Protein–RNA interactions for Protein: P12018

VPREB1, Immunoglobulin iota chain, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1P12018 AC090115.4-201ENST00000609970 188 ntBASIC2□□□□□ -2.09
VPREB1P12018 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2□□□□□ -2.09
VPREB1P12018 AC022513.1-201ENST00000624512 117 ntBASIC2□□□□□ -2.09
VPREB1P12018 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VPREB1P12018 AC108206.1-201ENST00000570186 4159 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 RNU6-1305P-201ENST00000364353 104 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 Y_RNA.263-201ENST00000364659 114 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 RNU6-245P-201ENST00000384020 107 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 RNU6-418P-201ENST00000384035 107 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 MIR190B-201ENST00000401119 79 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 MIR300-201ENST00000401138 83 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 MIR320B2-201ENST00000408479 138 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.99□□□□□ -2.09
VPREB1P12018 RPS29P4-201ENST00000414733 161 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 AC092423.1-201ENST00000430165 186 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 AL133547.1-201ENST00000448546 220 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 AC016717.1-201ENST00000448918 286 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 RPL30P15-201ENST00000457129 321 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 AC091179.3-201ENST00000474761 144 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 RN7SL633P-201ENST00000488974 297 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 AC097473.1-201ENST00000508142 408 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 AC026403.1-201ENST00000518938 295 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.99□□□□□ -2.09
VPREB1P12018 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.99□□□□□ -2.09
VPREB1P12018 AC004584.2-201ENST00000570407 410 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 MIR4753-201ENST00000585119 83 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 MIR1244-1-201ENST00000612829 85 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.99□□□□□ -2.09
VPREB1P12018 AC008873.1-201ENST00000625051 138 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 MIR1244-3-201ENST00000635744 85 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 MIR1244-2-201ENST00000636449 85 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 MIR1244-4-202ENST00000636813 85 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 ZNF702P-202ENST00000434269 1966 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 MTND5P16-201ENST00000460269 1703 ntBASIC1.99□□□□□ -2.09
VPREB1P12018 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.98□□□□□ -2.09
VPREB1P12018 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
VPREB1P12018 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC1.98□□□□□ -2.09
VPREB1P12018 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
VPREB1P12018 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
VPREB1P12018 RNA5SP50-201ENST00000363731 107 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 Y_RNA.259-201ENST00000364619 101 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 SNORD87-201ENST00000364849 89 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 Y_RNA.387-201ENST00000383918 102 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 SNORA18.3-201ENST00000384122 132 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 RNY4P36-201ENST00000391116 96 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 SNORA75.6-201ENST00000391318 127 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 AC016769.2-201ENST00000414815 475 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
VPREB1P12018 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC1.98□□□□□ -2.09
VPREB1P12018 AC018644.1-201ENST00000429934 551 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.98□□□□□ -2.09
VPREB1P12018 AC007395.1-201ENST00000451333 677 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 Y_RNA.653-201ENST00000459091 95 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 U8.22-201ENST00000459141 133 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.98□□□□□ -2.09
VPREB1P12018 RPS27AP9-201ENST00000477681 438 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 AP004217.1-201ENST00000480579 346 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC1.98□□□□□ -2.09
VPREB1P12018 AC110794.1-201ENST00000505816 425 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 RNU6-1114P-201ENST00000516022 107 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 RNU6-344P-201ENST00000516635 111 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 RNU6-307P-201ENST00000516743 106 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 AC007458.1-201ENST00000542812 373 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.98□□□□□ -2.09
VPREB1P12018 MIR5694-201ENST00000581190 76 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 AC005899.2-201ENST00000584353 90 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 MIR3922-201ENST00000585192 84 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
VPREB1P12018 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.98□□□□□ -2.09
VPREB1P12018 AC025253.1-201ENST00000613623 543 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.98□□□□□ -2.09
VPREB1P12018 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
VPREB1P12018 AC245060.5-201ENST00000610778 3293 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 CPD-202ENST00000543464 4007 ntTSL 2 BASIC1.97□□□□□ -2.09
VPREB1P12018 AC007336.1-201ENST00000576365 3828 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
VPREB1P12018 Y_RNA.132-201ENST00000363421 102 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 RNU6-137P-201ENST00000363680 108 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 RNU1-33P-201ENST00000364249 162 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 RNU6-99P-201ENST00000364721 107 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 Y_RNA.415-201ENST00000384012 112 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 SNORA67.2-201ENST00000384300 149 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 SNORA41-201ENST00000384675 132 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 MIR17-201ENST00000385012 84 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
VPREB1P12018 SNORA57.1-201ENST00000391227 145 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 RNU1-139P-201ENST00000391307 165 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 AL033519.2-201ENST00000403958 392 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 RNA5SP501-201ENST00000410990 112 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 MTCYBP10-201ENST00000424905 650 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.97□□□□□ -2.09
VPREB1P12018 GSTA11P-201ENST00000452866 669 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 RNU1-131P-201ENST00000458943 161 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 Y_RNA.632-201ENST00000459189 102 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 RNU7-87P-201ENST00000459343 62 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 RPL17P19-201ENST00000489069 552 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 AC022493.2-201ENST00000506122 481 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 RNU6-1198P-201ENST00000516904 67 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 IGKV3OR22-2-201ENST00000517943 313 ntBASIC1.97□□□□□ -2.09
VPREB1P12018 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms