Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 RSL24D1P11-201ENST00000591045 491 ntBASIC1.27□□□□□ -2.21
SNX4O95219 AL353149.1-201ENST00000610667 244 ntBASIC1.27□□□□□ -2.21
SNX4O95219 AC136475.10-201ENST00000620253 385 ntBASIC1.27□□□□□ -2.21
SNX4O95219 AL359697.1-201ENST00000624879 587 ntBASIC1.27□□□□□ -2.21
SNX4O95219 AC091812.1-201ENST00000432235 1948 ntBASIC1.27□□□□□ -2.21
SNX4O95219 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SNX4O95219 RNU6-1029P-201ENST00000384109 107 ntBASIC1.26□□□□□ -2.21
SNX4O95219 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.26□□□□□ -2.21
SNX4O95219 MIR300-201ENST00000401138 83 ntBASIC1.26□□□□□ -2.21
SNX4O95219 MIR208B-201ENST00000401172 77 ntBASIC1.26□□□□□ -2.21
SNX4O95219 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.26□□□□□ -2.21
SNX4O95219 AL593851.1-201ENST00000426171 157 ntBASIC1.26□□□□□ -2.21
SNX4O95219 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.26□□□□□ -2.21
SNX4O95219 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.26□□□□□ -2.21
SNX4O95219 AC132479.1-201ENST00000449160 144 ntBASIC1.26□□□□□ -2.21
SNX4O95219 MTCO2P6-201ENST00000463134 685 ntBASIC1.26□□□□□ -2.21
SNX4O95219 GMFBP1-201ENST00000467831 427 ntBASIC1.26□□□□□ -2.21
SNX4O95219 AC067942.3-201ENST00000512025 362 ntBASIC1.26□□□□□ -2.21
SNX4O95219 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.26□□□□□ -2.21
SNX4O95219 RNU7-40P-201ENST00000516397 64 ntBASIC1.26□□□□□ -2.21
SNX4O95219 MRPS36P3-201ENST00000519284 130 ntBASIC1.26□□□□□ -2.21
SNX4O95219 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.26□□□□□ -2.21
SNX4O95219 CYP3A52P-201ENST00000563326 91 ntBASIC1.26□□□□□ -2.21
SNX4O95219 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.26□□□□□ -2.21
SNX4O95219 AP001836.1-201ENST00000604675 523 ntBASIC1.26□□□□□ -2.21
SNX4O95219 AC016727.1-205ENST00000605437 569 ntBASIC1.26□□□□□ -2.21
SNX4O95219 AC099654.5-201ENST00000636479 350 ntBASIC1.26□□□□□ -2.21
SNX4O95219 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
SNX4O95219 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SNX4O95219 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
SNX4O95219 RNA5SP327-201ENST00000362494 101 ntBASIC1.25□□□□□ -2.21
SNX4O95219 SNORA72.2-201ENST00000365028 127 ntBASIC1.25□□□□□ -2.21
SNX4O95219 Y_RNA.338-201ENST00000365320 114 ntBASIC1.25□□□□□ -2.21
SNX4O95219 RNU6-877P-201ENST00000383868 107 ntBASIC1.25□□□□□ -2.21
SNX4O95219 RNU6-203P-201ENST00000384038 104 ntBASIC1.25□□□□□ -2.21
SNX4O95219 MIR194-1-201ENST00000384892 85 ntBASIC1.25□□□□□ -2.21
SNX4O95219 RPL23AP36-201ENST00000413895 458 ntBASIC1.25□□□□□ -2.21
SNX4O95219 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.25□□□□□ -2.21
SNX4O95219 TOMM22P2-201ENST00000430735 237 ntBASIC1.25□□□□□ -2.21
SNX4O95219 AC092473.1-201ENST00000441098 221 ntBASIC1.25□□□□□ -2.21
SNX4O95219 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.25□□□□□ -2.21
SNX4O95219 PGBD4P5-201ENST00000445958 426 ntBASIC1.25□□□□□ -2.21
SNX4O95219 AC022364.2-201ENST00000457963 554 ntBASIC1.25□□□□□ -2.21
SNX4O95219 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.25□□□□□ -2.21
SNX4O95219 AL163973.1-201ENST00000484753 577 ntBASIC1.25□□□□□ -2.21
SNX4O95219 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.25□□□□□ -2.21
SNX4O95219 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.25□□□□□ -2.21
SNX4O95219 RNU2-69P-201ENST00000516061 100 ntBASIC1.25□□□□□ -2.21
SNX4O95219 AC103996.1-201ENST00000555468 102 ntBASIC1.25□□□□□ -2.21
SNX4O95219 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.25□□□□□ -2.21
SNX4O95219 AC006566.1-201ENST00000608943 513 ntBASIC1.25□□□□□ -2.21
SNX4O95219 AC008147.4-201ENST00000617570 1204 ntBASIC1.25□□□□□ -2.21
SNX4O95219 AL450472.1-202ENST00000637286 180 ntBASIC1.25□□□□□ -2.21
SNX4O95219 RNU6-827P-201ENST00000365553 106 ntBASIC1.24□□□□□ -2.21
SNX4O95219 SNORD70.1-201ENST00000391007 85 ntBASIC1.24□□□□□ -2.21
SNX4O95219 AL117342.1-201ENST00000404861 406 ntBASIC1.24□□□□□ -2.21
SNX4O95219 AC004965.1-201ENST00000413033 213 ntBASIC1.24□□□□□ -2.21
SNX4O95219 AC012306.1-201ENST00000423267 114 ntBASIC1.24□□□□□ -2.21
SNX4O95219 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.24□□□□□ -2.21
SNX4O95219 USP9YP28-201ENST00000435142 589 ntBASIC1.24□□□□□ -2.21
SNX4O95219 RPS26P45-201ENST00000471748 340 ntBASIC1.24□□□□□ -2.21
SNX4O95219 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.24□□□□□ -2.21
SNX4O95219 AC005178.1-201ENST00000508392 440 ntBASIC1.24□□□□□ -2.21
SNX4O95219 SNORA25.17-201ENST00000517184 124 ntBASIC1.24□□□□□ -2.21
SNX4O95219 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.24□□□□□ -2.21
SNX4O95219 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.24□□□□□ -2.21
SNX4O95219 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.24□□□□□ -2.21
SNX4O95219 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.24□□□□□ -2.21
SNX4O95219 AC023043.2-201ENST00000589678 1026 ntBASIC1.24□□□□□ -2.21
SNX4O95219 AC092354.1-201ENST00000606057 376 ntBASIC1.24□□□□□ -2.21
SNX4O95219 AC016597.2-201ENST00000613256 341 ntBASIC1.24□□□□□ -2.21
SNX4O95219 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SNX4O95219 AL391987.6-201ENST00000305671 199 ntBASIC1.23□□□□□ -2.21
SNX4O95219 RNU4-48P-201ENST00000365559 182 ntBASIC1.23□□□□□ -2.21
SNX4O95219 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.23□□□□□ -2.21
SNX4O95219 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.23□□□□□ -2.21
SNX4O95219 AC011406.1-201ENST00000512440 370 ntBASIC1.23□□□□□ -2.21
SNX4O95219 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SNX4O95219 MTND2P32-201ENST00000521584 1038 ntBASIC1.23□□□□□ -2.21
SNX4O95219 AL512310.8-201ENST00000550183 120 ntBASIC1.23□□□□□ -2.21
SNX4O95219 AC068338.1-201ENST00000565567 176 ntBASIC1.23□□□□□ -2.21
SNX4O95219 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.23□□□□□ -2.21
SNX4O95219 AC068787.1-201ENST00000623908 691 ntBASIC1.23□□□□□ -2.21
SNX4O95219 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SNX4O95219 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.23□□□□□ -2.21
SNX4O95219 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SNX4O95219 RNU6-562P-201ENST00000362731 107 ntBASIC1.22□□□□□ -2.21
SNX4O95219 RNU6-331P-201ENST00000384724 107 ntBASIC1.22□□□□□ -2.21
SNX4O95219 AP000275.1-201ENST00000411943 390 ntBASIC1.22□□□□□ -2.21
SNX4O95219 MTND3P17-201ENST00000416968 344 ntBASIC1.22□□□□□ -2.21
SNX4O95219 ISCA1P6-201ENST00000427740 390 ntBASIC1.22□□□□□ -2.21
SNX4O95219 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.22□□□□□ -2.21
SNX4O95219 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.22□□□□□ -2.21
SNX4O95219 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SNX4O95219 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.22□□□□□ -2.21
SNX4O95219 RN7SKP179-201ENST00000516126 217 ntBASIC1.22□□□□□ -2.21
SNX4O95219 MIR4709-201ENST00000577272 72 ntBASIC1.22□□□□□ -2.21
SNX4O95219 MIR4703-201ENST00000577728 79 ntBASIC1.22□□□□□ -2.21
SNX4O95219 CTHRC1P1-201ENST00000605383 469 ntBASIC1.22□□□□□ -2.21
SNX4O95219 MIR98-201ENST00000606724 119 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms