Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.16□□□□□ -2.06
BDNFP23560 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
BDNFP23560 AL356292.1-201ENST00000283110 373 ntBASIC2.16□□□□□ -2.06
BDNFP23560 SNORD116-1-201ENST00000384335 95 ntBASIC2.16□□□□□ -2.06
BDNFP23560 MIR1289-2-201ENST00000408360 111 ntBASIC2.16□□□□□ -2.06
BDNFP23560 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.16□□□□□ -2.06
BDNFP23560 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
BDNFP23560 AC027124.2-201ENST00000428249 105 ntBASIC2.16□□□□□ -2.06
BDNFP23560 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.16□□□□□ -2.06
BDNFP23560 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.16□□□□□ -2.06
BDNFP23560 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.16□□□□□ -2.06
BDNFP23560 HMGN1P13-201ENST00000505795 138 ntBASIC2.16□□□□□ -2.06
BDNFP23560 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.16□□□□□ -2.06
BDNFP23560 FAM206BP-201ENST00000510179 541 ntBASIC2.16□□□□□ -2.06
BDNFP23560 RNU2-34P-201ENST00000516534 121 ntBASIC2.16□□□□□ -2.06
BDNFP23560 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.16□□□□□ -2.06
BDNFP23560 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.16□□□□□ -2.06
BDNFP23560 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.16□□□□□ -2.06
BDNFP23560 AP005136.1-201ENST00000579765 429 ntBASIC2.16□□□□□ -2.06
BDNFP23560 AC100830.2-201ENST00000581636 240 ntBASIC2.16□□□□□ -2.06
BDNFP23560 AL158827.2-201ENST00000602494 330 ntBASIC2.16□□□□□ -2.06
BDNFP23560 AC092807.2-201ENST00000609367 243 ntBASIC2.16□□□□□ -2.06
BDNFP23560 AC022079.1-201ENST00000621546 602 ntBASIC2.16□□□□□ -2.06
BDNFP23560 AC124864.2-201ENST00000624736 186 ntBASIC2.16□□□□□ -2.06
BDNFP23560 AL691447.3-201ENST00000635020 330 ntBASIC2.16□□□□□ -2.06
BDNFP23560 MTND5P9-201ENST00000503854 1755 ntBASIC2.15□□□□□ -2.06
BDNFP23560 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
BDNFP23560 AC121333.1-201ENST00000567488 2709 ntBASIC2.15□□□□□ -2.06
BDNFP23560 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.07
BDNFP23560 Y_RNA.378-201ENST00000365652 113 ntBASIC2.15□□□□□ -2.07
BDNFP23560 SNORA36A-201ENST00000384221 132 ntBASIC2.15□□□□□ -2.07
BDNFP23560 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
BDNFP23560 RNA5SP494-201ENST00000410653 129 ntBASIC2.15□□□□□ -2.07
BDNFP23560 RPS26P42-201ENST00000413485 326 ntBASIC2.15□□□□□ -2.07
BDNFP23560 MRPS10P2-201ENST00000431226 381 ntBASIC2.15□□□□□ -2.07
BDNFP23560 FTH1P12-201ENST00000432137 551 ntBASIC2.15□□□□□ -2.07
BDNFP23560 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.15□□□□□ -2.07
BDNFP23560 USP9YP28-201ENST00000435142 589 ntBASIC2.15□□□□□ -2.07
BDNFP23560 SEPT14P3-201ENST00000439401 183 ntBASIC2.15□□□□□ -2.07
BDNFP23560 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.15□□□□□ -2.07
BDNFP23560 AL732372.2-207ENST00000445840 183 ntBASIC2.15□□□□□ -2.07
BDNFP23560 AL357134.1-201ENST00000445848 426 ntBASIC2.15□□□□□ -2.07
BDNFP23560 RPL23AP7-203ENST00000449021 469 ntBASIC2.15□□□□□ -2.07
BDNFP23560 SEPT14P2-201ENST00000453405 183 ntBASIC2.15□□□□□ -2.07
BDNFP23560 AC114982.1-201ENST00000469402 321 ntBASIC2.15□□□□□ -2.07
BDNFP23560 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.15□□□□□ -2.07
BDNFP23560 MTCO1P29-201ENST00000496868 288 ntBASIC2.15□□□□□ -2.07
BDNFP23560 AC097473.1-201ENST00000508142 408 ntBASIC2.15□□□□□ -2.07
BDNFP23560 AC025465.3-201ENST00000510570 311 ntBASIC2.15□□□□□ -2.07
BDNFP23560 SEPT14P4-201ENST00000513445 186 ntBASIC2.15□□□□□ -2.07
BDNFP23560 FO082796.1-201ENST00000523795 183 ntBASIC2.15□□□□□ -2.07
BDNFP23560 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.15□□□□□ -2.07
BDNFP23560 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.15□□□□□ -2.07
BDNFP23560 AL157687.1-201ENST00000554853 619 ntBASIC2.15□□□□□ -2.07
BDNFP23560 SUB1P4-201ENST00000566062 339 ntBASIC2.15□□□□□ -2.07
BDNFP23560 MTND1P15-201ENST00000579262 949 ntBASIC2.15□□□□□ -2.07
BDNFP23560 MIR5692C1-201ENST00000585309 91 ntBASIC2.15□□□□□ -2.07
BDNFP23560 FER-210ENST00000628534 558 ntTSL 5 BASIC2.15□□□□□ -2.07
BDNFP23560 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
BDNFP23560 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
BDNFP23560 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.14□□□□□ -2.07
BDNFP23560 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.14□□□□□ -2.07
BDNFP23560 AC074290.1-201ENST00000448883 135 ntBASIC2.14□□□□□ -2.07
BDNFP23560 MTND3P16-201ENST00000452205 344 ntBASIC2.14□□□□□ -2.07
BDNFP23560 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.14□□□□□ -2.07
BDNFP23560 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
BDNFP23560 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.14□□□□□ -2.07
BDNFP23560 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
BDNFP23560 FGF7P1-201ENST00000582820 288 ntBASIC2.14□□□□□ -2.07
BDNFP23560 AC104984.5-201ENST00000586878 94 ntBASIC2.14□□□□□ -2.07
BDNFP23560 AC069114.2-201ENST00000604699 304 ntBASIC2.14□□□□□ -2.07
BDNFP23560 AC004492.1-201ENST00000607036 742 ntBASIC2.14□□□□□ -2.07
BDNFP23560 MIR8074-201ENST00000615081 81 ntBASIC2.14□□□□□ -2.07
BDNFP23560 AL359880.1-201ENST00000621879 266 ntBASIC2.14□□□□□ -2.07
BDNFP23560 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.14□□□□□ -2.07
BDNFP23560 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.13□□□□□ -2.07
BDNFP23560 RNU6-1286P-201ENST00000383871 107 ntBASIC2.13□□□□□ -2.07
BDNFP23560 Y_RNA.409-201ENST00000383990 98 ntBASIC2.13□□□□□ -2.07
BDNFP23560 RNU6-968P-201ENST00000384076 107 ntBASIC2.13□□□□□ -2.07
BDNFP23560 SNORD116-2-201ENST00000384274 95 ntBASIC2.13□□□□□ -2.07
BDNFP23560 SNORD116-6-201ENST00000384711 96 ntBASIC2.13□□□□□ -2.07
BDNFP23560 RNU2-66P-201ENST00000410650 161 ntBASIC2.13□□□□□ -2.07
BDNFP23560 MTCO3P46-201ENST00000425787 232 ntBASIC2.13□□□□□ -2.07
BDNFP23560 MTND3P9-201ENST00000429526 346 ntBASIC2.13□□□□□ -2.07
BDNFP23560 ATP5J2P3-201ENST00000451550 258 ntBASIC2.13□□□□□ -2.07
BDNFP23560 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.13□□□□□ -2.07
BDNFP23560 AC087477.1-201ENST00000465747 340 ntBASIC2.13□□□□□ -2.07
BDNFP23560 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.13□□□□□ -2.07
BDNFP23560 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.13□□□□□ -2.07
BDNFP23560 RNU6-1038P-201ENST00000516516 104 ntBASIC2.13□□□□□ -2.07
BDNFP23560 Y_RNA.693-201ENST00000516641 110 ntBASIC2.13□□□□□ -2.07
BDNFP23560 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.13□□□□□ -2.07
BDNFP23560 AC104576.1-201ENST00000524225 88 ntBASIC2.13□□□□□ -2.07
BDNFP23560 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.13□□□□□ -2.07
BDNFP23560 MIR4753-201ENST00000585119 83 ntBASIC2.13□□□□□ -2.07
BDNFP23560 AC064836.2-201ENST00000609491 462 ntBASIC2.13□□□□□ -2.07
BDNFP23560 AC009318.2-201ENST00000610917 651 ntBASIC2.13□□□□□ -2.07
BDNFP23560 AL121757.2-201ENST00000611223 313 ntBASIC2.13□□□□□ -2.07
BDNFP23560 Z99129.1-201ENST00000612510 255 ntBASIC2.13□□□□□ -2.07
BDNFP23560 AC083806.3-201ENST00000614016 455 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms