Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 Y_RNA.706-201ENST00000516933 99 ntBASIC3.52□□□□□ -1.85
MRE11P49959 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.52□□□□□ -1.85
MRE11P49959 AP004607.1-201ENST00000524456 203 ntBASIC3.52□□□□□ -1.85
MRE11P49959 GTF3AP2-201ENST00000557014 266 ntBASIC3.52□□□□□ -1.85
MRE11P49959 LINC00933-203ENST00000559812 219 ntBASIC3.52□□□□□ -1.85
MRE11P49959 AL109918.3-201ENST00000603072 338 ntBASIC3.52□□□□□ -1.85
MRE11P49959 AL355877.2-201ENST00000603670 358 ntBASIC3.52□□□□□ -1.85
MRE11P49959 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.52□□□□□ -1.85
MRE11P49959 uc_338.25-201ENST00000613756 156 ntBASIC3.52□□□□□ -1.85
MRE11P49959 AC097372.5-201ENST00000623665 376 ntBASIC3.52□□□□□ -1.85
MRE11P49959 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.52□□□□□ -1.85
MRE11P49959 U6.92-201ENST00000636464 89 ntBASIC3.52□□□□□ -1.85
MRE11P49959 AC241585.2-209ENST00000638217 143 ntBASIC3.52□□□□□ -1.85
MRE11P49959 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
MRE11P49959 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
MRE11P49959 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MRE11P49959 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.51□□□□□ -1.85
MRE11P49959 RNU6-212P-201ENST00000362642 104 ntBASIC3.51□□□□□ -1.85
MRE11P49959 RNU6-942P-201ENST00000363002 107 ntBASIC3.51□□□□□ -1.85
MRE11P49959 RNA5SP139-201ENST00000364340 117 ntBASIC3.51□□□□□ -1.85
MRE11P49959 RNU6-898P-201ENST00000365627 104 ntBASIC3.51□□□□□ -1.85
MRE11P49959 RNA5SP38-201ENST00000410750 119 ntBASIC3.51□□□□□ -1.85
MRE11P49959 RNU4-47P-201ENST00000410876 114 ntBASIC3.51□□□□□ -1.85
MRE11P49959 AL358453.1-201ENST00000422522 250 ntBASIC3.51□□□□□ -1.85
MRE11P49959 Z82188.1-201ENST00000436709 154 ntBASIC3.51□□□□□ -1.85
MRE11P49959 AC098831.1-201ENST00000440661 216 ntBASIC3.51□□□□□ -1.85
MRE11P49959 AC124916.1-201ENST00000444020 547 ntBASIC3.51□□□□□ -1.85
MRE11P49959 RPL23AP49-201ENST00000492925 468 ntBASIC3.51□□□□□ -1.85
MRE11P49959 IGKV2-26-201ENST00000518305 343 ntBASIC3.51□□□□□ -1.85
MRE11P49959 AP002770.2-201ENST00000543613 532 ntBASIC3.51□□□□□ -1.85
MRE11P49959 AC007375.1-201ENST00000554513 578 ntBASIC3.51□□□□□ -1.85
MRE11P49959 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.51□□□□□ -1.85
MRE11P49959 AC012433.1-201ENST00000588916 398 ntBASIC3.51□□□□□ -1.85
MRE11P49959 Z83843.1-201ENST00000604070 3685 ntBASIC3.5□□□□□ -1.85
MRE11P49959 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.5□□□□□ -1.85
MRE11P49959 Y_RNA.40-201ENST00000362645 93 ntBASIC3.5□□□□□ -1.85
MRE11P49959 Y_RNA.84-201ENST00000363011 104 ntBASIC3.5□□□□□ -1.85
MRE11P49959 RNU6-527P-201ENST00000363425 104 ntBASIC3.5□□□□□ -1.85
MRE11P49959 RNU2-25P-201ENST00000411041 191 ntBASIC3.5□□□□□ -1.85
MRE11P49959 RNU2-64P-201ENST00000411315 191 ntBASIC3.5□□□□□ -1.85
MRE11P49959 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.5□□□□□ -1.85
MRE11P49959 SDAD1P3-201ENST00000427380 333 ntBASIC3.5□□□□□ -1.85
MRE11P49959 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.5□□□□□ -1.85
MRE11P49959 AC006026.2-201ENST00000457376 180 ntBASIC3.5□□□□□ -1.85
MRE11P49959 U8.22-201ENST00000459141 133 ntBASIC3.5□□□□□ -1.85
MRE11P49959 RN7SL297P-201ENST00000483161 293 ntBASIC3.5□□□□□ -1.85
MRE11P49959 ANXA2P1-201ENST00000505539 926 ntBASIC3.5□□□□□ -1.85
MRE11P49959 MRPS36P4-201ENST00000534436 298 ntBASIC3.5□□□□□ -1.85
MRE11P49959 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.5□□□□□ -1.85
MRE11P49959 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
MRE11P49959 AC022336.2-201ENST00000568966 2538 ntBASIC3.5□□□□□ -1.85
MRE11P49959 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.5□□□□□ -1.85
MRE11P49959 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
MRE11P49959 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
MRE11P49959 AC009541.1-201ENST00000438279 2662 ntBASIC3.49□□□□□ -1.85
MRE11P49959 AC233981.2-201ENST00000611524 1614 ntBASIC3.49□□□□□ -1.85
MRE11P49959 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.49□□□□□ -1.85
MRE11P49959 RNU4-9P-201ENST00000364951 139 ntBASIC3.49□□□□□ -1.85
MRE11P49959 RNU1-73P-201ENST00000383971 164 ntBASIC3.49□□□□□ -1.85
MRE11P49959 RNU6-1027P-201ENST00000383998 107 ntBASIC3.49□□□□□ -1.85
MRE11P49959 Y_RNA.478-201ENST00000384358 107 ntBASIC3.49□□□□□ -1.85
MRE11P49959 RNY3P4-201ENST00000384428 101 ntBASIC3.49□□□□□ -1.85
MRE11P49959 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
MRE11P49959 RNU6-1203P-201ENST00000410703 110 ntBASIC3.49□□□□□ -1.85
MRE11P49959 RPL26P27-201ENST00000414397 437 ntBASIC3.49□□□□□ -1.85
MRE11P49959 HMGN2P30-201ENST00000423237 256 ntBASIC3.49□□□□□ -1.85
MRE11P49959 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
MRE11P49959 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.49□□□□□ -1.85
MRE11P49959 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.49□□□□□ -1.85
MRE11P49959 TOMM22P6-201ENST00000465035 409 ntBASIC3.49□□□□□ -1.85
MRE11P49959 MIR2355-201ENST00000517199 87 ntBASIC3.49□□□□□ -1.85
MRE11P49959 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.49□□□□□ -1.85
MRE11P49959 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.49□□□□□ -1.85
MRE11P49959 AC010928.2-201ENST00000588017 287 ntBASIC3.49□□□□□ -1.85
MRE11P49959 AC073410.2-201ENST00000603240 332 ntBASIC3.49□□□□□ -1.85
MRE11P49959 AP001282.2-201ENST00000616149 309 ntBASIC3.49□□□□□ -1.85
MRE11P49959 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.49□□□□□ -1.85
MRE11P49959 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
MRE11P49959 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
MRE11P49959 MAPK10-322ENST00000641485 4530 ntBASIC3.48□□□□□ -1.85
MRE11P49959 GABRG2-229ENST00000641017 3628 ntBASIC3.48□□□□□ -1.85
MRE11P49959 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
MRE11P49959 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
MRE11P49959 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
MRE11P49959 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
MRE11P49959 RNU6-799P-201ENST00000363567 107 ntBASIC3.48□□□□□ -1.85
MRE11P49959 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.48□□□□□ -1.85
MRE11P49959 Y_RNA.466-201ENST00000384294 113 ntBASIC3.48□□□□□ -1.85
MRE11P49959 MIR215-201ENST00000384858 110 ntBASIC3.48□□□□□ -1.85
MRE11P49959 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.48□□□□□ -1.85
MRE11P49959 MIR548I3-201ENST00000408378 149 ntBASIC3.48□□□□□ -1.85
MRE11P49959 MIR548I1-201ENST00000408810 149 ntBASIC3.48□□□□□ -1.85
MRE11P49959 snoU13.30-201ENST00000458951 104 ntBASIC3.48□□□□□ -1.85
MRE11P49959 RN7SKP282-201ENST00000516824 299 ntBASIC3.48□□□□□ -1.85
MRE11P49959 RNU6-826P-201ENST00000516827 104 ntBASIC3.48□□□□□ -1.85
MRE11P49959 AC090617.3-201ENST00000573670 475 ntBASIC3.48□□□□□ -1.85
MRE11P49959 MIR2682-201ENST00000580305 110 ntBASIC3.48□□□□□ -1.85
MRE11P49959 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
MRE11P49959 SCARNA4-201ENST00000629045 128 ntBASIC3.48□□□□□ -1.85
MRE11P49959 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms