Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 RNU6-360P-201ENST00000390944 104 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 RNU2-29P-201ENST00000410423 189 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 MTND2P18-201ENST00000419962 1030 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 AL354695.1-201ENST00000427935 228 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 Z82205.1-201ENST00000428456 297 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.31□□□□□ -2.2
CLOCKO15516 AC092473.1-201ENST00000441098 221 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 JTBP1-201ENST00000441314 247 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 SNRPGP9-201ENST00000456025 225 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.31□□□□□ -2.2
CLOCKO15516 AC016925.1-201ENST00000458303 298 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 AC005840.1-201ENST00000498412 377 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 AC008628.2-201ENST00000502605 298 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 AC098862.1-201ENST00000504991 413 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.31□□□□□ -2.2
CLOCKO15516 SNORD60.2-201ENST00000516883 86 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 RNU6-445P-201ENST00000516949 107 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 AP002963.1-201ENST00000530590 184 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 AC021231.3-201ENST00000558497 370 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 HMGB1P33-201ENST00000563485 527 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 Z98751.3-201ENST00000604447 521 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 AP001836.1-201ENST00000604675 523 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 AP001485.1-201ENST00000604799 199 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 AL359821.1-201ENST00000605519 182 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 AC136475.10-201ENST00000620253 385 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 AL391262.2-201ENST00000622466 494 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CLOCKO15516 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
CLOCKO15516 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CLOCKO15516 ZNF209P-201ENST00000593450 2304 ntBASIC1.31□□□□□ -2.2
CLOCKO15516 AL159152.1-201ENST00000635019 2587 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 Y_RNA.504-201ENST00000384481 104 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 MIR520A-201ENST00000384862 85 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 RNU6-321P-201ENST00000410912 106 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 RNA5SP247-201ENST00000411181 105 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 AC004965.1-201ENST00000413033 213 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.3□□□□□ -2.2
CLOCKO15516 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.3□□□□□ -2.2
CLOCKO15516 EBAG9P1-201ENST00000418955 543 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.3□□□□□ -2.2
CLOCKO15516 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.3□□□□□ -2.2
CLOCKO15516 FTH1P12-201ENST00000432137 551 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 HSPE1P9-201ENST00000440046 311 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 SNRPGP13-201ENST00000442212 177 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 AC007395.1-201ENST00000451333 677 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 RPL9P9-202ENST00000466501 579 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 RPL36AP21-201ENST00000490372 323 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 AC091874.1-201ENST00000511402 339 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 RNA5SP445-201ENST00000515889 115 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 RNU6-902P-201ENST00000517212 91 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.3□□□□□ -2.2
CLOCKO15516 AL161670.1-201ENST00000554348 137 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.3□□□□□ -2.2
CLOCKO15516 AC069114.2-201ENST00000604699 304 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 AC005520.5-201ENST00000613926 164 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 AC083806.3-201ENST00000614016 455 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 AL157834.3-201ENST00000615543 103 ntBASIC1.3□□□□□ -2.2
CLOCKO15516 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CLOCKO15516 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.3□□□□□ -2.2
CLOCKO15516 RNU1-76P-201ENST00000362903 159 ntBASIC1.29□□□□□ -2.2
CLOCKO15516 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
CLOCKO15516 MTCO1P21-201ENST00000416634 589 ntBASIC1.29□□□□□ -2.2
CLOCKO15516 MTCO2P34-201ENST00000421994 607 ntBASIC1.29□□□□□ -2.2
CLOCKO15516 AC099677.2-201ENST00000436385 175 ntBASIC1.29□□□□□ -2.2
CLOCKO15516 ATP5J2P3-201ENST00000451550 258 ntBASIC1.29□□□□□ -2.2
CLOCKO15516 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.29□□□□□ -2.2
CLOCKO15516 RPL31P58-201ENST00000469001 379 ntBASIC1.29□□□□□ -2.2
CLOCKO15516 RPS26P55-201ENST00000471178 356 ntBASIC1.29□□□□□ -2.2
CLOCKO15516 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.29□□□□□ -2.2
CLOCKO15516 AC105417.1-201ENST00000514691 285 ntBASIC1.29□□□□□ -2.2
CLOCKO15516 AC060788.1-201ENST00000521318 469 ntBASIC1.29□□□□□ -2.2
CLOCKO15516 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.29□□□□□ -2.2
CLOCKO15516 AC064807.4-201ENST00000607201 407 ntBASIC1.29□□□□□ -2.2
CLOCKO15516 AP001596.2-201ENST00000608410 312 ntBASIC1.29□□□□□ -2.2
CLOCKO15516 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.29□□□□□ -2.2
CLOCKO15516 AC010615.1-201ENST00000594254 1764 ntBASIC1.29□□□□□ -2.2
CLOCKO15516 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
CLOCKO15516 SNORA7.1-201ENST00000363750 139 ntBASIC1.28□□□□□ -2.2
CLOCKO15516 RNU4-13P-201ENST00000364019 141 ntBASIC1.28□□□□□ -2.2
CLOCKO15516 RNU6-1026P-201ENST00000384465 108 ntBASIC1.28□□□□□ -2.2
CLOCKO15516 SNORA26.8-201ENST00000391306 124 ntBASIC1.28□□□□□ -2.2
CLOCKO15516 AP000275.1-201ENST00000411943 390 ntBASIC1.28□□□□□ -2.2
CLOCKO15516 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.28□□□□□ -2.2
CLOCKO15516 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.28□□□□□ -2.2
CLOCKO15516 AC015922.2-201ENST00000435593 184 ntBASIC1.28□□□□□ -2.2
CLOCKO15516 AL121601.2-201ENST00000438019 707 ntBASIC1.28□□□□□ -2.2
CLOCKO15516 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.28□□□□□ -2.2
CLOCKO15516 RNU7-167P-201ENST00000459160 62 ntBASIC1.28□□□□□ -2.2
CLOCKO15516 AC099513.1-201ENST00000490423 301 ntBASIC1.28□□□□□ -2.2
CLOCKO15516 RPS23P5-201ENST00000495419 428 ntBASIC1.28□□□□□ -2.2
CLOCKO15516 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.28□□□□□ -2.2
CLOCKO15516 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.28□□□□□ -2.2
CLOCKO15516 AC079140.3-201ENST00000511111 550 ntBASIC1.28□□□□□ -2.2
CLOCKO15516 AL137161.1-201ENST00000532231 390 ntBASIC1.28□□□□□ -2.2
CLOCKO15516 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.28□□□□□ -2.2
CLOCKO15516 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.28□□□□□ -2.2
CLOCKO15516 AC068338.1-201ENST00000565567 176 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms