Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.06□□□□□ -2.08
SIX3O95343 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.06□□□□□ -2.08
SIX3O95343 AC243960.4-201ENST00000600532 288 ntBASIC2.06□□□□□ -2.08
SIX3O95343 AF250324.2-201ENST00000608299 610 ntBASIC2.06□□□□□ -2.08
SIX3O95343 AP000553.5-201ENST00000641933 54 ntBASIC2.06□□□□□ -2.08
SIX3O95343 AC008555.8-201ENST00000623602 2168 ntBASIC2.06□□□□□ -2.08
SIX3O95343 Y_RNA.99-201ENST00000363138 105 ntBASIC2.05□□□□□ -2.08
SIX3O95343 SNORA36A-201ENST00000384221 132 ntBASIC2.05□□□□□ -2.08
SIX3O95343 SNORA51.11-201ENST00000384442 131 ntBASIC2.05□□□□□ -2.08
SIX3O95343 RNU6-1026P-201ENST00000384465 108 ntBASIC2.05□□□□□ -2.08
SIX3O95343 MIR514A2-201ENST00000385131 88 ntBASIC2.05□□□□□ -2.08
SIX3O95343 MIR514A3-201ENST00000385132 88 ntBASIC2.05□□□□□ -2.08
SIX3O95343 RNA5SP465-201ENST00000391195 109 ntBASIC2.05□□□□□ -2.08
SIX3O95343 MTCYBP2-201ENST00000407745 171 ntBASIC2.05□□□□□ -2.08
SIX3O95343 U3.40-201ENST00000408706 208 ntBASIC2.05□□□□□ -2.08
SIX3O95343 RNA5SP450-201ENST00000411206 102 ntBASIC2.05□□□□□ -2.08
SIX3O95343 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.05□□□□□ -2.08
SIX3O95343 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.05□□□□□ -2.08
SIX3O95343 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.05□□□□□ -2.08
SIX3O95343 MTND3P21-201ENST00000433774 331 ntBASIC2.05□□□□□ -2.08
SIX3O95343 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SIX3O95343 RPL23AP6-201ENST00000446637 472 ntBASIC2.05□□□□□ -2.08
SIX3O95343 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.05□□□□□ -2.08
SIX3O95343 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SIX3O95343 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.05□□□□□ -2.08
SIX3O95343 RPS27P21-201ENST00000486977 252 ntBASIC2.05□□□□□ -2.08
SIX3O95343 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.05□□□□□ -2.08
SIX3O95343 AC090255.1-201ENST00000495779 349 ntBASIC2.05□□□□□ -2.08
SIX3O95343 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.05□□□□□ -2.08
SIX3O95343 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.05□□□□□ -2.08
SIX3O95343 ZNF519P2-201ENST00000557032 169 ntBASIC2.05□□□□□ -2.08
SIX3O95343 AC090517.1-201ENST00000569307 266 ntBASIC2.05□□□□□ -2.08
SIX3O95343 AC093783.1-201ENST00000612976 329 ntBASIC2.05□□□□□ -2.08
SIX3O95343 MIR6779-201ENST00000617283 64 ntBASIC2.05□□□□□ -2.08
SIX3O95343 AL136221.1-201ENST00000621449 509 ntBASIC2.05□□□□□ -2.08
SIX3O95343 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.05□□□□□ -2.08
SIX3O95343 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SIX3O95343 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SIX3O95343 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
SIX3O95343 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.04□□□□□ -2.08
SIX3O95343 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SIX3O95343 Y_RNA.41-201ENST00000362646 102 ntBASIC2.04□□□□□ -2.08
SIX3O95343 RNU6-1252P-201ENST00000363054 104 ntBASIC2.04□□□□□ -2.08
SIX3O95343 RNU6-23P-201ENST00000363283 107 ntBASIC2.04□□□□□ -2.08
SIX3O95343 Y_RNA.123-201ENST00000363338 102 ntBASIC2.04□□□□□ -2.08
SIX3O95343 RNU4-40P-201ENST00000364351 143 ntBASIC2.04□□□□□ -2.08
SIX3O95343 SNORD32B-201ENST00000364460 84 ntBASIC2.04□□□□□ -2.08
SIX3O95343 RNU6-790P-201ENST00000384479 105 ntBASIC2.04□□□□□ -2.08
SIX3O95343 RNU6-160P-201ENST00000384591 107 ntBASIC2.04□□□□□ -2.08
SIX3O95343 RNU6-1093P-201ENST00000391194 107 ntBASIC2.04□□□□□ -2.08
SIX3O95343 AC012306.1-201ENST00000423267 114 ntBASIC2.04□□□□□ -2.08
SIX3O95343 UBE2V1P4-201ENST00000425374 344 ntBASIC2.04□□□□□ -2.08
SIX3O95343 AC021146.2-201ENST00000504736 556 ntBASIC2.04□□□□□ -2.08
SIX3O95343 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.04□□□□□ -2.08
SIX3O95343 MTND1P35-201ENST00000526739 508 ntBASIC2.04□□□□□ -2.08
SIX3O95343 AC109635.3-201ENST00000529536 185 ntBASIC2.04□□□□□ -2.08
SIX3O95343 AC146944.4-201ENST00000602697 718 ntBASIC2.04□□□□□ -2.08
SIX3O95343 PCGEM1.1-201ENST00000613431 131 ntBASIC2.04□□□□□ -2.08
SIX3O95343 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.04□□□□□ -2.08
SIX3O95343 MIR1321-201ENST00000637766 79 ntBASIC2.04□□□□□ -2.08
SIX3O95343 AC092881.1-201ENST00000638218 2733 ntBASIC2.04□□□□□ -2.08
SIX3O95343 AC027514.1-201ENST00000588561 1603 ntBASIC2.03□□□□□ -2.08
SIX3O95343 Y_RNA.9-201ENST00000362354 101 ntBASIC2.03□□□□□ -2.08
SIX3O95343 Y_RNA.224-201ENST00000364308 111 ntBASIC2.03□□□□□ -2.08
SIX3O95343 RNA5SP37-201ENST00000365420 130 ntBASIC2.03□□□□□ -2.08
SIX3O95343 Y_RNA.402-201ENST00000383972 102 ntBASIC2.03□□□□□ -2.08
SIX3O95343 RNU6-378P-201ENST00000384324 107 ntBASIC2.03□□□□□ -2.08
SIX3O95343 MIR597-201ENST00000384968 97 ntBASIC2.03□□□□□ -2.08
SIX3O95343 MIR181A1-201ENST00000385026 110 ntBASIC2.03□□□□□ -2.08
SIX3O95343 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SIX3O95343 MIR676-201ENST00000390702 67 ntBASIC2.03□□□□□ -2.08
SIX3O95343 FGF7P8-201ENST00000402994 292 ntBASIC2.03□□□□□ -2.08
SIX3O95343 SNORA11.4-201ENST00000408823 129 ntBASIC2.03□□□□□ -2.08
SIX3O95343 AC096920.1-201ENST00000423991 241 ntBASIC2.03□□□□□ -2.08
SIX3O95343 HMGN2P19-201ENST00000425149 265 ntBASIC2.03□□□□□ -2.08
SIX3O95343 HMGN2P18-201ENST00000450680 270 ntBASIC2.03□□□□□ -2.08
SIX3O95343 AC025033.1-201ENST00000463883 194 ntBASIC2.03□□□□□ -2.08
SIX3O95343 MTCO1P29-201ENST00000496868 288 ntBASIC2.03□□□□□ -2.08
SIX3O95343 AC092436.3-201ENST00000511788 257 ntBASIC2.03□□□□□ -2.08
SIX3O95343 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.03□□□□□ -2.08
SIX3O95343 AK6P1-201ENST00000540219 478 ntBASIC2.03□□□□□ -2.08
SIX3O95343 EIF4A1P12-201ENST00000551910 141 ntBASIC2.03□□□□□ -2.08
SIX3O95343 SNRPGP18-201ENST00000553000 214 ntBASIC2.03□□□□□ -2.08
SIX3O95343 AL078605.1-201ENST00000603529 500 ntBASIC2.03□□□□□ -2.08
SIX3O95343 AC005034.5-201ENST00000604219 466 ntBASIC2.03□□□□□ -2.08
SIX3O95343 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.03□□□□□ -2.08
SIX3O95343 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
SIX3O95343 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
SIX3O95343 AC121333.1-201ENST00000567488 2709 ntBASIC2.03□□□□□ -2.09
SIX3O95343 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
SIX3O95343 RNU1-58P-201ENST00000362413 163 ntBASIC2.02□□□□□ -2.09
SIX3O95343 Y_RNA.38-201ENST00000362617 102 ntBASIC2.02□□□□□ -2.09
SIX3O95343 SNORD113-7-201ENST00000363762 77 ntBASIC2.02□□□□□ -2.09
SIX3O95343 RNU6-1090P-201ENST00000364065 94 ntBASIC2.02□□□□□ -2.09
SIX3O95343 SNORA26.3-201ENST00000391119 136 ntBASIC2.02□□□□□ -2.09
SIX3O95343 AL023284.1-201ENST00000403956 276 ntBASIC2.02□□□□□ -2.09
SIX3O95343 RNA5SP494-201ENST00000410653 129 ntBASIC2.02□□□□□ -2.09
SIX3O95343 Y_RNA.615-201ENST00000410769 117 ntBASIC2.02□□□□□ -2.09
SIX3O95343 RNU6-325P-201ENST00000411132 105 ntBASIC2.02□□□□□ -2.09
SIX3O95343 AL139156.1-201ENST00000412785 841 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms