Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 SNORA33.2-201ENST00000365413 134 ntBASIC2.4□□□□□ -2.03
CDH1P12830 RNU6-968P-201ENST00000384076 107 ntBASIC2.4□□□□□ -2.03
CDH1P12830 Y_RNA.577-201ENST00000384794 101 ntBASIC2.4□□□□□ -2.03
CDH1P12830 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH1P12830 CYCSP48-201ENST00000417124 323 ntBASIC2.4□□□□□ -2.03
CDH1P12830 MCFD2P1-201ENST00000417812 300 ntBASIC2.4□□□□□ -2.03
CDH1P12830 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH1P12830 AL358453.1-201ENST00000422522 250 ntBASIC2.4□□□□□ -2.03
CDH1P12830 AL358075.3-201ENST00000426289 226 ntBASIC2.4□□□□□ -2.03
CDH1P12830 AC078809.1-201ENST00000427601 140 ntBASIC2.4□□□□□ -2.03
CDH1P12830 Z82188.1-201ENST00000436709 154 ntBASIC2.4□□□□□ -2.03
CDH1P12830 AC244670.1-201ENST00000436879 112 ntBASIC2.4□□□□□ -2.03
CDH1P12830 RPL30P10-201ENST00000488148 337 ntBASIC2.4□□□□□ -2.03
CDH1P12830 AC105758.1-201ENST00000506038 399 ntBASIC2.4□□□□□ -2.03
CDH1P12830 Y_RNA.661-201ENST00000516003 99 ntBASIC2.4□□□□□ -2.03
CDH1P12830 RNA5SP148-201ENST00000516527 94 ntBASIC2.4□□□□□ -2.03
CDH1P12830 RNA5SP82-201ENST00000516707 92 ntBASIC2.4□□□□□ -2.03
CDH1P12830 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.4□□□□□ -2.03
CDH1P12830 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.4□□□□□ -2.03
CDH1P12830 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.4□□□□□ -2.03
CDH1P12830 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.4□□□□□ -2.03
CDH1P12830 MIR5571-201ENST00000577998 113 ntBASIC2.4□□□□□ -2.03
CDH1P12830 AC008739.2-201ENST00000597006 317 ntBASIC2.4□□□□□ -2.03
CDH1P12830 AC010620.2-201ENST00000600135 313 ntBASIC2.4□□□□□ -2.03
CDH1P12830 AC096772.1-201ENST00000609146 564 ntBASIC2.4□□□□□ -2.03
CDH1P12830 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.4□□□□□ -2.03
CDH1P12830 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CDH1P12830 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CDH1P12830 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
CDH1P12830 AC135776.4-201ENST00000624300 1904 ntBASIC2.39□□□□□ -2.03
CDH1P12830 RNA5SP68-201ENST00000363885 119 ntBASIC2.39□□□□□ -2.03
CDH1P12830 Y_RNA.428-201ENST00000384078 102 ntBASIC2.39□□□□□ -2.03
CDH1P12830 SNORA29-201ENST00000384183 140 ntBASIC2.39□□□□□ -2.03
CDH1P12830 SNORA36A-201ENST00000384221 132 ntBASIC2.39□□□□□ -2.03
CDH1P12830 Y_RNA.504-201ENST00000384481 104 ntBASIC2.39□□□□□ -2.03
CDH1P12830 SNORA26.3-201ENST00000391119 136 ntBASIC2.39□□□□□ -2.03
CDH1P12830 RNU6-1156P-201ENST00000410365 100 ntBASIC2.39□□□□□ -2.03
CDH1P12830 RNA5SP494-201ENST00000410653 129 ntBASIC2.39□□□□□ -2.03
CDH1P12830 MTCO3P29-201ENST00000432119 779 ntBASIC2.39□□□□□ -2.03
CDH1P12830 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH1P12830 AC099799.1-201ENST00000439809 192 ntBASIC2.39□□□□□ -2.03
CDH1P12830 RPS3P1-201ENST00000456781 192 ntBASIC2.39□□□□□ -2.03
CDH1P12830 RN7SKP210-201ENST00000459176 261 ntBASIC2.39□□□□□ -2.03
CDH1P12830 RPL31P41-201ENST00000477967 372 ntBASIC2.39□□□□□ -2.03
CDH1P12830 RPL23AP75-201ENST00000491601 451 ntBASIC2.39□□□□□ -2.03
CDH1P12830 AF186996.7-201ENST00000492781 209 ntBASIC2.39□□□□□ -2.03
CDH1P12830 AC016632.1-201ENST00000503994 196 ntBASIC2.39□□□□□ -2.03
CDH1P12830 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH1P12830 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH1P12830 SNORD116.3-201ENST00000517176 78 ntBASIC2.39□□□□□ -2.03
CDH1P12830 RNU6-988P-201ENST00000519081 107 ntBASIC2.39□□□□□ -2.03
CDH1P12830 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH1P12830 AL590705.4-201ENST00000532209 134 ntBASIC2.39□□□□□ -2.03
CDH1P12830 AC016256.1-201ENST00000547971 354 ntBASIC2.39□□□□□ -2.03
CDH1P12830 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH1P12830 AC010928.2-201ENST00000588017 287 ntBASIC2.39□□□□□ -2.03
CDH1P12830 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.39□□□□□ -2.03
CDH1P12830 AC040896.1-201ENST00000613819 479 ntBASIC2.39□□□□□ -2.03
CDH1P12830 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.39□□□□□ -2.03
CDH1P12830 AC007792.1-201ENST00000623023 402 ntBASIC2.39□□□□□ -2.03
CDH1P12830 SCARNA4-201ENST00000629045 128 ntBASIC2.39□□□□□ -2.03
CDH1P12830 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.39□□□□□ -2.03
CDH1P12830 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.38□□□□□ -2.03
CDH1P12830 AP000560.1-201ENST00000624150 1937 ntBASIC2.38□□□□□ -2.03
CDH1P12830 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CDH1P12830 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.38□□□□□ -2.03
CDH1P12830 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.38□□□□□ -2.03
CDH1P12830 RNU6-874P-201ENST00000362390 105 ntBASIC2.38□□□□□ -2.03
CDH1P12830 RNU5B-2P-201ENST00000363036 113 ntBASIC2.38□□□□□ -2.03
CDH1P12830 SNORD114-19-201ENST00000363072 75 ntBASIC2.38□□□□□ -2.03
CDH1P12830 RNA5SP456-201ENST00000364002 114 ntBASIC2.38□□□□□ -2.03
CDH1P12830 RNU1-115P-201ENST00000365329 160 ntBASIC2.38□□□□□ -2.03
CDH1P12830 RNU6-1032P-201ENST00000384100 107 ntBASIC2.38□□□□□ -2.03
CDH1P12830 MIR518C-201ENST00000384822 101 ntBASIC2.38□□□□□ -2.03
CDH1P12830 MIR627-201ENST00000384979 97 ntBASIC2.38□□□□□ -2.03
CDH1P12830 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CDH1P12830 SNORA12.2-201ENST00000391040 156 ntBASIC2.38□□□□□ -2.03
CDH1P12830 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CDH1P12830 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.38□□□□□ -2.03
CDH1P12830 AC138623.1-201ENST00000418060 216 ntBASIC2.38□□□□□ -2.03
CDH1P12830 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH1P12830 MTCYBP10-201ENST00000424905 650 ntBASIC2.38□□□□□ -2.03
CDH1P12830 GPM6BP3-201ENST00000442797 145 ntBASIC2.38□□□□□ -2.03
CDH1P12830 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.38□□□□□ -2.03
CDH1P12830 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH1P12830 snoU13.14-201ENST00000459372 104 ntBASIC2.38□□□□□ -2.03
CDH1P12830 AC112771.1-201ENST00000463581 102 ntBASIC2.38□□□□□ -2.03
CDH1P12830 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.38□□□□□ -2.03
CDH1P12830 AC107222.1-201ENST00000510899 637 ntBASIC2.38□□□□□ -2.03
CDH1P12830 AC109329.1-201ENST00000518744 317 ntBASIC2.38□□□□□ -2.03
CDH1P12830 AC079598.5-201ENST00000547460 117 ntBASIC2.38□□□□□ -2.03
CDH1P12830 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH1P12830 AC105137.2-201ENST00000569073 466 ntBASIC2.38□□□□□ -2.03
CDH1P12830 AC004584.2-201ENST00000570407 410 ntBASIC2.38□□□□□ -2.03
CDH1P12830 AC104581.2-201ENST00000572227 430 ntBASIC2.38□□□□□ -2.03
CDH1P12830 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH1P12830 AC006023.1-201ENST00000603944 259 ntBASIC2.38□□□□□ -2.03
CDH1P12830 AC016925.2-201ENST00000605108 242 ntBASIC2.38□□□□□ -2.03
CDH1P12830 AC006157.1-201ENST00000611750 366 ntBASIC2.38□□□□□ -2.03
CDH1P12830 AC087588.2-201ENST00000617667 426 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms