.37□□□□□ -2.35
NUP98P52948 AC010587.2-201ENST00000511727 448 ntBASIC0.37□□□□□ -2.35
NUP98P52948 RNU4-54P-201ENST00000516428 129 ntBASIC0.37□□□□□ -2.35
NUP98P52948 RNU6-1098P-201ENST00000516772 96 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms