Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP11P51784 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
USP11P51784 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP11P51784 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.99□□□□□ -1.77
USP11P51784 MTND5P35-201ENST00000557537 1720 ntBASIC3.99□□□□□ -1.77
USP11P51784 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
USP11P51784 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.99□□□□□ -1.77
USP11P51784 Y_RNA.182-201ENST00000363880 111 ntBASIC3.99□□□□□ -1.77
USP11P51784 RNU6-1141P-201ENST00000364520 107 ntBASIC3.99□□□□□ -1.77
USP11P51784 SNORA72.2-201ENST00000365028 127 ntBASIC3.99□□□□□ -1.77
USP11P51784 RNU1-73P-201ENST00000383971 164 ntBASIC3.99□□□□□ -1.77
USP11P51784 RNU6-217P-201ENST00000384164 104 ntBASIC3.99□□□□□ -1.77
USP11P51784 MIR549A-201ENST00000385268 96 ntBASIC3.99□□□□□ -1.77
USP11P51784 RN7SKP61-201ENST00000410642 295 ntBASIC3.99□□□□□ -1.77
USP11P51784 AC093578.1-201ENST00000415219 368 ntBASIC3.99□□□□□ -1.77
USP11P51784 AC112220.1-201ENST00000434628 355 ntBASIC3.99□□□□□ -1.77
USP11P51784 RPS29P31-201ENST00000446147 164 ntBASIC3.99□□□□□ -1.77
USP11P51784 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.99□□□□□ -1.77
USP11P51784 RPL30P12-201ENST00000474666 353 ntBASIC3.99□□□□□ -1.77
USP11P51784 AC005840.1-201ENST00000498412 377 ntBASIC3.99□□□□□ -1.77
USP11P51784 AC026333.2-201ENST00000542164 106 ntBASIC3.99□□□□□ -1.77
USP11P51784 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.99□□□□□ -1.77
USP11P51784 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.99□□□□□ -1.77
USP11P51784 U3.45-201ENST00000607547 219 ntBASIC3.99□□□□□ -1.77
USP11P51784 AC068831.7-201ENST00000616954 363 ntBASIC3.99□□□□□ -1.77
USP11P51784 XIST_intron.1-201ENST00000619444 68 ntBASIC3.99□□□□□ -1.77
USP11P51784 U4.6-201ENST00000621618 127 ntBASIC3.99□□□□□ -1.77
USP11P51784 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.99□□□□□ -1.77
USP11P51784 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.99□□□□□ -1.77
USP11P51784 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
USP11P51784 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP11P51784 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP11P51784 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.99□□□□□ -1.77
USP11P51784 AC073073.2-201ENST00000609827 2578 ntBASIC3.99□□□□□ -1.77
USP11P51784 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
USP11P51784 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
USP11P51784 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
USP11P51784 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
USP11P51784 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
USP11P51784 Y_RNA.121-201ENST00000363309 113 ntBASIC3.98□□□□□ -1.77
USP11P51784 Y_RNA.353-201ENST00000365440 108 ntBASIC3.98□□□□□ -1.77
USP11P51784 RNU2-37P-201ENST00000410695 177 ntBASIC3.98□□□□□ -1.77
USP11P51784 RAB28P5-201ENST00000427490 651 ntBASIC3.98□□□□□ -1.77
USP11P51784 AC114982.1-201ENST00000469402 321 ntBASIC3.98□□□□□ -1.77
USP11P51784 AL121594.1-201ENST00000475906 575 ntBASIC3.98□□□□□ -1.77
USP11P51784 AC016632.1-201ENST00000503994 196 ntBASIC3.98□□□□□ -1.77
USP11P51784 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.98□□□□□ -1.77
USP11P51784 MIR3690-201ENST00000580266 75 ntBASIC3.98□□□□□ -1.77
USP11P51784 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.98□□□□□ -1.77
USP11P51784 AC019176.2-201ENST00000611579 315 ntBASIC3.98□□□□□ -1.77
USP11P51784 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
USP11P51784 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.98□□□□□ -1.77
USP11P51784 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
USP11P51784 AC091152.2-201ENST00000591628 2569 ntBASIC3.98□□□□□ -1.77
USP11P51784 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.98□□□□□ -1.77
USP11P51784 AL133383.2-201ENST00000622958 2336 ntBASIC3.98□□□□□ -1.77
USP11P51784 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
USP11P51784 AC068700.1-201ENST00000565862 3754 ntBASIC3.98□□□□□ -1.77
USP11P51784 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.97□□□□□ -1.77
USP11P51784 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.97□□□□□ -1.77
USP11P51784 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.97□□□□□ -1.77
USP11P51784 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
USP11P51784 RNU6-1285P-201ENST00000363480 105 ntBASIC3.97□□□□□ -1.77
USP11P51784 Y_RNA.357-201ENST00000365487 109 ntBASIC3.97□□□□□ -1.77
USP11P51784 RNU6-44P-201ENST00000384045 107 ntBASIC3.97□□□□□ -1.77
USP11P51784 MIR493-201ENST00000385254 89 ntBASIC3.97□□□□□ -1.77
USP11P51784 AC008267.6-201ENST00000441664 139 ntBASIC3.97□□□□□ -1.77
USP11P51784 AC125238.1-201ENST00000448842 249 ntBASIC3.97□□□□□ -1.77
USP11P51784 PRSS3P4-201ENST00000453323 162 ntBASIC3.97□□□□□ -1.77
USP11P51784 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.97□□□□□ -1.77
USP11P51784 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.97□□□□□ -1.77
USP11P51784 RNU7-121P-201ENST00000516604 62 ntBASIC3.97□□□□□ -1.77
USP11P51784 RNA5SP54-201ENST00000516951 92 ntBASIC3.97□□□□□ -1.77
USP11P51784 MIR4738-201ENST00000579134 87 ntBASIC3.97□□□□□ -1.77
USP11P51784 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.97□□□□□ -1.77
USP11P51784 AC012468.1-201ENST00000604888 430 ntBASIC3.97□□□□□ -1.77
USP11P51784 AC012314.7-201ENST00000619693 93 ntBASIC3.97□□□□□ -1.77
USP11P51784 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP11P51784 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP11P51784 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.96□□□□□ -1.77
USP11P51784 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
USP11P51784 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
USP11P51784 AP001486.2-201ENST00000561652 5113 ntBASIC3.96□□□□□ -1.78
USP11P51784 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
USP11P51784 AC010332.2-201ENST00000613083 1904 ntBASIC3.96□□□□□ -1.78
USP11P51784 Y_RNA.498-201ENST00000384460 102 ntBASIC3.96□□□□□ -1.78
USP11P51784 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.96□□□□□ -1.78
USP11P51784 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.96□□□□□ -1.78
USP11P51784 RPL23AP83-201ENST00000434984 473 ntBASIC3.96□□□□□ -1.78
USP11P51784 U8.19-201ENST00000459095 133 ntBASIC3.96□□□□□ -1.78
USP11P51784 RN7SL293P-201ENST00000481765 281 ntBASIC3.96□□□□□ -1.78
USP11P51784 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.96□□□□□ -1.78
USP11P51784 RNU6-155P-201ENST00000516347 100 ntBASIC3.96□□□□□ -1.78
USP11P51784 RNA5SP468-201ENST00000516782 93 ntBASIC3.96□□□□□ -1.78
USP11P51784 DEFB131C-201ENST00000528817 165 ntBASIC3.96□□□□□ -1.78
USP11P51784 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.96□□□□□ -1.78
USP11P51784 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.96□□□□□ -1.78
USP11P51784 MIR3684-201ENST00000579779 74 ntBASIC3.96□□□□□ -1.78
USP11P51784 AL359198.2-201ENST00000611836 194 ntBASIC3.96□□□□□ -1.78
USP11P51784 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms