Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CD40LGP29965 RNU6-428P-201ENST00000362942 107 ntBASIC0.69□□□□□ -2.3
CD40LGP29965 SNORA25.9-201ENST00000365087 128 ntBASIC0.69□□□□□ -2.3
CD40LGP29965 Y_RNA.324-201ENST00000365165 102 ntBASIC0.69□□□□□ -2.3
CD40LGP29965 RNU6-877P-201ENST00000383868 107 ntBASIC0.69□□□□□ -2.3
CD40LGP29965 RNU6-45P-201ENST00000384471 107 ntBASIC0.69□□□□□ -2.3
CD40LGP29965 RNU11-5P-201ENST00000391216 129 ntBASIC0.69□□□□□ -2.3
CD40LGP29965 AC063976.4-201ENST00000421971 163 ntBASIC0.69□□□□□ -2.3
CD40LGP29965 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.69□□□□□ -2.3
CD40LGP29965 GAPDHP17-201ENST00000449858 1001 ntBASIC0.69□□□□□ -2.3
CD40LGP29965 RNU7-34P-201ENST00000459394 64 ntBASIC0.69□□□□□ -2.3
CD40LGP29965 snoU109.3-201ENST00000459477 145 ntBASIC0.69□□□□□ -2.3
CD40LGP29965 RN7SKP49-201ENST00000516675 260 ntBASIC0.69□□□□□ -2.3
CD40LGP29965 RNA5SP102-201ENST00000516865 106 ntBASIC0.69□□□□□ -2.3
CD40LGP29965 HSPE1P4-201ENST00000550617 308 ntBASIC0.69□□□□□ -2.3
CD40LGP29965 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.69□□□□□ -2.3
CD40LGP29965 MIR4742-201ENST00000581069 85 ntBASIC0.69□□□□□ -2.3
CD40LGP29965 MIR338-201ENST00000636369 67 ntBASIC0.69□□□□□ -2.3
CD40LGP29965 AC092268.1-201ENST00000342691 405 ntBASIC0.68□□□□□ -2.3
CD40LGP29965 Y_RNA.164-201ENST00000363709 102 ntBASIC0.68□□□□□ -2.3
CD40LGP29965 SNORD32A-201ENST00000364805 84 ntBASIC0.68□□□□□ -2.3
CD40LGP29965 RNU6-116P-201ENST00000384042 109 ntBASIC0.68□□□□□ -2.3
CD40LGP29965 Y_RNA.576-201ENST00000384781 102 ntBASIC0.68□□□□□ -2.3
CD40LGP29965 RNU6-910P-201ENST00000390844 107 ntBASIC0.68□□□□□ -2.3
CD40LGP29965 MRPL42P2-201ENST00000403169 426 ntBASIC0.68□□□□□ -2.3
CD40LGP29965 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.68□□□□□ -2.3
CD40LGP29965 MTND5P15-201ENST00000434246 349 ntBASIC0.68□□□□□ -2.3
CD40LGP29965 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.68□□□□□ -2.3
CD40LGP29965 SNORD124-201ENST00000459577 104 ntBASIC0.68□□□□□ -2.3
CD40LGP29965 RPS23P5-201ENST00000495419 428 ntBASIC0.68□□□□□ -2.3
CD40LGP29965 AC091951.3-201ENST00000504093 246 ntBASIC0.68□□□□□ -2.3
CD40LGP29965 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CD40LGP29965 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.68□□□□□ -2.3
CD40LGP29965 AC112206.4-201ENST00000515142 405 ntBASIC0.68□□□□□ -2.3
CD40LGP29965 RNA5SP168-201ENST00000516642 112 ntBASIC0.68□□□□□ -2.3
CD40LGP29965 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.68□□□□□ -2.3
CD40LGP29965 AC091489.2-201ENST00000566263 604 ntBASIC0.68□□□□□ -2.3
CD40LGP29965 AC109446.2-201ENST00000567872 497 ntBASIC0.68□□□□□ -2.3
CD40LGP29965 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.68□□□□□ -2.3
CD40LGP29965 AC008751.2-201ENST00000597885 980 ntBASIC0.68□□□□□ -2.3
CD40LGP29965 VN1R107P-201ENST00000601784 209 ntBASIC0.68□□□□□ -2.3
CD40LGP29965 AL121992.2-201ENST00000606262 256 ntBASIC0.68□□□□□ -2.3
CD40LGP29965 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.68□□□□□ -2.3
CD40LGP29965 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
CD40LGP29965 RNU6-179P-201ENST00000363350 107 ntBASIC0.67□□□□□ -2.3
CD40LGP29965 SNORD114-27-201ENST00000363766 70 ntBASIC0.67□□□□□ -2.3
CD40LGP29965 RNU6-418P-201ENST00000384035 107 ntBASIC0.67□□□□□ -2.3
CD40LGP29965 RNU6-1200P-201ENST00000384162 107 ntBASIC0.67□□□□□ -2.3
CD40LGP29965 MIR200A-201ENST00000384875 90 ntBASIC0.67□□□□□ -2.3
CD40LGP29965 Y_RNA.608-201ENST00000410647 95 ntBASIC0.67□□□□□ -2.3
CD40LGP29965 RNU6-1054P-201ENST00000411293 104 ntBASIC0.67□□□□□ -2.3
CD40LGP29965 RNU6-387P-201ENST00000411331 105 ntBASIC0.67□□□□□ -2.3
CD40LGP29965 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.67□□□□□ -2.3
CD40LGP29965 MTATP6P16-201ENST00000434543 526 ntBASIC0.67□□□□□ -2.3
CD40LGP29965 AC002429.1-201ENST00000437672 148 ntBASIC0.67□□□□□ -2.3
CD40LGP29965 AC091435.1-201ENST00000505442 584 ntBASIC0.67□□□□□ -2.3
CD40LGP29965 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.67□□□□□ -2.3
CD40LGP29965 SNORA31.2-201ENST00000516019 134 ntBASIC0.67□□□□□ -2.3
CD40LGP29965 RNU2-34P-201ENST00000516534 121 ntBASIC0.67□□□□□ -2.3
CD40LGP29965 AC109479.2-201ENST00000517842 174 ntBASIC0.67□□□□□ -2.3
CD40LGP29965 SUMO2P16-201ENST00000519475 264 ntBASIC0.67□□□□□ -2.3
CD40LGP29965 CBX3P8-201ENST00000532412 525 ntBASIC0.67□□□□□ -2.3
CD40LGP29965 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.67□□□□□ -2.3
CD40LGP29965 AC018645.2-201ENST00000609151 472 ntBASIC0.67□□□□□ -2.3
CD40LGP29965 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.67□□□□□ -2.3
CD40LGP29965 AL450472.1-202ENST00000637286 180 ntBASIC0.67□□□□□ -2.3
CD40LGP29965 Y_RNA.4-201ENST00000362333 112 ntBASIC0.66□□□□□ -2.3
CD40LGP29965 RNU6-1303P-201ENST00000364841 107 ntBASIC0.66□□□□□ -2.3
CD40LGP29965 AL133396.1-201ENST00000432048 687 ntBASIC0.66□□□□□ -2.3
CD40LGP29965 AC084290.1-201ENST00000434995 374 ntBASIC0.66□□□□□ -2.3
CD40LGP29965 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.66□□□□□ -2.3
CD40LGP29965 AL133217.1-201ENST00000450980 425 ntBASIC0.66□□□□□ -2.3
CD40LGP29965 C1DP4-201ENST00000455429 424 ntBASIC0.66□□□□□ -2.3
CD40LGP29965 HMGN1P12-201ENST00000499125 195 ntBASIC0.66□□□□□ -2.3
CD40LGP29965 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.66□□□□□ -2.3
CD40LGP29965 RNU6-1220P-201ENST00000517126 108 ntBASIC0.66□□□□□ -2.3
CD40LGP29965 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CD40LGP29965 AC090142.3-201ENST00000519012 385 ntBASIC0.66□□□□□ -2.3
CD40LGP29965 AC023050.3-201ENST00000541142 333 ntBASIC0.66□□□□□ -2.3
CD40LGP29965 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.66□□□□□ -2.3
CD40LGP29965 AL359999.1-201ENST00000604513 294 ntBASIC0.66□□□□□ -2.3
CD40LGP29965 AL158050.2-201ENST00000605336 568 ntBASIC0.66□□□□□ -2.3
CD40LGP29965 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.66□□□□□ -2.3
CD40LGP29965 AL445984.1-201ENST00000637834 659 ntBASIC0.66□□□□□ -2.3
CD40LGP29965 BX322639.1-202ENST00000423987 2213 ntBASIC0.66□□□□□ -2.3
CD40LGP29965 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.65□□□□□ -2.3
CD40LGP29965 RNU6-545P-201ENST00000362681 104 ntBASIC0.65□□□□□ -2.31
CD40LGP29965 RNU6-552P-201ENST00000362869 119 ntBASIC0.65□□□□□ -2.31
CD40LGP29965 Y_RNA.191-201ENST00000363972 113 ntBASIC0.65□□□□□ -2.31
CD40LGP29965 SNORD115-7-201ENST00000365306 82 ntBASIC0.65□□□□□ -2.31
CD40LGP29965 RNU6-950P-201ENST00000384651 107 ntBASIC0.65□□□□□ -2.31
CD40LGP29965 AC002486.1-201ENST00000435098 391 ntBASIC0.65□□□□□ -2.31
CD40LGP29965 MTATP6P14-201ENST00000455189 673 ntBASIC0.65□□□□□ -2.31
CD40LGP29965 AC116562.3-201ENST00000506136 177 ntBASIC0.65□□□□□ -2.31
CD40LGP29965 ARL2BPP4-201ENST00000506854 471 ntBASIC0.65□□□□□ -2.31
CD40LGP29965 AC104136.1-201ENST00000512969 394 ntBASIC0.65□□□□□ -2.31
CD40LGP29965 RNU6-567P-201ENST00000516746 107 ntBASIC0.65□□□□□ -2.31
CD40LGP29965 AC022616.3-201ENST00000523940 148 ntBASIC0.65□□□□□ -2.31
CD40LGP29965 AC068587.5-201ENST00000528506 175 ntBASIC0.65□□□□□ -2.31
CD40LGP29965 AC008015.1-201ENST00000555505 465 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms