Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.72□□□□□ -1.97
HOXC6P09630 IFNA11P-201ENST00000446352 526 ntBASIC2.72□□□□□ -1.97
HOXC6P09630 MTATP6P7-201ENST00000453315 681 ntBASIC2.72□□□□□ -1.97
HOXC6P09630 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC6P09630 AC015911.1-201ENST00000495111 156 ntBASIC2.72□□□□□ -1.97
HOXC6P09630 RPS27AP10-201ENST00000496103 208 ntBASIC2.72□□□□□ -1.97
HOXC6P09630 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC6P09630 AC026436.1-201ENST00000510537 270 ntBASIC2.72□□□□□ -1.97
HOXC6P09630 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC6P09630 RNU6-581P-201ENST00000516214 105 ntBASIC2.72□□□□□ -1.97
HOXC6P09630 HSBP1P1-201ENST00000555205 166 ntBASIC2.72□□□□□ -1.97
HOXC6P09630 MIR5696-201ENST00000578474 85 ntBASIC2.72□□□□□ -1.97
HOXC6P09630 MIR3609-201ENST00000582661 80 ntBASIC2.72□□□□□ -1.97
HOXC6P09630 AL606534.2-204ENST00000635008 178 ntBASIC2.72□□□□□ -1.97
HOXC6P09630 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.71□□□□□ -1.98
HOXC6P09630 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
HOXC6P09630 RNU6-238P-201ENST00000363313 106 ntBASIC2.71□□□□□ -1.98
HOXC6P09630 Y_RNA.123-201ENST00000363338 102 ntBASIC2.71□□□□□ -1.98
HOXC6P09630 RNU6-1027P-201ENST00000383998 107 ntBASIC2.71□□□□□ -1.98
HOXC6P09630 Y_RNA.455-201ENST00000384230 98 ntBASIC2.71□□□□□ -1.98
HOXC6P09630 RNU6-196P-201ENST00000384315 107 ntBASIC2.71□□□□□ -1.98
HOXC6P09630 RNU6-1035P-201ENST00000384477 107 ntBASIC2.71□□□□□ -1.98
HOXC6P09630 Y_RNA.577-201ENST00000384794 101 ntBASIC2.71□□□□□ -1.98
HOXC6P09630 RNU6-823P-201ENST00000391042 103 ntBASIC2.71□□□□□ -1.98
HOXC6P09630 RPS29P13-201ENST00000402041 169 ntBASIC2.71□□□□□ -1.98
HOXC6P09630 AC092423.1-201ENST00000430165 186 ntBASIC2.71□□□□□ -1.98
HOXC6P09630 AC116655.1-201ENST00000508324 901 ntBASIC2.71□□□□□ -1.98
HOXC6P09630 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXC6P09630 AC023442.1-201ENST00000531247 422 ntBASIC2.71□□□□□ -1.98
HOXC6P09630 AC113195.1-201ENST00000579952 141 ntBASIC2.71□□□□□ -1.98
HOXC6P09630 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.71□□□□□ -1.98
HOXC6P09630 AC087588.2-201ENST00000617667 426 ntBASIC2.71□□□□□ -1.98
HOXC6P09630 7SK.10-201ENST00000621414 298 ntBASIC2.71□□□□□ -1.98
HOXC6P09630 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXC6P09630 AC138305.3-201ENST00000624988 240 ntBASIC2.71□□□□□ -1.98
HOXC6P09630 MTND5P9-201ENST00000503854 1755 ntBASIC2.71□□□□□ -1.98
HOXC6P09630 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.7□□□□□ -1.98
HOXC6P09630 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HOXC6P09630 Y_RNA.47-201ENST00000362697 108 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 RNU6-105P-201ENST00000363909 104 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 RNU6-595P-201ENST00000363944 107 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 RNU4-42P-201ENST00000364738 142 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 CD24P4-201ENST00000382840 243 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 Y_RNA.512-201ENST00000384518 102 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 RNA5SP252-201ENST00000391131 119 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.7□□□□□ -1.98
HOXC6P09630 RNA5SP494-201ENST00000410653 129 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 RNA5SP344-201ENST00000411081 104 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.7□□□□□ -1.98
HOXC6P09630 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.7□□□□□ -1.98
HOXC6P09630 AC079354.2-201ENST00000453523 154 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 snoU13.28-201ENST00000459235 104 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 RPL23AP49-201ENST00000492925 468 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 AC114801.2-201ENST00000503825 781 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 RNU6-991P-201ENST00000516168 107 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 SNORA31.18-201ENST00000517043 134 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 MRPS36P4-201ENST00000534436 298 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 AMZ2P1-203ENST00000565833 850 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXC6P09630 AC009163.5-201ENST00000575421 637 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 MIR5701-3-201ENST00000578890 82 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXC6P09630 MIR5007-201ENST00000583098 95 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 MIR5188-201ENST00000583467 113 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 MIR5701-1-201ENST00000585138 82 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 AL355598.1-201ENST00000604169 202 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXC6P09630 AC009318.2-201ENST00000610917 651 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.7□□□□□ -1.98
HOXC6P09630 MIR5701-2-201ENST00000615634 82 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 SCARNA4-202ENST00000625402 129 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.7□□□□□ -1.98
HOXC6P09630 MIR4272-201ENST00000635924 64 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 AC069528.2-201ENST00000624849 1991 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 ZNF299P-201ENST00000406845 1804 ntBASIC2.7□□□□□ -1.98
HOXC6P09630 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.7□□□□□ -1.98
HOXC6P09630 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
HOXC6P09630 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.69□□□□□ -1.98
HOXC6P09630 RNU6-874P-201ENST00000362390 105 ntBASIC2.69□□□□□ -1.98
HOXC6P09630 Y_RNA.39-201ENST00000362620 98 ntBASIC2.69□□□□□ -1.98
HOXC6P09630 RNU6-227P-201ENST00000362865 103 ntBASIC2.69□□□□□ -1.98
HOXC6P09630 RNU6-505P-201ENST00000384427 107 ntBASIC2.69□□□□□ -1.98
HOXC6P09630 RNU6-482P-201ENST00000391068 107 ntBASIC2.69□□□□□ -1.98
HOXC6P09630 RPL21P75-201ENST00000396599 483 ntBASIC2.69□□□□□ -1.98
HOXC6P09630 MIR888-201ENST00000401186 77 ntBASIC2.69□□□□□ -1.98
HOXC6P09630 RPL21P28-201ENST00000401418 483 ntBASIC2.69□□□□□ -1.98
HOXC6P09630 FTH1P15-201ENST00000406984 280 ntBASIC2.69□□□□□ -1.98
HOXC6P09630 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
HOXC6P09630 RPL26P27-201ENST00000414397 437 ntBASIC2.69□□□□□ -1.98
HOXC6P09630 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXC6P09630 MTCYBP9-201ENST00000431021 303 ntBASIC2.69□□□□□ -1.98
HOXC6P09630 MTCO3P29-201ENST00000432119 779 ntBASIC2.69□□□□□ -1.98
HOXC6P09630 AL603825.1-201ENST00000438481 80 ntBASIC2.69□□□□□ -1.98
HOXC6P09630 AL031659.1-201ENST00000447075 539 ntBASIC2.69□□□□□ -1.98
HOXC6P09630 RPL21P39-201ENST00000463605 483 ntBASIC2.69□□□□□ -1.98
HOXC6P09630 AC087190.1-201ENST00000484462 480 ntBASIC2.69□□□□□ -1.98
HOXC6P09630 AC093591.1-201ENST00000491435 481 ntBASIC2.69□□□□□ -1.98
HOXC6P09630 RPL22P13-201ENST00000493291 347 ntBASIC2.69□□□□□ -1.98
HOXC6P09630 RPL21P16-201ENST00000495531 483 ntBASIC2.69□□□□□ -1.98
HOXC6P09630 RNU6-635P-201ENST00000516651 102 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms