Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU6-1285P-201ENST00000363480 105 ntBASIC2.3□□□□□ -2.04
PRKNO60260 RNA5SP126-201ENST00000365092 109 ntBASIC2.3□□□□□ -2.04
PRKNO60260 RNU6-1286P-201ENST00000383871 107 ntBASIC2.3□□□□□ -2.04
PRKNO60260 RNU6-142P-201ENST00000384019 107 ntBASIC2.3□□□□□ -2.04
PRKNO60260 RNU6-1083P-201ENST00000384022 107 ntBASIC2.3□□□□□ -2.04
PRKNO60260 SNORA29-201ENST00000384183 140 ntBASIC2.3□□□□□ -2.04
PRKNO60260 MIR186-201ENST00000384988 86 ntBASIC2.3□□□□□ -2.04
PRKNO60260 AL139095.1-201ENST00000404326 391 ntBASIC2.3□□□□□ -2.04
PRKNO60260 RN7SKP61-201ENST00000410642 295 ntBASIC2.3□□□□□ -2.04
PRKNO60260 PMCHL1-202ENST00000423102 261 ntBASIC2.3□□□□□ -2.04
PRKNO60260 MTCO3P29-201ENST00000432119 779 ntBASIC2.3□□□□□ -2.04
PRKNO60260 Z82188.1-201ENST00000436709 154 ntBASIC2.3□□□□□ -2.04
PRKNO60260 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.3□□□□□ -2.04
PRKNO60260 GSTA11P-201ENST00000452866 669 ntBASIC2.3□□□□□ -2.04
PRKNO60260 AC090096.1-201ENST00000489168 390 ntBASIC2.3□□□□□ -2.04
PRKNO60260 SNORA31.16-201ENST00000516773 139 ntBASIC2.3□□□□□ -2.04
PRKNO60260 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.3□□□□□ -2.04
PRKNO60260 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.3□□□□□ -2.04
PRKNO60260 AC073410.2-201ENST00000603240 332 ntBASIC2.3□□□□□ -2.04
PRKNO60260 U4.3-201ENST00000621047 82 ntBASIC2.3□□□□□ -2.04
PRKNO60260 MIR7515-201ENST00000637837 67 ntBASIC2.3□□□□□ -2.04
PRKNO60260 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
PRKNO60260 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PRKNO60260 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
PRKNO60260 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.3□□□□□ -2.04
PRKNO60260 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.3□□□□□ -2.04
PRKNO60260 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
PRKNO60260 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
PRKNO60260 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PRKNO60260 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.29□□□□□ -2.04
PRKNO60260 Z75746.1-201ENST00000440243 2080 ntBASIC2.29□□□□□ -2.04
PRKNO60260 AC092268.1-201ENST00000342691 405 ntBASIC2.29□□□□□ -2.04
PRKNO60260 SNORA22B-201ENST00000383876 138 ntBASIC2.29□□□□□ -2.04
PRKNO60260 Y_RNA.428-201ENST00000384078 102 ntBASIC2.29□□□□□ -2.04
PRKNO60260 Y_RNA.496-201ENST00000384444 101 ntBASIC2.29□□□□□ -2.04
PRKNO60260 RNA5SP494-201ENST00000410653 129 ntBASIC2.29□□□□□ -2.04
PRKNO60260 HMGN2P35-201ENST00000412164 270 ntBASIC2.29□□□□□ -2.04
PRKNO60260 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.29□□□□□ -2.04
PRKNO60260 AC097463.2-201ENST00000421074 142 ntBASIC2.29□□□□□ -2.04
PRKNO60260 AL590135.1-201ENST00000422215 156 ntBASIC2.29□□□□□ -2.04
PRKNO60260 AL358453.1-201ENST00000422522 250 ntBASIC2.29□□□□□ -2.04
PRKNO60260 AC019205.3-201ENST00000424573 156 ntBASIC2.29□□□□□ -2.04
PRKNO60260 AC078809.1-201ENST00000427601 140 ntBASIC2.29□□□□□ -2.04
PRKNO60260 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.29□□□□□ -2.04
PRKNO60260 AC092423.1-201ENST00000430165 186 ntBASIC2.29□□□□□ -2.04
PRKNO60260 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.29□□□□□ -2.04
PRKNO60260 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.29□□□□□ -2.04
PRKNO60260 AC016700.2-201ENST00000446011 156 ntBASIC2.29□□□□□ -2.04
PRKNO60260 AL035666.1-201ENST00000446195 348 ntBASIC2.29□□□□□ -2.04
PRKNO60260 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.29□□□□□ -2.04
PRKNO60260 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.29□□□□□ -2.04
PRKNO60260 AL163540.1-201ENST00000485382 386 ntBASIC2.29□□□□□ -2.04
PRKNO60260 RPL22P13-201ENST00000493291 347 ntBASIC2.29□□□□□ -2.04
PRKNO60260 AC015911.1-201ENST00000495111 156 ntBASIC2.29□□□□□ -2.04
PRKNO60260 AC021146.2-201ENST00000504736 556 ntBASIC2.29□□□□□ -2.04
PRKNO60260 RPPH1-2P-201ENST00000516688 293 ntBASIC2.29□□□□□ -2.04
PRKNO60260 Y_RNA.711-201ENST00000516993 102 ntBASIC2.29□□□□□ -2.04
PRKNO60260 RN7SKP40-201ENST00000517211 242 ntBASIC2.29□□□□□ -2.04
PRKNO60260 RN7SKP295-201ENST00000517264 153 ntBASIC2.29□□□□□ -2.04
PRKNO60260 AL590705.4-201ENST00000532209 134 ntBASIC2.29□□□□□ -2.04
PRKNO60260 AC079598.5-201ENST00000547460 117 ntBASIC2.29□□□□□ -2.04
PRKNO60260 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.29□□□□□ -2.04
PRKNO60260 SUB1P3-201ENST00000564581 315 ntBASIC2.29□□□□□ -2.04
PRKNO60260 AC004584.2-201ENST00000570407 410 ntBASIC2.29□□□□□ -2.04
PRKNO60260 MIR5701-3-201ENST00000578890 82 ntBASIC2.29□□□□□ -2.04
PRKNO60260 AC103810.1-201ENST00000579873 453 ntBASIC2.29□□□□□ -2.04
PRKNO60260 MIR5701-1-201ENST00000585138 82 ntBASIC2.29□□□□□ -2.04
PRKNO60260 MIR1244-1-201ENST00000612829 85 ntBASIC2.29□□□□□ -2.04
PRKNO60260 MIR5701-2-201ENST00000615634 82 ntBASIC2.29□□□□□ -2.04
PRKNO60260 AL159153.1-201ENST00000619688 317 ntBASIC2.29□□□□□ -2.04
PRKNO60260 MIR1244-3-201ENST00000635744 85 ntBASIC2.29□□□□□ -2.04
PRKNO60260 MIR1244-2-201ENST00000636449 85 ntBASIC2.29□□□□□ -2.04
PRKNO60260 MIR1244-4-202ENST00000636813 85 ntBASIC2.29□□□□□ -2.04
PRKNO60260 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PRKNO60260 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.29□□□□□ -2.04
PRKNO60260 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PRKNO60260 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PRKNO60260 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
PRKNO60260 RNA5SP456-201ENST00000364002 114 ntBASIC2.28□□□□□ -2.04
PRKNO60260 SNORA68.1-201ENST00000364537 132 ntBASIC2.28□□□□□ -2.04
PRKNO60260 Y_RNA.252-201ENST00000364556 101 ntBASIC2.28□□□□□ -2.04
PRKNO60260 RNU4-9P-201ENST00000364951 139 ntBASIC2.28□□□□□ -2.04
PRKNO60260 Y_RNA.314-201ENST00000365114 102 ntBASIC2.28□□□□□ -2.04
PRKNO60260 RNU1-57P-201ENST00000384491 166 ntBASIC2.28□□□□□ -2.04
PRKNO60260 Y_RNA.577-201ENST00000384794 101 ntBASIC2.28□□□□□ -2.04
PRKNO60260 RNU6-700P-201ENST00000391043 107 ntBASIC2.28□□□□□ -2.04
PRKNO60260 RNU6-1156P-201ENST00000410365 100 ntBASIC2.28□□□□□ -2.04
PRKNO60260 AC018865.2-201ENST00000423631 129 ntBASIC2.28□□□□□ -2.04
PRKNO60260 AC008267.5-201ENST00000424928 265 ntBASIC2.28□□□□□ -2.04
PRKNO60260 AC092427.1-202ENST00000430569 476 ntBASIC2.28□□□□□ -2.04
PRKNO60260 TOMM22P6-201ENST00000465035 409 ntBASIC2.28□□□□□ -2.04
PRKNO60260 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.28□□□□□ -2.04
PRKNO60260 RPL23AP75-201ENST00000491601 451 ntBASIC2.28□□□□□ -2.04
PRKNO60260 AF186996.7-201ENST00000492781 209 ntBASIC2.28□□□□□ -2.04
PRKNO60260 RNU5F-2P-201ENST00000516066 82 ntBASIC2.28□□□□□ -2.04
PRKNO60260 SNORD116.3-201ENST00000517176 78 ntBASIC2.28□□□□□ -2.04
PRKNO60260 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.28□□□□□ -2.04
PRKNO60260 AC115990.1-201ENST00000526957 301 ntBASIC2.28□□□□□ -2.04
PRKNO60260 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.28□□□□□ -2.04
PRKNO60260 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms