Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC103996.1-201ENST00000555468 102 ntBASIC2.55□□□□□ -2
LDLRP01130 SNORD53-201ENST00000579969 78 ntBASIC2.55□□□□□ -2
LDLRP01130 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.55□□□□□ -2
LDLRP01130 MIR3668-201ENST00000582138 75 ntBASIC2.55□□□□□ -2
LDLRP01130 AL121917.1-203ENST00000605534 577 ntBASIC2.55□□□□□ -2
LDLRP01130 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.55□□□□□ -2
LDLRP01130 AC007792.1-201ENST00000623023 402 ntBASIC2.55□□□□□ -2
LDLRP01130 AC010297.1-201ENST00000623948 149 ntBASIC2.55□□□□□ -2
LDLRP01130 U4.7-201ENST00000638126 106 ntBASIC2.55□□□□□ -2
LDLRP01130 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.55□□□□□ -2
LDLRP01130 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.54□□□□□ -2
LDLRP01130 U8.2-201ENST00000363156 134 ntBASIC2.54□□□□□ -2
LDLRP01130 RNA5SP393-201ENST00000363423 117 ntBASIC2.54□□□□□ -2
LDLRP01130 Y_RNA.149-201ENST00000363558 117 ntBASIC2.54□□□□□ -2
LDLRP01130 Y_RNA.455-201ENST00000384230 98 ntBASIC2.54□□□□□ -2
LDLRP01130 RNU6-1222P-201ENST00000384615 107 ntBASIC2.54□□□□□ -2
LDLRP01130 RNU6-748P-201ENST00000384648 107 ntBASIC2.54□□□□□ -2
LDLRP01130 SNORA67.4-201ENST00000384688 142 ntBASIC2.54□□□□□ -2
LDLRP01130 AL513475.1-201ENST00000406602 315 ntBASIC2.54□□□□□ -2
LDLRP01130 MIR1302-3-201ENST00000408128 138 ntBASIC2.54□□□□□ -2
LDLRP01130 MRPS18CP6-201ENST00000423587 223 ntBASIC2.54□□□□□ -2
LDLRP01130 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.54□□□□□ -2
LDLRP01130 AC096644.2-201ENST00000429278 159 ntBASIC2.54□□□□□ -2
LDLRP01130 Z98742.2-201ENST00000431564 187 ntBASIC2.54□□□□□ -2
LDLRP01130 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.54□□□□□ -2
LDLRP01130 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.54□□□□□ -2
LDLRP01130 RPS3P1-201ENST00000456781 192 ntBASIC2.54□□□□□ -2
LDLRP01130 ANXA2P1-201ENST00000505539 926 ntBASIC2.54□□□□□ -2
LDLRP01130 AC022493.2-201ENST00000506122 481 ntBASIC2.54□□□□□ -2
LDLRP01130 AC096745.1-201ENST00000509945 370 ntBASIC2.54□□□□□ -2
LDLRP01130 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.54□□□□□ -2
LDLRP01130 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.54□□□□□ -2
LDLRP01130 RNU4-77P-201ENST00000516692 156 ntBASIC2.54□□□□□ -2
LDLRP01130 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.54□□□□□ -2
LDLRP01130 CR383656.8-201ENST00000549046 145 ntBASIC2.54□□□□□ -2
LDLRP01130 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.54□□□□□ -2
LDLRP01130 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.54□□□□□ -2
LDLRP01130 MIR5194-201ENST00000582634 120 ntBASIC2.54□□□□□ -2
LDLRP01130 SNORD58B-201ENST00000607313 66 ntBASIC2.54□□□□□ -2
LDLRP01130 AC138627.2-201ENST00000624202 601 ntBASIC2.54□□□□□ -2
LDLRP01130 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.54□□□□□ -2
LDLRP01130 MIR7515-201ENST00000637837 67 ntBASIC2.54□□□□□ -2
LDLRP01130 AC091812.1-201ENST00000432235 1948 ntBASIC2.54□□□□□ -2
LDLRP01130 RBBP8P1-201ENST00000449447 1844 ntBASIC2.54□□□□□ -2
LDLRP01130 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.54□□□□□ -2
LDLRP01130 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.53□□□□□ -2
LDLRP01130 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.53□□□□□ -2
LDLRP01130 Y_RNA.151-201ENST00000363566 112 ntBASIC2.53□□□□□ -2
LDLRP01130 RNA5SP68-201ENST00000363885 119 ntBASIC2.53□□□□□ -2
LDLRP01130 RNU6-461P-201ENST00000364195 107 ntBASIC2.53□□□□□ -2
LDLRP01130 RNU6-214P-201ENST00000384130 107 ntBASIC2.53□□□□□ -2
LDLRP01130 Y_RNA.574-201ENST00000384766 95 ntBASIC2.53□□□□□ -2
LDLRP01130 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.53□□□□□ -2
LDLRP01130 RNU6-1140P-201ENST00000410517 106 ntBASIC2.53□□□□□ -2
LDLRP01130 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
LDLRP01130 USMG5P1-201ENST00000425964 177 ntBASIC2.53□□□□□ -2
LDLRP01130 AL591043.1-201ENST00000432461 424 ntBASIC2.53□□□□□ -2
LDLRP01130 AL645568.3-201ENST00000433683 316 ntBASIC2.53□□□□□ -2
LDLRP01130 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.53□□□□□ -2
LDLRP01130 AK3P2-201ENST00000507976 429 ntBASIC2.53□□□□□ -2
LDLRP01130 AC109479.2-201ENST00000517842 174 ntBASIC2.53□□□□□ -2
LDLRP01130 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.53□□□□□ -2
LDLRP01130 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.53□□□□□ -2
LDLRP01130 AC092447.9-201ENST00000603395 144 ntBASIC2.53□□□□□ -2
LDLRP01130 ELOCP5-201ENST00000604924 333 ntBASIC2.53□□□□□ -2
LDLRP01130 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.53□□□□□ -2
LDLRP01130 MIR6817-201ENST00000615588 66 ntBASIC2.53□□□□□ -2
LDLRP01130 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LDLRP01130 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.53□□□□□ -2
LDLRP01130 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
LDLRP01130 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
LDLRP01130 Y_RNA.176-201ENST00000363815 109 ntBASIC2.52□□□□□ -2.01
LDLRP01130 RNU6-450P-201ENST00000364654 107 ntBASIC2.52□□□□□ -2.01
LDLRP01130 RNU6-702P-201ENST00000364982 107 ntBASIC2.52□□□□□ -2.01
LDLRP01130 RNU1-115P-201ENST00000365329 160 ntBASIC2.52□□□□□ -2.01
LDLRP01130 SNORA63.7-201ENST00000365579 123 ntBASIC2.52□□□□□ -2.01
LDLRP01130 RNU6-1329P-201ENST00000365664 107 ntBASIC2.52□□□□□ -2.01
LDLRP01130 Y_RNA.512-201ENST00000384518 102 ntBASIC2.52□□□□□ -2.01
LDLRP01130 RNA5SP210-201ENST00000391034 120 ntBASIC2.52□□□□□ -2.01
LDLRP01130 RNA5SP181-201ENST00000410246 98 ntBASIC2.52□□□□□ -2.01
LDLRP01130 AC074117.2-201ENST00000417130 397 ntBASIC2.52□□□□□ -2.01
LDLRP01130 AL117339.3-201ENST00000418733 162 ntBASIC2.52□□□□□ -2.01
LDLRP01130 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.52□□□□□ -2.01
LDLRP01130 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.52□□□□□ -2.01
LDLRP01130 SUMO1P4-201ENST00000429430 302 ntBASIC2.52□□□□□ -2.01
LDLRP01130 CHEK2P4-201ENST00000450340 246 ntBASIC2.52□□□□□ -2.01
LDLRP01130 AC010655.3-201ENST00000478818 450 ntBASIC2.52□□□□□ -2.01
LDLRP01130 SNORA31.23-201ENST00000517219 133 ntBASIC2.52□□□□□ -2.01
LDLRP01130 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.52□□□□□ -2.01
LDLRP01130 AC010186.2-204ENST00000537668 439 ntBASIC2.52□□□□□ -2.01
LDLRP01130 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.52□□□□□ -2.01
LDLRP01130 AL161670.1-201ENST00000554348 137 ntBASIC2.52□□□□□ -2.01
LDLRP01130 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.52□□□□□ -2.01
LDLRP01130 AL158827.2-201ENST00000602494 330 ntBASIC2.52□□□□□ -2.01
LDLRP01130 AL691447.3-201ENST00000635020 330 ntBASIC2.52□□□□□ -2.01
LDLRP01130 MIR3529-201ENST00000637713 78 ntBASIC2.52□□□□□ -2.01
LDLRP01130 AC005592.1-201ENST00000566527 1640 ntBASIC2.52□□□□□ -2.01
LDLRP01130 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
LDLRP01130 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
LDLRP01130 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms