Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 RNU1-148P-201ENST00000384472 162 ntBASIC2.24□□□□□ -2.05
TO15178 RNU6-601P-201ENST00000384540 107 ntBASIC2.24□□□□□ -2.05
TO15178 SNORA67.4-201ENST00000384688 142 ntBASIC2.24□□□□□ -2.05
TO15178 RNU6-1009P-201ENST00000390996 107 ntBASIC2.24□□□□□ -2.05
TO15178 Y_RNA.597-201ENST00000410463 100 ntBASIC2.24□□□□□ -2.05
TO15178 RNA5SP494-201ENST00000410653 129 ntBASIC2.24□□□□□ -2.05
TO15178 CBX3P6-201ENST00000430257 527 ntBASIC2.24□□□□□ -2.05
TO15178 IPO7P1-201ENST00000442031 636 ntBASIC2.24□□□□□ -2.05
TO15178 AL513328.1-201ENST00000446460 224 ntBASIC2.24□□□□□ -2.05
TO15178 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.24□□□□□ -2.05
TO15178 AL353705.4-201ENST00000449661 238 ntBASIC2.24□□□□□ -2.05
TO15178 Y_RNA.635-201ENST00000459041 101 ntBASIC2.24□□□□□ -2.05
TO15178 AC021146.2-201ENST00000504736 556 ntBASIC2.24□□□□□ -2.05
TO15178 RNU6-875P-201ENST00000516488 106 ntBASIC2.24□□□□□ -2.05
TO15178 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.24□□□□□ -2.05
TO15178 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.24□□□□□ -2.05
TO15178 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.24□□□□□ -2.05
TO15178 MIR3126-201ENST00000577443 74 ntBASIC2.24□□□□□ -2.05
TO15178 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.24□□□□□ -2.05
TO15178 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.24□□□□□ -2.05
TO15178 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.24□□□□□ -2.05
TO15178 AC018462.2-201ENST00000605375 395 ntBASIC2.24□□□□□ -2.05
TO15178 AC103810.6-201ENST00000606708 136 ntBASIC2.24□□□□□ -2.05
TO15178 AC067747.1-201ENST00000608026 250 ntBASIC2.24□□□□□ -2.05
TO15178 AC009318.2-201ENST00000610917 651 ntBASIC2.24□□□□□ -2.05
TO15178 MIR6840-201ENST00000611937 71 ntBASIC2.24□□□□□ -2.05
TO15178 AC137590.2-201ENST00000619709 240 ntBASIC2.24□□□□□ -2.05
TO15178 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.24□□□□□ -2.05
TO15178 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TO15178 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.23□□□□□ -2.05
TO15178 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
TO15178 AL596028.1-201ENST00000326971 197 ntBASIC2.23□□□□□ -2.05
TO15178 RNU5B-2P-201ENST00000363036 113 ntBASIC2.23□□□□□ -2.05
TO15178 RNA5SP201-201ENST00000410316 124 ntBASIC2.23□□□□□ -2.05
TO15178 RNU6-174P-201ENST00000410406 106 ntBASIC2.23□□□□□ -2.05
TO15178 AC009963.1-201ENST00000417265 157 ntBASIC2.23□□□□□ -2.05
TO15178 AC009238.1-201ENST00000442165 424 ntBASIC2.23□□□□□ -2.05
TO15178 AC093019.1-201ENST00000443135 252 ntBASIC2.23□□□□□ -2.05
TO15178 AC009237.6-201ENST00000446969 424 ntBASIC2.23□□□□□ -2.05
TO15178 AC079354.2-201ENST00000453523 154 ntBASIC2.23□□□□□ -2.05
TO15178 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.23□□□□□ -2.05
TO15178 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.23□□□□□ -2.05
TO15178 AC026782.1-201ENST00000512952 449 ntBASIC2.23□□□□□ -2.05
TO15178 AC105029.1-201ENST00000520250 669 ntBASIC2.23□□□□□ -2.05
TO15178 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.23□□□□□ -2.05
TO15178 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.23□□□□□ -2.05
TO15178 AC018630.3-201ENST00000542637 96 ntBASIC2.23□□□□□ -2.05
TO15178 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.23□□□□□ -2.05
TO15178 AC109446.1-201ENST00000566172 220 ntBASIC2.23□□□□□ -2.05
TO15178 AC007229.1-201ENST00000590455 412 ntBASIC2.23□□□□□ -2.05
TO15178 PCGEM1.1-201ENST00000613431 131 ntBASIC2.23□□□□□ -2.05
TO15178 AC005520.5-201ENST00000613926 164 ntBASIC2.23□□□□□ -2.05
TO15178 AC104260.1-201ENST00000616660 539 ntBASIC2.23□□□□□ -2.05
TO15178 AL008636.1-201ENST00000625038 1018 ntBASIC2.23□□□□□ -2.05
TO15178 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
TO15178 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.23□□□□□ -2.05
TO15178 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
TO15178 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TO15178 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
TO15178 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.22□□□□□ -2.05
TO15178 RNU6-1159P-201ENST00000362933 107 ntBASIC2.22□□□□□ -2.05
TO15178 RNU1-23P-201ENST00000363361 144 ntBASIC2.22□□□□□ -2.05
TO15178 U3.9-201ENST00000363823 204 ntBASIC2.22□□□□□ -2.05
TO15178 RNU6-944P-201ENST00000364023 107 ntBASIC2.22□□□□□ -2.05
TO15178 RNU6-546P-201ENST00000383991 107 ntBASIC2.22□□□□□ -2.05
TO15178 SNORA46.1-201ENST00000391069 153 ntBASIC2.22□□□□□ -2.05
TO15178 MIR208B-201ENST00000401172 77 ntBASIC2.22□□□□□ -2.05
TO15178 RNU6-1050P-201ENST00000410388 107 ntBASIC2.22□□□□□ -2.05
TO15178 RNU2-32P-201ENST00000411193 191 ntBASIC2.22□□□□□ -2.05
TO15178 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.22□□□□□ -2.05
TO15178 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.22□□□□□ -2.05
TO15178 SNORA59A-201ENST00000459326 152 ntBASIC2.22□□□□□ -2.05
TO15178 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.22□□□□□ -2.05
TO15178 AC005741.1-201ENST00000511094 432 ntBASIC2.22□□□□□ -2.05
TO15178 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.22□□□□□ -2.05
TO15178 RNA5SP24-201ENST00000516478 95 ntBASIC2.22□□□□□ -2.05
TO15178 Y_RNA.708-201ENST00000516950 96 ntBASIC2.22□□□□□ -2.05
TO15178 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.22□□□□□ -2.05
TO15178 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.22□□□□□ -2.05
TO15178 AC078899.2-201ENST00000595282 212 ntBASIC2.22□□□□□ -2.05
TO15178 AC011494.1-201ENST00000596454 237 ntBASIC2.22□□□□□ -2.05
TO15178 7SK.7-201ENST00000603504 247 ntBASIC2.22□□□□□ -2.05
TO15178 PISRT1.1-201ENST00000616930 107 ntBASIC2.22□□□□□ -2.05
TO15178 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.22□□□□□ -2.05
TO15178 MIR6852-201ENST00000621699 66 ntBASIC2.22□□□□□ -2.05
TO15178 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
TO15178 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TO15178 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TO15178 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
TO15178 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
TO15178 RNU4-9P-201ENST00000364951 139 ntBASIC2.21□□□□□ -2.06
TO15178 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
TO15178 MIR1294-201ENST00000408503 142 ntBASIC2.21□□□□□ -2.06
TO15178 Y_RNA.594-201ENST00000410373 140 ntBASIC2.21□□□□□ -2.06
TO15178 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.21□□□□□ -2.06
TO15178 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.21□□□□□ -2.06
TO15178 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.21□□□□□ -2.06
TO15178 FO393415.2-201ENST00000480085 343 ntBASIC2.21□□□□□ -2.06
TO15178 RPL23AP75-201ENST00000491601 451 ntBASIC2.21□□□□□ -2.06
TO15178 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms