Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MIR208B-201ENST00000401172 77 ntBASIC4.58□□□□□ -1.68
ALDH1A1P00352 SNORA79-201ENST00000408376 140 ntBASIC4.58□□□□□ -1.68
ALDH1A1P00352 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.58□□□□□ -1.68
ALDH1A1P00352 HSPE1P21-201ENST00000438283 308 ntBASIC4.58□□□□□ -1.68
ALDH1A1P00352 AC010285.1-201ENST00000470580 392 ntBASIC4.58□□□□□ -1.68
ALDH1A1P00352 AC018630.3-201ENST00000542637 96 ntBASIC4.58□□□□□ -1.68
ALDH1A1P00352 AC131055.1-201ENST00000584626 316 ntBASIC4.58□□□□□ -1.68
ALDH1A1P00352 MIR432-201ENST00000606207 94 ntBASIC4.58□□□□□ -1.68
ALDH1A1P00352 AC099778.2-201ENST00000610904 211 ntBASIC4.58□□□□□ -1.68
ALDH1A1P00352 MIR8069-1-201ENST00000616627 86 ntBASIC4.58□□□□□ -1.68
ALDH1A1P00352 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.58□□□□□ -1.68
ALDH1A1P00352 MIR8069-2-201ENST00000621412 86 ntBASIC4.58□□□□□ -1.68
ALDH1A1P00352 AC006065.5-201ENST00000623427 349 ntBASIC4.58□□□□□ -1.68
ALDH1A1P00352 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
ALDH1A1P00352 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
ALDH1A1P00352 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.58□□□□□ -1.68
ALDH1A1P00352 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
ALDH1A1P00352 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
ALDH1A1P00352 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
ALDH1A1P00352 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ALDH1A1P00352 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
ALDH1A1P00352 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ALDH1A1P00352 Y_RNA.281-201ENST00000364774 94 ntBASIC4.57□□□□□ -1.68
ALDH1A1P00352 SNORD87-201ENST00000364849 89 ntBASIC4.57□□□□□ -1.68
ALDH1A1P00352 RNA5SP504-201ENST00000410676 117 ntBASIC4.57□□□□□ -1.68
ALDH1A1P00352 AC004866.1-201ENST00000411748 78 ntBASIC4.57□□□□□ -1.68
ALDH1A1P00352 AC244098.2-201ENST00000422068 99 ntBASIC4.57□□□□□ -1.68
ALDH1A1P00352 HMGB1P22-201ENST00000505315 124 ntBASIC4.57□□□□□ -1.68
ALDH1A1P00352 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.57□□□□□ -1.68
ALDH1A1P00352 AC025754.2-201ENST00000606491 432 ntBASIC4.57□□□□□ -1.68
ALDH1A1P00352 AC025166.1-201ENST00000612411 163 ntBASIC4.57□□□□□ -1.68
ALDH1A1P00352 MIR3651-201ENST00000630427 90 ntBASIC4.57□□□□□ -1.68
ALDH1A1P00352 U6.115-201ENST00000636045 103 ntBASIC4.57□□□□□ -1.68
ALDH1A1P00352 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
ALDH1A1P00352 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
ALDH1A1P00352 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.57□□□□□ -1.68
ALDH1A1P00352 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ALDH1A1P00352 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ALDH1A1P00352 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ALDH1A1P00352 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
ALDH1A1P00352 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.56□□□□□ -1.68
ALDH1A1P00352 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ALDH1A1P00352 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ALDH1A1P00352 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ALDH1A1P00352 RNU6-766P-201ENST00000362478 107 ntBASIC4.56□□□□□ -1.68
ALDH1A1P00352 RNU6-136P-201ENST00000384663 107 ntBASIC4.56□□□□□ -1.68
ALDH1A1P00352 RNA5SP390-201ENST00000410191 113 ntBASIC4.56□□□□□ -1.68
ALDH1A1P00352 TOMM22P2-201ENST00000430735 237 ntBASIC4.56□□□□□ -1.68
ALDH1A1P00352 RNA5SP154-201ENST00000516193 111 ntBASIC4.56□□□□□ -1.68
ALDH1A1P00352 RNU6-344P-201ENST00000516635 111 ntBASIC4.56□□□□□ -1.68
ALDH1A1P00352 RNU7-143P-201ENST00000516781 65 ntBASIC4.56□□□□□ -1.68
ALDH1A1P00352 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.56□□□□□ -1.68
ALDH1A1P00352 AC009163.5-201ENST00000575421 637 ntBASIC4.56□□□□□ -1.68
ALDH1A1P00352 AC090897.2-201ENST00000581715 130 ntBASIC4.56□□□□□ -1.68
ALDH1A1P00352 MIR3922-201ENST00000585192 84 ntBASIC4.56□□□□□ -1.68
ALDH1A1P00352 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.56□□□□□ -1.68
ALDH1A1P00352 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
ALDH1A1P00352 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.56□□□□□ -1.68
ALDH1A1P00352 SCN1A-220ENST00000641603 12506 ntBASIC4.56□□□□□ -1.68
ALDH1A1P00352 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ALDH1A1P00352 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ALDH1A1P00352 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ALDH1A1P00352 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ALDH1A1P00352 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ALDH1A1P00352 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ALDH1A1P00352 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ALDH1A1P00352 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ALDH1A1P00352 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ALDH1A1P00352 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.55□□□□□ -1.68
ALDH1A1P00352 RNA5SP173-201ENST00000364857 136 ntBASIC4.55□□□□□ -1.68
ALDH1A1P00352 RNU6-217P-201ENST00000384164 104 ntBASIC4.55□□□□□ -1.68
ALDH1A1P00352 RNU6-622P-201ENST00000384272 103 ntBASIC4.55□□□□□ -1.68
ALDH1A1P00352 MIR325-201ENST00000385260 98 ntBASIC4.55□□□□□ -1.68
ALDH1A1P00352 SNORA36B-201ENST00000410438 131 ntBASIC4.55□□□□□ -1.68
ALDH1A1P00352 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.55□□□□□ -1.68
ALDH1A1P00352 RPL37P4-201ENST00000448908 268 ntBASIC4.55□□□□□ -1.68
ALDH1A1P00352 RN7SL601P-201ENST00000471221 293 ntBASIC4.55□□□□□ -1.68
ALDH1A1P00352 RN7SL271P-201ENST00000487601 295 ntBASIC4.55□□□□□ -1.68
ALDH1A1P00352 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.55□□□□□ -1.68
ALDH1A1P00352 RNU6-412P-201ENST00000516434 106 ntBASIC4.55□□□□□ -1.68
ALDH1A1P00352 Y_RNA.690-201ENST00000516603 95 ntBASIC4.55□□□□□ -1.68
ALDH1A1P00352 RNU6-197P-201ENST00000516680 100 ntBASIC4.55□□□□□ -1.68
ALDH1A1P00352 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.55□□□□□ -1.68
ALDH1A1P00352 AC062037.1-201ENST00000605302 128 ntBASIC4.55□□□□□ -1.68
ALDH1A1P00352 SNORD11B-201ENST00000607707 90 ntBASIC4.55□□□□□ -1.68
ALDH1A1P00352 MIR548AY-201ENST00000617669 107 ntBASIC4.55□□□□□ -1.68
ALDH1A1P00352 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
ALDH1A1P00352 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.55□□□□□ -1.68
ALDH1A1P00352 MIR7702-201ENST00000621931 59 ntBASIC4.55□□□□□ -1.68
ALDH1A1P00352 MIR1245B-201ENST00000636115 69 ntBASIC4.55□□□□□ -1.68
ALDH1A1P00352 AC068205.3-201ENST00000636385 468 ntBASIC4.55□□□□□ -1.68
ALDH1A1P00352 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
ALDH1A1P00352 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.55□□□□□ -1.68
ALDH1A1P00352 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
ALDH1A1P00352 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.55□□□□□ -1.68
ALDH1A1P00352 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
ALDH1A1P00352 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
ALDH1A1P00352 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ALDH1A1P00352 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ALDH1A1P00352 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms