Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AL133396.1-201ENST00000432048 687 ntBASIC2.11□□□□□ -2.07
NEDD4P46934 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.11□□□□□ -2.07
NEDD4P46934 USP9YP28-201ENST00000435142 589 ntBASIC2.11□□□□□ -2.07
NEDD4P46934 IFNA20P-201ENST00000436840 528 ntBASIC2.11□□□□□ -2.07
NEDD4P46934 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.11□□□□□ -2.07
NEDD4P46934 RNU6-329P-201ENST00000459618 107 ntBASIC2.11□□□□□ -2.07
NEDD4P46934 CKS1BP2-201ENST00000497342 240 ntBASIC2.11□□□□□ -2.07
NEDD4P46934 AC108210.2-201ENST00000503681 201 ntBASIC2.11□□□□□ -2.07
NEDD4P46934 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.11□□□□□ -2.07
NEDD4P46934 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.11□□□□□ -2.07
NEDD4P46934 MIR3136-201ENST00000583498 78 ntBASIC2.11□□□□□ -2.07
NEDD4P46934 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.11□□□□□ -2.07
NEDD4P46934 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NEDD4P46934 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NEDD4P46934 AC092268.1-201ENST00000342691 405 ntBASIC2.1□□□□□ -2.07
NEDD4P46934 Y_RNA.301-201ENST00000364990 103 ntBASIC2.1□□□□□ -2.07
NEDD4P46934 RNU6-933P-201ENST00000384424 107 ntBASIC2.1□□□□□ -2.07
NEDD4P46934 MIR95-201ENST00000385072 81 ntBASIC2.1□□□□□ -2.07
NEDD4P46934 MT-TL1-201ENST00000386347 75 ntBASIC2.1□□□□□ -2.07
NEDD4P46934 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.1□□□□□ -2.07
NEDD4P46934 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.1□□□□□ -2.07
NEDD4P46934 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.1□□□□□ -2.07
NEDD4P46934 AC244670.1-201ENST00000436879 112 ntBASIC2.1□□□□□ -2.07
NEDD4P46934 AL161788.1-201ENST00000441805 169 ntBASIC2.1□□□□□ -2.07
NEDD4P46934 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NEDD4P46934 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.1□□□□□ -2.07
NEDD4P46934 AC090515.1-201ENST00000465295 476 ntBASIC2.1□□□□□ -2.07
NEDD4P46934 AC016632.1-201ENST00000503994 196 ntBASIC2.1□□□□□ -2.07
NEDD4P46934 AC107393.1-201ENST00000512403 346 ntBASIC2.1□□□□□ -2.07
NEDD4P46934 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.1□□□□□ -2.07
NEDD4P46934 RNU4-49P-201ENST00000516080 140 ntBASIC2.1□□□□□ -2.07
NEDD4P46934 RNU6-991P-201ENST00000516168 107 ntBASIC2.1□□□□□ -2.07
NEDD4P46934 AP005902.1-201ENST00000521358 186 ntBASIC2.1□□□□□ -2.07
NEDD4P46934 AC107953.1-201ENST00000522216 297 ntBASIC2.1□□□□□ -2.07
NEDD4P46934 IMMP1LP2-201ENST00000552954 492 ntBASIC2.1□□□□□ -2.07
NEDD4P46934 AL138963.2-201ENST00000605137 226 ntBASIC2.1□□□□□ -2.07
NEDD4P46934 MIR8081-201ENST00000611533 95 ntBASIC2.1□□□□□ -2.07
NEDD4P46934 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.1□□□□□ -2.07
NEDD4P46934 AC009233.1-201ENST00000616477 371 ntBASIC2.1□□□□□ -2.07
NEDD4P46934 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
NEDD4P46934 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
NEDD4P46934 RNU6-1317P-201ENST00000364582 104 ntBASIC2.09□□□□□ -2.08
NEDD4P46934 RNU6-95P-201ENST00000384697 107 ntBASIC2.09□□□□□ -2.08
NEDD4P46934 MIR29B2-201ENST00000385055 81 ntBASIC2.09□□□□□ -2.08
NEDD4P46934 RNU6-325P-201ENST00000411132 105 ntBASIC2.09□□□□□ -2.08
NEDD4P46934 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.09□□□□□ -2.08
NEDD4P46934 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.09□□□□□ -2.08
NEDD4P46934 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.09□□□□□ -2.08
NEDD4P46934 RN7SL274P-201ENST00000492268 272 ntBASIC2.09□□□□□ -2.08
NEDD4P46934 HSPE1P4-201ENST00000550617 308 ntBASIC2.09□□□□□ -2.08
NEDD4P46934 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.09□□□□□ -2.08
NEDD4P46934 MIR4419B-201ENST00000577260 68 ntBASIC2.09□□□□□ -2.08
NEDD4P46934 MIR3942-201ENST00000585264 109 ntBASIC2.09□□□□□ -2.08
NEDD4P46934 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.09□□□□□ -2.08
NEDD4P46934 AL713866.2-201ENST00000603579 219 ntBASIC2.09□□□□□ -2.08
NEDD4P46934 AL670379.2-201ENST00000604983 252 ntBASIC2.09□□□□□ -2.08
NEDD4P46934 AC018889.1-201ENST00000605372 397 ntBASIC2.09□□□□□ -2.08
NEDD4P46934 MIR8076-201ENST00000611401 83 ntBASIC2.09□□□□□ -2.08
NEDD4P46934 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.09□□□□□ -2.08
NEDD4P46934 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.09□□□□□ -2.08
NEDD4P46934 AC099654.14-201ENST00000638599 341 ntBASIC2.09□□□□□ -2.08
NEDD4P46934 CBX3P1-201ENST00000325243 554 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 Y_RNA.160-201ENST00000363677 92 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 Y_RNA.279-201ENST00000364763 95 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
NEDD4P46934 RNU6-142P-201ENST00000384019 107 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 RNU6-767P-201ENST00000384132 107 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 RNU6-876P-201ENST00000391295 104 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 MTND3P8-201ENST00000412909 339 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 AL603825.1-201ENST00000438481 80 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 AC007677.1-201ENST00000445757 515 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 PCMTD1P1-201ENST00000455560 355 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 MTND1P11-201ENST00000456661 876 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 RPS29P27-201ENST00000463711 170 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.08□□□□□ -2.08
NEDD4P46934 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.08□□□□□ -2.08
NEDD4P46934 HMGB1P35-201ENST00000503360 598 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 MTCO2P30-201ENST00000503662 364 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 RNU5F-2P-201ENST00000516066 82 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 RNU6-566P-201ENST00000516790 107 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 RNA5SP364-201ENST00000516938 78 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 RNA5SP454-201ENST00000517231 127 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 RNU6-586P-201ENST00000517265 104 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 AC016256.1-201ENST00000547971 354 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 AC007375.1-201ENST00000554513 578 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 AC093249.1-201ENST00000567049 203 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 AP001094.1-201ENST00000579805 193 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.08□□□□□ -2.08
NEDD4P46934 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.08□□□□□ -2.08
NEDD4P46934 AL355297.2-201ENST00000604792 129 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 AC025754.2-201ENST00000606491 432 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 U4atac.1-201ENST00000618345 95 ntBASIC2.08□□□□□ -2.08
NEDD4P46934 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.08□□□□□ -2.08
NEDD4P46934 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
NEDD4P46934 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
NEDD4P46934 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NEDD4P46934 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
NEDD4P46934 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
NEDD4P46934 SNORA38-201ENST00000363946 132 ntBASIC2.07□□□□□ -2.08
NEDD4P46934 RNU4-56P-201ENST00000364700 142 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms