Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
TNFSF9P41273 AC104136.1-201ENST00000512969 394 ntBASIC1.38□□□□□ -2.19
TNFSF9P41273 RNU6-1038P-201ENST00000516516 104 ntBASIC1.38□□□□□ -2.19
TNFSF9P41273 SNORA31.17-201ENST00000516953 127 ntBASIC1.38□□□□□ -2.19
TNFSF9P41273 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.38□□□□□ -2.19
TNFSF9P41273 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.38□□□□□ -2.19
TNFSF9P41273 COPS8P3-201ENST00000526024 482 ntBASIC1.38□□□□□ -2.19
TNFSF9P41273 MIR3682-201ENST00000581338 84 ntBASIC1.38□□□□□ -2.19
TNFSF9P41273 AC018889.1-201ENST00000605372 397 ntBASIC1.38□□□□□ -2.19
TNFSF9P41273 AC002044.1-201ENST00000606707 158 ntBASIC1.38□□□□□ -2.19
TNFSF9P41273 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.38□□□□□ -2.19
TNFSF9P41273 MIR6078-201ENST00000611069 100 ntBASIC1.38□□□□□ -2.19
TNFSF9P41273 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
TNFSF9P41273 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.38□□□□□ -2.19
TNFSF9P41273 AC068792.1-201ENST00000621354 417 ntBASIC1.38□□□□□ -2.19
TNFSF9P41273 AC009161.2-201ENST00000624626 138 ntBASIC1.38□□□□□ -2.19
TNFSF9P41273 SNORD98-201ENST00000636377 67 ntBASIC1.38□□□□□ -2.19
TNFSF9P41273 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.38□□□□□ -2.19
TNFSF9P41273 MTND5P17-201ENST00000418405 1603 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 Y_RNA.41-201ENST00000362646 102 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 RNU6-1285P-201ENST00000363480 105 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 Y_RNA.355-201ENST00000365462 98 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 RNU6-338P-201ENST00000383888 105 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 SNORD116-2-201ENST00000384274 95 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 SNORD116-6-201ENST00000384711 96 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 SNORD70.1-201ENST00000391007 85 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 AC016907.1-201ENST00000419483 435 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 DLGAP5P1-201ENST00000430307 464 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.37□□□□□ -2.19
TNFSF9P41273 AL596276.1-201ENST00000434465 418 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.37□□□□□ -2.19
TNFSF9P41273 AC243964.1-201ENST00000441814 261 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.37□□□□□ -2.19
TNFSF9P41273 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.37□□□□□ -2.19
TNFSF9P41273 SCARNA18-201ENST00000459004 134 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.37□□□□□ -2.19
TNFSF9P41273 AC010409.1-201ENST00000487382 476 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.37□□□□□ -2.19
TNFSF9P41273 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.37□□□□□ -2.19
TNFSF9P41273 RPL39P5-202ENST00000512505 151 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 RNU2-69P-201ENST00000516061 100 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 MTCO2P4-201ENST00000517968 247 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.37□□□□□ -2.19
TNFSF9P41273 AP002963.1-201ENST00000530590 184 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.37□□□□□ -2.19
TNFSF9P41273 AL118558.2-201ENST00000556294 238 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 AC107304.1-201ENST00000604229 296 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.37□□□□□ -2.19
TNFSF9P41273 AP001596.2-201ENST00000608410 312 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
TNFSF9P41273 MIR6504-201ENST00000613520 61 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 MIR8074-201ENST00000615081 81 ntBASIC1.37□□□□□ -2.19
TNFSF9P41273 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.37□□□□□ -2.19
TNFSF9P41273 AP000560.1-201ENST00000624150 1937 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 LINC02555-201ENST00000563933 1951 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 RNU1-62P-201ENST00000362599 164 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 Y_RNA.77-201ENST00000362962 107 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 SNORD32B-201ENST00000364460 84 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 RNU4-48P-201ENST00000365559 182 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TNFSF9P41273 RNU6-26P-201ENST00000383985 107 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 SNORD116-9-201ENST00000384000 95 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 SNORD116-3-201ENST00000384287 95 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 RNU6-1119P-201ENST00000384349 108 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 SNORD116-7-201ENST00000384404 95 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 SNORD116-5-201ENST00000384462 95 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 RNU6-692P-201ENST00000384496 107 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 AL663109.1-201ENST00000411498 844 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.36□□□□□ -2.19
TNFSF9P41273 MTATP6P18-201ENST00000417994 673 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 AL589823.1-201ENST00000429577 183 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 C8orf59P1-201ENST00000429930 303 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.36□□□□□ -2.19
TNFSF9P41273 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.36□□□□□ -2.19
TNFSF9P41273 RNU7-182P-201ENST00000459009 62 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.36□□□□□ -2.19
TNFSF9P41273 RNA5SP102-201ENST00000516865 106 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 RNA5SP503-201ENST00000517047 117 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 SNORA25.17-201ENST00000517184 124 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.36□□□□□ -2.19
TNFSF9P41273 AL391840.1-201ENST00000571144 367 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 MIR3611-201ENST00000584484 83 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 AP001485.1-201ENST00000604799 199 ntBASIC1.36□□□□□ -2.19
TNFSF9P41273 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TNFSF9P41273 RNU6-552P-201ENST00000362869 119 ntBASIC1.35□□□□□ -2.19
TNFSF9P41273 Y_RNA.116-201ENST00000363292 103 ntBASIC1.35□□□□□ -2.19
TNFSF9P41273 RNU6-1097P-201ENST00000363586 107 ntBASIC1.35□□□□□ -2.19
TNFSF9P41273 RNU6-997P-201ENST00000384725 107 ntBASIC1.35□□□□□ -2.19
TNFSF9P41273 RNU2-66P-201ENST00000410650 161 ntBASIC1.35□□□□□ -2.19
TNFSF9P41273 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.35□□□□□ -2.19
TNFSF9P41273 AL606489.2-201ENST00000433886 234 ntBASIC1.35□□□□□ -2.19
TNFSF9P41273 AC079781.2-201ENST00000446424 169 ntBASIC1.35□□□□□ -2.19
TNFSF9P41273 RPL36AP21-201ENST00000490372 323 ntBASIC1.35□□□□□ -2.19
TNFSF9P41273 AC022447.4-201ENST00000504053 364 ntBASIC1.35□□□□□ -2.19
TNFSF9P41273 MTCO3P7-201ENST00000510008 774 ntBASIC1.35□□□□□ -2.19
TNFSF9P41273 AC005741.1-201ENST00000511094 432 ntBASIC1.35□□□□□ -2.19
TNFSF9P41273 AC091874.1-201ENST00000511402 339 ntBASIC1.35□□□□□ -2.19
TNFSF9P41273 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.35□□□□□ -2.19
TNFSF9P41273 SUB1P4-201ENST00000566062 339 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms