Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AL391834.2-201ENST00000609982 546 ntBASIC0.92□□□□□ -2.26
RPA3P35244 AC008147.4-201ENST00000617570 1204 ntBASIC0.92□□□□□ -2.26
RPA3P35244 AC099654.5-201ENST00000636479 350 ntBASIC0.92□□□□□ -2.26
RPA3P35244 AL450472.1-202ENST00000637286 180 ntBASIC0.92□□□□□ -2.26
RPA3P35244 MTND5P17-201ENST00000418405 1603 ntBASIC0.92□□□□□ -2.26
RPA3P35244 Y_RNA.4-201ENST00000362333 112 ntBASIC0.91□□□□□ -2.26
RPA3P35244 RNU1-76P-201ENST00000362903 159 ntBASIC0.91□□□□□ -2.26
RPA3P35244 Y_RNA.164-201ENST00000363709 102 ntBASIC0.91□□□□□ -2.26
RPA3P35244 RNU6-1080P-201ENST00000383982 107 ntBASIC0.91□□□□□ -2.26
RPA3P35244 Y_RNA.504-201ENST00000384481 104 ntBASIC0.91□□□□□ -2.26
RPA3P35244 RPS29P13-201ENST00000402041 169 ntBASIC0.91□□□□□ -2.26
RPA3P35244 AL356776.1-201ENST00000406574 447 ntBASIC0.91□□□□□ -2.26
RPA3P35244 RNU2-8P-201ENST00000410727 190 ntBASIC0.91□□□□□ -2.26
RPA3P35244 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.91□□□□□ -2.26
RPA3P35244 AC060773.1-201ENST00000421698 310 ntBASIC0.91□□□□□ -2.26
RPA3P35244 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.91□□□□□ -2.26
RPA3P35244 CST2P1-201ENST00000425770 87 ntBASIC0.91□□□□□ -2.26
RPA3P35244 RPL23AP95-201ENST00000426806 265 ntBASIC0.91□□□□□ -2.26
RPA3P35244 AL133396.1-201ENST00000432048 687 ntBASIC0.91□□□□□ -2.26
RPA3P35244 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.91□□□□□ -2.26
RPA3P35244 TAF9P1-201ENST00000445421 515 ntBASIC0.91□□□□□ -2.26
RPA3P35244 TAF9P2-201ENST00000454958 515 ntBASIC0.91□□□□□ -2.26
RPA3P35244 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.91□□□□□ -2.26
RPA3P35244 RNU6-311P-201ENST00000516224 102 ntBASIC0.91□□□□□ -2.26
RPA3P35244 RNA5SP102-201ENST00000516865 106 ntBASIC0.91□□□□□ -2.26
RPA3P35244 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.91□□□□□ -2.26
RPA3P35244 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.91□□□□□ -2.26
RPA3P35244 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.91□□□□□ -2.26
RPA3P35244 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.91□□□□□ -2.26
RPA3P35244 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.91□□□□□ -2.26
RPA3P35244 AC008751.2-201ENST00000597885 980 ntBASIC0.91□□□□□ -2.26
RPA3P35244 Z99289.3-201ENST00000605586 594 ntBASIC0.91□□□□□ -2.26
RPA3P35244 AP000240.1-201ENST00000609910 452 ntBASIC0.91□□□□□ -2.26
RPA3P35244 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.9□□□□□ -2.27
RPA3P35244 Y_RNA.132-201ENST00000363421 102 ntBASIC0.9□□□□□ -2.27
RPA3P35244 RNU6-1187P-201ENST00000364771 110 ntBASIC0.9□□□□□ -2.27
RPA3P35244 RNU6-418P-201ENST00000384035 107 ntBASIC0.9□□□□□ -2.27
RPA3P35244 AL117339.3-201ENST00000418733 162 ntBASIC0.9□□□□□ -2.27
RPA3P35244 USP9YP14-201ENST00000430663 563 ntBASIC0.9□□□□□ -2.27
RPA3P35244 AL031274.1-201ENST00000450334 232 ntBASIC0.9□□□□□ -2.27
RPA3P35244 RPS27P1-201ENST00000450552 247 ntBASIC0.9□□□□□ -2.27
RPA3P35244 MTCO2P6-201ENST00000463134 685 ntBASIC0.9□□□□□ -2.27
RPA3P35244 AC114982.1-201ENST00000469402 321 ntBASIC0.9□□□□□ -2.27
RPA3P35244 RPS23P5-201ENST00000495419 428 ntBASIC0.9□□□□□ -2.27
RPA3P35244 AC016632.1-201ENST00000503994 196 ntBASIC0.9□□□□□ -2.27
RPA3P35244 ARL2BPP4-201ENST00000506854 471 ntBASIC0.9□□□□□ -2.27
RPA3P35244 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.9□□□□□ -2.27
RPA3P35244 RNA5SP384-201ENST00000516615 116 ntBASIC0.9□□□□□ -2.27
RPA3P35244 Vault.3-201ENST00000516676 95 ntBASIC0.9□□□□□ -2.27
RPA3P35244 RN7SKP88-201ENST00000516847 250 ntBASIC0.9□□□□□ -2.27
RPA3P35244 RNU6-856P-201ENST00000516959 98 ntBASIC0.9□□□□□ -2.27
RPA3P35244 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.9□□□□□ -2.27
RPA3P35244 AC103996.1-201ENST00000555468 102 ntBASIC0.9□□□□□ -2.27
RPA3P35244 CYP4A27P-201ENST00000567218 190 ntBASIC0.9□□□□□ -2.27
RPA3P35244 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.9□□□□□ -2.27
RPA3P35244 VN1R107P-201ENST00000601784 209 ntBASIC0.9□□□□□ -2.27
RPA3P35244 AL356157.2-201ENST00000605122 111 ntBASIC0.9□□□□□ -2.27
RPA3P35244 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.9□□□□□ -2.27
RPA3P35244 7SK.8-201ENST00000612110 250 ntBASIC0.9□□□□□ -2.27
RPA3P35244 7SK.11-201ENST00000615477 250 ntBASIC0.9□□□□□ -2.27
RPA3P35244 MIR7844-201ENST00000616161 122 ntBASIC0.9□□□□□ -2.27
RPA3P35244 7SK.13-201ENST00000622040 250 ntBASIC0.9□□□□□ -2.27
RPA3P35244 AL078595.3-201ENST00000623815 1166 ntBASIC0.9□□□□□ -2.27
RPA3P35244 RNU6-545P-201ENST00000362681 104 ntBASIC0.89□□□□□ -2.27
RPA3P35244 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
RPA3P35244 MIR208B-201ENST00000401172 77 ntBASIC0.89□□□□□ -2.27
RPA3P35244 COX6CP10-201ENST00000416832 224 ntBASIC0.89□□□□□ -2.27
RPA3P35244 USP9YP28-201ENST00000435142 589 ntBASIC0.89□□□□□ -2.27
RPA3P35244 AC073614.1-201ENST00000438690 650 ntBASIC0.89□□□□□ -2.27
RPA3P35244 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.89□□□□□ -2.27
RPA3P35244 UBE2D3P4-201ENST00000441973 436 ntBASIC0.89□□□□□ -2.27
RPA3P35244 PGBD4P5-201ENST00000445958 426 ntBASIC0.89□□□□□ -2.27
RPA3P35244 RPS26P45-201ENST00000471748 340 ntBASIC0.89□□□□□ -2.27
RPA3P35244 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.89□□□□□ -2.27
RPA3P35244 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.89□□□□□ -2.27
RPA3P35244 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.89□□□□□ -2.27
RPA3P35244 AK3P2-201ENST00000507976 429 ntBASIC0.89□□□□□ -2.27
RPA3P35244 AC011406.1-201ENST00000512440 370 ntBASIC0.89□□□□□ -2.27
RPA3P35244 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
RPA3P35244 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.89□□□□□ -2.27
RPA3P35244 AL442163.3-201ENST00000554110 156 ntBASIC0.89□□□□□ -2.27
RPA3P35244 AC091805.2-201ENST00000603848 235 ntBASIC0.89□□□□□ -2.27
RPA3P35244 AC008945.2-201ENST00000606056 604 ntBASIC0.89□□□□□ -2.27
RPA3P35244 AC009994.1-201ENST00000606889 253 ntBASIC0.89□□□□□ -2.27
RPA3P35244 AC040896.1-201ENST00000613819 479 ntBASIC0.89□□□□□ -2.27
RPA3P35244 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.89□□□□□ -2.27
RPA3P35244 AC008250.2-201ENST00000615261 205 ntBASIC0.89□□□□□ -2.27
RPA3P35244 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.89□□□□□ -2.27
RPA3P35244 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
RPA3P35244 RNU6-827P-201ENST00000365553 106 ntBASIC0.88□□□□□ -2.27
RPA3P35244 SNORA70.7-201ENST00000384159 133 ntBASIC0.88□□□□□ -2.27
RPA3P35244 MIR222-201ENST00000384992 110 ntBASIC0.88□□□□□ -2.27
RPA3P35244 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
RPA3P35244 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.88□□□□□ -2.27
RPA3P35244 AC069257.2-201ENST00000441819 155 ntBASIC0.88□□□□□ -2.27
RPA3P35244 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.88□□□□□ -2.27
RPA3P35244 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.88□□□□□ -2.27
RPA3P35244 RNU6-113P-201ENST00000516653 101 ntBASIC0.88□□□□□ -2.27
RPA3P35244 RNU6-410P-201ENST00000517006 107 ntBASIC0.88□□□□□ -2.27
RPA3P35244 RNA5SP503-201ENST00000517047 117 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms