Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 MIR6078-201ENST00000611069 100 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
ERCC1P07992 AL450472.1-202ENST00000637286 180 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.22□□□□□ -2.21
ERCC1P07992 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
ERCC1P07992 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
ERCC1P07992 Y_RNA.504-201ENST00000384481 104 ntBASIC1.21□□□□□ -2.22
ERCC1P07992 MIR548B-201ENST00000385247 97 ntBASIC1.21□□□□□ -2.22
ERCC1P07992 MIR758-201ENST00000390227 88 ntBASIC1.21□□□□□ -2.22
ERCC1P07992 AC010531.2-201ENST00000465012 153 ntBASIC1.21□□□□□ -2.22
ERCC1P07992 GMFBP1-201ENST00000467831 427 ntBASIC1.21□□□□□ -2.22
ERCC1P07992 RPL30P7-201ENST00000479312 323 ntBASIC1.21□□□□□ -2.22
ERCC1P07992 RPS23P5-201ENST00000495419 428 ntBASIC1.21□□□□□ -2.22
ERCC1P07992 AC008628.2-201ENST00000502605 298 ntBASIC1.21□□□□□ -2.22
ERCC1P07992 MTCYBP35-201ENST00000503630 1137 ntBASIC1.21□□□□□ -2.22
ERCC1P07992 AP005136.1-201ENST00000579765 429 ntBASIC1.21□□□□□ -2.22
ERCC1P07992 Z84480.1-201ENST00000605131 311 ntBASIC1.21□□□□□ -2.22
ERCC1P07992 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.21□□□□□ -2.22
ERCC1P07992 AC005520.5-201ENST00000613926 164 ntBASIC1.21□□□□□ -2.22
ERCC1P07992 AL078604.3-201ENST00000615580 211 ntBASIC1.21□□□□□ -2.22
ERCC1P07992 AL136221.1-201ENST00000621449 509 ntBASIC1.21□□□□□ -2.22
ERCC1P07992 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
ERCC1P07992 RNU1-96P-201ENST00000364163 162 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 SNORA63D-201ENST00000364359 132 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 Y_RNA.327-201ENST00000365201 102 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 RNU6-1127P-201ENST00000384580 107 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 SNORA40.3-201ENST00000390964 122 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 SNORA16.2-201ENST00000390991 127 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 AL121601.2-201ENST00000438019 707 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 AC069257.2-201ENST00000441819 155 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.2□□□□□ -2.22
ERCC1P07992 OR2AQ1P-201ENST00000451972 200 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 AC022364.2-201ENST00000457963 554 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 HMGN2P9-201ENST00000476875 229 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 MTND1P22-201ENST00000510572 951 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 AC084364.2-201ENST00000546924 395 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 AC009094.1-201ENST00000564443 426 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 AC090517.1-201ENST00000569307 266 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 MIR3937-201ENST00000580135 106 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 AC245014.2-201ENST00000603689 287 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 AP001836.1-201ENST00000604675 523 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 AC246785.4-201ENST00000605374 287 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 AC002044.1-201ENST00000606707 158 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 AC009994.1-201ENST00000606889 253 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 AC064807.4-201ENST00000607201 407 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 AC079248.2-201ENST00000623779 326 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 AC095038.3-201ENST00000634439 195 ntBASIC1.2□□□□□ -2.22
ERCC1P07992 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.19□□□□□ -2.22
ERCC1P07992 Y_RNA.132-201ENST00000363421 102 ntBASIC1.19□□□□□ -2.22
ERCC1P07992 RNU6-266P-201ENST00000364225 107 ntBASIC1.19□□□□□ -2.22
ERCC1P07992 RNU6-203P-201ENST00000384038 104 ntBASIC1.19□□□□□ -2.22
ERCC1P07992 MIR208B-201ENST00000401172 77 ntBASIC1.19□□□□□ -2.22
ERCC1P07992 MRPL35P1-201ENST00000404272 572 ntBASIC1.19□□□□□ -2.22
ERCC1P07992 RNU6-321P-201ENST00000410912 106 ntBASIC1.19□□□□□ -2.22
ERCC1P07992 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.19□□□□□ -2.22
ERCC1P07992 AL161935.2-201ENST00000414627 60 ntBASIC1.19□□□□□ -2.22
ERCC1P07992 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.19□□□□□ -2.22
ERCC1P07992 AC010099.3-201ENST00000423896 409 ntBASIC1.19□□□□□ -2.22
ERCC1P07992 MTCO3P29-201ENST00000432119 779 ntBASIC1.19□□□□□ -2.22
ERCC1P07992 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.19□□□□□ -2.22
ERCC1P07992 AL133217.1-201ENST00000450980 425 ntBASIC1.19□□□□□ -2.22
ERCC1P07992 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.19□□□□□ -2.22
ERCC1P07992 RPL31P58-201ENST00000469001 379 ntBASIC1.19□□□□□ -2.22
ERCC1P07992 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.19□□□□□ -2.22
ERCC1P07992 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.19□□□□□ -2.22
ERCC1P07992 RNU6-232P-201ENST00000517144 64 ntBASIC1.19□□□□□ -2.22
ERCC1P07992 AC069113.1-201ENST00000517763 267 ntBASIC1.19□□□□□ -2.22
ERCC1P07992 AC019176.1-201ENST00000518519 225 ntBASIC1.19□□□□□ -2.22
ERCC1P07992 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.19□□□□□ -2.22
ERCC1P07992 MTND5P35-201ENST00000557537 1720 ntBASIC1.19□□□□□ -2.22
ERCC1P07992 MTCO3P23-201ENST00000561363 289 ntBASIC1.19□□□□□ -2.22
ERCC1P07992 AC015688.6-201ENST00000577737 104 ntBASIC1.19□□□□□ -2.22
ERCC1P07992 MIR3941-201ENST00000582572 103 ntBASIC1.19□□□□□ -2.22
ERCC1P07992 MIR3976-201ENST00000606807 139 ntBASIC1.19□□□□□ -2.22
ERCC1P07992 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.19□□□□□ -2.22
ERCC1P07992 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.18□□□□□ -2.22
ERCC1P07992 Y_RNA.164-201ENST00000363709 102 ntBASIC1.18□□□□□ -2.22
ERCC1P07992 RNU6-553P-201ENST00000364047 96 ntBASIC1.18□□□□□ -2.22
ERCC1P07992 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.18□□□□□ -2.22
ERCC1P07992 EIF1P1-201ENST00000421436 341 ntBASIC1.18□□□□□ -2.22
ERCC1P07992 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.18□□□□□ -2.22
ERCC1P07992 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.18□□□□□ -2.22
ERCC1P07992 RNU7-125P-201ENST00000458760 62 ntBASIC1.18□□□□□ -2.22
ERCC1P07992 AL163973.1-201ENST00000484753 577 ntBASIC1.18□□□□□ -2.22
ERCC1P07992 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.18□□□□□ -2.22
ERCC1P07992 AC091874.1-201ENST00000511402 339 ntBASIC1.18□□□□□ -2.22
ERCC1P07992 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.18□□□□□ -2.22
ERCC1P07992 RN7SKP265-201ENST00000516448 223 ntBASIC1.18□□□□□ -2.22
ERCC1P07992 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.18□□□□□ -2.22
ERCC1P07992 RAB11AP2-201ENST00000545905 639 ntBASIC1.18□□□□□ -2.22
ERCC1P07992 AC019288.1-201ENST00000557918 224 ntBASIC1.18□□□□□ -2.22
ERCC1P07992 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.18□□□□□ -2.22
ERCC1P07992 MIR4781-201ENST00000585250 76 ntBASIC1.18□□□□□ -2.22
ERCC1P07992 AP003465.2-201ENST00000602571 373 ntBASIC1.18□□□□□ -2.22
ERCC1P07992 AL050303.3-201ENST00000613704 284 ntBASIC1.18□□□□□ -2.22
ERCC1P07992 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
ERCC1P07992 Y_RNA.4-201ENST00000362333 112 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms