Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 RPL23AP88-201ENST00000605759 454 ntBASIC3.06□□□□□ -1.92
CLK3P49761 AC037487.3-201ENST00000606668 112 ntBASIC3.06□□□□□ -1.92
CLK3P49761 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.06□□□□□ -1.92
CLK3P49761 AC012314.7-201ENST00000619693 93 ntBASIC3.06□□□□□ -1.92
CLK3P49761 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.06□□□□□ -1.92
CLK3P49761 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.06□□□□□ -1.92
CLK3P49761 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLK3P49761 RNU6-1020P-201ENST00000363684 107 ntBASIC3.05□□□□□ -1.92
CLK3P49761 Y_RNA.292-201ENST00000364904 97 ntBASIC3.05□□□□□ -1.92
CLK3P49761 RNU6-1286P-201ENST00000383871 107 ntBASIC3.05□□□□□ -1.92
CLK3P49761 RNY1P5-201ENST00000383890 115 ntBASIC3.05□□□□□ -1.92
CLK3P49761 RNU6-318P-201ENST00000384283 103 ntBASIC3.05□□□□□ -1.92
CLK3P49761 SNORA26.7-201ENST00000391288 122 ntBASIC3.05□□□□□ -1.92
CLK3P49761 BPY2DP-201ENST00000422208 265 ntBASIC3.05□□□□□ -1.92
CLK3P49761 MTCO1P5-201ENST00000433573 344 ntBASIC3.05□□□□□ -1.92
CLK3P49761 CST9LP2-201ENST00000437612 320 ntBASIC3.05□□□□□ -1.92
CLK3P49761 RPS15AP7-201ENST00000439294 405 ntBASIC3.05□□□□□ -1.92
CLK3P49761 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.05□□□□□ -1.92
CLK3P49761 AC109925.1-201ENST00000478069 331 ntBASIC3.05□□□□□ -1.92
CLK3P49761 RNU6-1278P-201ENST00000516130 107 ntBASIC3.05□□□□□ -1.92
CLK3P49761 SNORA31.26-201ENST00000517250 137 ntBASIC3.05□□□□□ -1.92
CLK3P49761 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.05□□□□□ -1.92
CLK3P49761 MIR548AI-201ENST00000579940 88 ntBASIC3.05□□□□□ -1.92
CLK3P49761 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.05□□□□□ -1.92
CLK3P49761 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.05□□□□□ -1.92
CLK3P49761 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.05□□□□□ -1.92
CLK3P49761 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CLK3P49761 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.05□□□□□ -1.92
CLK3P49761 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.05□□□□□ -1.92
CLK3P49761 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CLK3P49761 RNU1-33P-201ENST00000364249 162 ntBASIC3.04□□□□□ -1.92
CLK3P49761 RNU6-740P-201ENST00000364734 105 ntBASIC3.04□□□□□ -1.92
CLK3P49761 RNU6-926P-201ENST00000384075 107 ntBASIC3.04□□□□□ -1.92
CLK3P49761 RNU6-843P-201ENST00000384454 104 ntBASIC3.04□□□□□ -1.92
CLK3P49761 MIR183-201ENST00000384958 110 ntBASIC3.04□□□□□ -1.92
CLK3P49761 MIR153-2-201ENST00000385225 87 ntBASIC3.04□□□□□ -1.92
CLK3P49761 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CLK3P49761 RNU1-139P-201ENST00000391307 165 ntBASIC3.04□□□□□ -1.92
CLK3P49761 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.04□□□□□ -1.92
CLK3P49761 RNU5A-5P-201ENST00000411054 116 ntBASIC3.04□□□□□ -1.92
CLK3P49761 RPL32P35-201ENST00000415214 394 ntBASIC3.04□□□□□ -1.92
CLK3P49761 EIF1AXP1-201ENST00000419267 435 ntBASIC3.04□□□□□ -1.92
CLK3P49761 AC006028.1-201ENST00000438379 402 ntBASIC3.04□□□□□ -1.92
CLK3P49761 AL353705.4-201ENST00000449661 238 ntBASIC3.04□□□□□ -1.92
CLK3P49761 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.04□□□□□ -1.92
CLK3P49761 AC006026.2-201ENST00000457376 180 ntBASIC3.04□□□□□ -1.92
CLK3P49761 RN7SL75P-201ENST00000461926 281 ntBASIC3.04□□□□□ -1.92
CLK3P49761 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.04□□□□□ -1.92
CLK3P49761 AC074198.2-201ENST00000508153 258 ntBASIC3.04□□□□□ -1.92
CLK3P49761 RNU6-1114P-201ENST00000516022 107 ntBASIC3.04□□□□□ -1.92
CLK3P49761 AK6P2-201ENST00000549020 471 ntBASIC3.04□□□□□ -1.92
CLK3P49761 LINC00933-203ENST00000559812 219 ntBASIC3.04□□□□□ -1.92
CLK3P49761 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.04□□□□□ -1.92
CLK3P49761 CYCSP39-201ENST00000565821 309 ntBASIC3.04□□□□□ -1.92
CLK3P49761 MIR4423-201ENST00000580922 80 ntBASIC3.04□□□□□ -1.92
CLK3P49761 MIR3944-201ENST00000581277 108 ntBASIC3.04□□□□□ -1.92
CLK3P49761 MIR4444-1-201ENST00000581696 74 ntBASIC3.04□□□□□ -1.92
CLK3P49761 MIR4444-2-201ENST00000584390 74 ntBASIC3.04□□□□□ -1.92
CLK3P49761 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.04□□□□□ -1.92
CLK3P49761 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLK3P49761 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.04□□□□□ -1.92
CLK3P49761 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.04□□□□□ -1.92
CLK3P49761 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLK3P49761 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CLK3P49761 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.04□□□□□ -1.92
CLK3P49761 AC110491.1-201ENST00000562191 2010 ntBASIC3.03□□□□□ -1.92
CLK3P49761 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLK3P49761 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.03□□□□□ -1.92
CLK3P49761 RNU1-70P-201ENST00000362618 164 ntBASIC3.03□□□□□ -1.92
CLK3P49761 Y_RNA.170-201ENST00000363746 110 ntBASIC3.03□□□□□ -1.92
CLK3P49761 RNU6-879P-201ENST00000364328 108 ntBASIC3.03□□□□□ -1.92
CLK3P49761 SNORA51.4-201ENST00000364993 124 ntBASIC3.03□□□□□ -1.92
CLK3P49761 RNU6-47P-201ENST00000383866 107 ntBASIC3.03□□□□□ -1.92
CLK3P49761 Y_RNA.569-201ENST00000384749 103 ntBASIC3.03□□□□□ -1.92
CLK3P49761 MIR32-201ENST00000384965 70 ntBASIC3.03□□□□□ -1.92
CLK3P49761 MIR613-201ENST00000385248 95 ntBASIC3.03□□□□□ -1.92
CLK3P49761 RNA5SP213-201ENST00000391031 106 ntBASIC3.03□□□□□ -1.92
CLK3P49761 U3.37-201ENST00000408528 213 ntBASIC3.03□□□□□ -1.92
CLK3P49761 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.03□□□□□ -1.92
CLK3P49761 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.03□□□□□ -1.92
CLK3P49761 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.03□□□□□ -1.92
CLK3P49761 RPS29P26-201ENST00000477483 171 ntBASIC3.03□□□□□ -1.92
CLK3P49761 Y_RNA.662-201ENST00000516028 97 ntBASIC3.03□□□□□ -1.92
CLK3P49761 SNORD116-28-201ENST00000516123 91 ntBASIC3.03□□□□□ -1.92
CLK3P49761 SNORA43.2-201ENST00000516652 128 ntBASIC3.03□□□□□ -1.92
CLK3P49761 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.03□□□□□ -1.92
CLK3P49761 MIR4282-201ENST00000583613 67 ntBASIC3.03□□□□□ -1.92
CLK3P49761 AC024153.1-201ENST00000603103 365 ntBASIC3.03□□□□□ -1.92
CLK3P49761 MIR92B-201ENST00000607575 96 ntBASIC3.03□□□□□ -1.92
CLK3P49761 AC021753.1-201ENST00000635724 168 ntBASIC3.03□□□□□ -1.92
CLK3P49761 U6.106-201ENST00000636360 105 ntBASIC3.03□□□□□ -1.92
CLK3P49761 U6.105-201ENST00000637379 88 ntBASIC3.03□□□□□ -1.92
CLK3P49761 AC241585.2-209ENST00000638217 143 ntBASIC3.03□□□□□ -1.92
CLK3P49761 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.03□□□□□ -1.92
CLK3P49761 HAUS6P2-201ENST00000433254 2404 ntBASIC3.03□□□□□ -1.92
CLK3P49761 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CLK3P49761 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.03□□□□□ -1.93
CLK3P49761 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
CLK3P49761 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CLK3P49761 AL353743.1-202ENST00000431724 1695 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms