Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.1□□□□□ -2.07
ERCC2P18074 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.1□□□□□ -2.07
ERCC2P18074 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.1□□□□□ -2.07
ERCC2P18074 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.1□□□□□ -2.07
ERCC2P18074 Y_RNA.783-201ENST00000613546 102 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 AC005520.5-201ENST00000613926 164 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.1□□□□□ -2.07
ERCC2P18074 AL136221.1-201ENST00000621449 509 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
ERCC2P18074 AP006437.1-201ENST00000641440 3685 ntBASIC2.1□□□□□ -2.07
ERCC2P18074 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
ERCC2P18074 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
ERCC2P18074 SNORA29-201ENST00000384183 140 ntBASIC2.09□□□□□ -2.07
ERCC2P18074 RNU6-933P-201ENST00000384424 107 ntBASIC2.09□□□□□ -2.07
ERCC2P18074 RNU11-3P-201ENST00000391111 133 ntBASIC2.09□□□□□ -2.07
ERCC2P18074 U3.40-201ENST00000408706 208 ntBASIC2.09□□□□□ -2.07
ERCC2P18074 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
ERCC2P18074 AL445646.1-201ENST00000431784 216 ntBASIC2.09□□□□□ -2.07
ERCC2P18074 HMGN2P3-201ENST00000433603 273 ntBASIC2.09□□□□□ -2.07
ERCC2P18074 MTND1P4-201ENST00000435196 415 ntBASIC2.09□□□□□ -2.07
ERCC2P18074 HMGN2P5-201ENST00000436882 273 ntBASIC2.09□□□□□ -2.07
ERCC2P18074 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.09□□□□□ -2.07
ERCC2P18074 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.09□□□□□ -2.07
ERCC2P18074 TRBVA-201ENST00000498804 316 ntBASIC2.09□□□□□ -2.07
ERCC2P18074 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.09□□□□□ -2.07
ERCC2P18074 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.09□□□□□ -2.07
ERCC2P18074 AP005660.1-201ENST00000522972 293 ntBASIC2.09□□□□□ -2.07
ERCC2P18074 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.09□□□□□ -2.07
ERCC2P18074 MRPS36P4-201ENST00000534436 298 ntBASIC2.09□□□□□ -2.07
ERCC2P18074 AC016256.1-201ENST00000547971 354 ntBASIC2.09□□□□□ -2.07
ERCC2P18074 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.09□□□□□ -2.07
ERCC2P18074 AC146944.4-201ENST00000602697 718 ntBASIC2.09□□□□□ -2.07
ERCC2P18074 AC009994.1-201ENST00000606889 253 ntBASIC2.09□□□□□ -2.07
ERCC2P18074 MIR8076-201ENST00000611401 83 ntBASIC2.09□□□□□ -2.07
ERCC2P18074 AL162373.1-201ENST00000620433 407 ntBASIC2.09□□□□□ -2.07
ERCC2P18074 AC090617.10-201ENST00000624308 134 ntBASIC2.09□□□□□ -2.07
ERCC2P18074 AC009487.4-201ENST00000624969 3585 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 Y_RNA.100-201ENST00000363141 102 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 SNORA70B-201ENST00000384210 135 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 MIR597-201ENST00000384968 97 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 RNU6-1093P-201ENST00000391194 107 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 RNU2-2P-201ENST00000410396 191 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 RN7SKP192-201ENST00000411291 327 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 ZNF885P-201ENST00000420174 1098 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.08□□□□□ -2.08
ERCC2P18074 AL590632.1-201ENST00000424289 371 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 AL645568.3-201ENST00000433683 316 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 RNU6-717P-201ENST00000459076 104 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 AC090255.1-201ENST00000495779 349 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 AC082651.2-201ENST00000496833 166 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 MTCYBP18-201ENST00000501056 747 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 ATP5EP1-201ENST00000510257 156 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 AC005741.1-201ENST00000511094 432 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 RNU6-256P-201ENST00000516747 97 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 RNU1-40P-201ENST00000516816 164 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 RNU1-97P-201ENST00000516872 164 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.08□□□□□ -2.08
ERCC2P18074 MIR4287-201ENST00000579398 78 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 MIR3672-201ENST00000584290 82 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 MIR3976-201ENST00000606807 139 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ERCC2P18074 U2.15-201ENST00000611544 191 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 U2.16-201ENST00000613119 191 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 U2.12-201ENST00000613778 191 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 U2.20-201ENST00000613956 192 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 AL138726.1-201ENST00000614873 333 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 U2.9-201ENST00000615427 191 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 U2.11-201ENST00000616345 191 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 U2.2-201ENST00000616535 191 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 U2.3-201ENST00000617785 191 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 U2.19-201ENST00000618602 191 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 RNU2-1-201ENST00000618664 191 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 U2.6-201ENST00000619225 191 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 U2.5-201ENST00000619465 191 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 U2.10-201ENST00000620268 191 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 MIR3662-201ENST00000637030 95 ntBASIC2.08□□□□□ -2.08
ERCC2P18074 RNU1-58P-201ENST00000362413 163 ntBASIC2.07□□□□□ -2.08
ERCC2P18074 U8.2-201ENST00000363156 134 ntBASIC2.07□□□□□ -2.08
ERCC2P18074 RNU6-1286P-201ENST00000383871 107 ntBASIC2.07□□□□□ -2.08
ERCC2P18074 Y_RNA.414-201ENST00000384011 101 ntBASIC2.07□□□□□ -2.08
ERCC2P18074 RNU6-95P-201ENST00000384697 107 ntBASIC2.07□□□□□ -2.08
ERCC2P18074 RNA5SP465-201ENST00000391195 109 ntBASIC2.07□□□□□ -2.08
ERCC2P18074 FCF1P9-201ENST00000412546 282 ntBASIC2.07□□□□□ -2.08
ERCC2P18074 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.07□□□□□ -2.08
ERCC2P18074 AL356379.1-201ENST00000414105 126 ntBASIC2.07□□□□□ -2.08
ERCC2P18074 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.07□□□□□ -2.08
ERCC2P18074 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
ERCC2P18074 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.07□□□□□ -2.08
ERCC2P18074 RNU6-1098P-201ENST00000516772 96 ntBASIC2.07□□□□□ -2.08
ERCC2P18074 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.07□□□□□ -2.08
ERCC2P18074 AC090517.1-201ENST00000569307 266 ntBASIC2.07□□□□□ -2.08
ERCC2P18074 MIR5089-201ENST00000580047 84 ntBASIC2.07□□□□□ -2.08
ERCC2P18074 MIR4648-201ENST00000580107 72 ntBASIC2.07□□□□□ -2.08
ERCC2P18074 FGF7P1-201ENST00000582820 288 ntBASIC2.07□□□□□ -2.08
ERCC2P18074 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.07□□□□□ -2.08
ERCC2P18074 AC002984.1-201ENST00000591692 448 ntBASIC2.07□□□□□ -2.08
ERCC2P18074 AC080078.2-201ENST00000603766 501 ntBASIC2.07□□□□□ -2.08
ERCC2P18074 AL133215.3-201ENST00000609801 448 ntBASIC2.07□□□□□ -2.08
ERCC2P18074 AC100810.6-201ENST00000638068 285 ntBASIC2.07□□□□□ -2.08
ERCC2P18074 RNU5B-2P-201ENST00000363036 113 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms