Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.25□□□□□ -2.21
LSM1O15116 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
LSM1O15116 SNORA36A-201ENST00000384221 132 ntBASIC1.25□□□□□ -2.21
LSM1O15116 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.25□□□□□ -2.21
LSM1O15116 ARL5AP1-201ENST00000418991 388 ntBASIC1.25□□□□□ -2.21
LSM1O15116 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.25□□□□□ -2.21
LSM1O15116 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.25□□□□□ -2.21
LSM1O15116 SCARNA18-201ENST00000459004 134 ntBASIC1.25□□□□□ -2.21
LSM1O15116 RPL30P7-201ENST00000479312 323 ntBASIC1.25□□□□□ -2.21
LSM1O15116 RNU6-567P-201ENST00000516746 107 ntBASIC1.25□□□□□ -2.21
LSM1O15116 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.25□□□□□ -2.21
LSM1O15116 AC084364.2-201ENST00000546924 395 ntBASIC1.25□□□□□ -2.21
LSM1O15116 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.25□□□□□ -2.21
LSM1O15116 RSL24D1P11-201ENST00000591045 491 ntBASIC1.25□□□□□ -2.21
LSM1O15116 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.25□□□□□ -2.21
LSM1O15116 AC064807.4-201ENST00000607201 407 ntBASIC1.25□□□□□ -2.21
LSM1O15116 AC083806.3-201ENST00000614016 455 ntBASIC1.25□□□□□ -2.21
LSM1O15116 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.25□□□□□ -2.21
LSM1O15116 AF246928.1-201ENST00000623768 87 ntBASIC1.25□□□□□ -2.21
LSM1O15116 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
LSM1O15116 ZNF209P-201ENST00000593450 2304 ntBASIC1.24□□□□□ -2.21
LSM1O15116 AC100821.1-201ENST00000523153 2479 ntBASIC1.24□□□□□ -2.21
LSM1O15116 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.24□□□□□ -2.21
LSM1O15116 RNU1-17P-201ENST00000363022 152 ntBASIC1.24□□□□□ -2.21
LSM1O15116 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.24□□□□□ -2.21
LSM1O15116 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.24□□□□□ -2.21
LSM1O15116 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.24□□□□□ -2.21
LSM1O15116 TOMM22P2-201ENST00000430735 237 ntBASIC1.24□□□□□ -2.21
LSM1O15116 AL031274.1-201ENST00000450334 232 ntBASIC1.24□□□□□ -2.21
LSM1O15116 AC022364.2-201ENST00000457963 554 ntBASIC1.24□□□□□ -2.21
LSM1O15116 snoU13.30-201ENST00000458951 104 ntBASIC1.24□□□□□ -2.21
LSM1O15116 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.24□□□□□ -2.21
LSM1O15116 AC004223.1-201ENST00000479840 271 ntBASIC1.24□□□□□ -2.21
LSM1O15116 RPL36AP21-201ENST00000490372 323 ntBASIC1.24□□□□□ -2.21
LSM1O15116 AK3P2-201ENST00000507976 429 ntBASIC1.24□□□□□ -2.21
LSM1O15116 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.24□□□□□ -2.21
LSM1O15116 RNU5F-4P-201ENST00000516581 114 ntBASIC1.24□□□□□ -2.21
LSM1O15116 RNA5SP481-201ENST00000516814 122 ntBASIC1.24□□□□□ -2.21
LSM1O15116 DEFB131C-201ENST00000528817 165 ntBASIC1.24□□□□□ -2.21
LSM1O15116 AC015712.3-201ENST00000559380 164 ntBASIC1.24□□□□□ -2.21
LSM1O15116 HMGB1P33-201ENST00000563485 527 ntBASIC1.24□□□□□ -2.21
LSM1O15116 MIR3915-201ENST00000578518 97 ntBASIC1.24□□□□□ -2.21
LSM1O15116 MIR3941-201ENST00000582572 103 ntBASIC1.24□□□□□ -2.21
LSM1O15116 Z84480.1-201ENST00000605131 311 ntBASIC1.24□□□□□ -2.21
LSM1O15116 AL078604.3-201ENST00000615580 211 ntBASIC1.24□□□□□ -2.21
LSM1O15116 AL136221.1-201ENST00000621449 509 ntBASIC1.24□□□□□ -2.21
LSM1O15116 AC009161.2-201ENST00000624626 138 ntBASIC1.24□□□□□ -2.21
LSM1O15116 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.24□□□□□ -2.21
LSM1O15116 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.24□□□□□ -2.21
LSM1O15116 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
LSM1O15116 SNORA25.8-201ENST00000364831 128 ntBASIC1.23□□□□□ -2.21
LSM1O15116 RNU2-29P-201ENST00000410423 189 ntBASIC1.23□□□□□ -2.21
LSM1O15116 EBAG9P1-201ENST00000418955 543 ntBASIC1.23□□□□□ -2.21
LSM1O15116 EIF1P1-201ENST00000421436 341 ntBASIC1.23□□□□□ -2.21
LSM1O15116 AC133104.1-201ENST00000429100 218 ntBASIC1.23□□□□□ -2.21
LSM1O15116 AC067942.3-201ENST00000512025 362 ntBASIC1.23□□□□□ -2.21
LSM1O15116 SNORA18.6-201ENST00000516792 115 ntBASIC1.23□□□□□ -2.21
LSM1O15116 RN7SKP219-201ENST00000516825 296 ntBASIC1.23□□□□□ -2.21
LSM1O15116 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
LSM1O15116 RAB11AP2-201ENST00000545905 639 ntBASIC1.23□□□□□ -2.21
LSM1O15116 AL161670.1-201ENST00000554348 137 ntBASIC1.23□□□□□ -2.21
LSM1O15116 MIR3976-201ENST00000606807 139 ntBASIC1.23□□□□□ -2.21
LSM1O15116 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.23□□□□□ -2.21
LSM1O15116 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
LSM1O15116 FGF7P2-201ENST00000332473 296 ntBASIC1.22□□□□□ -2.21
LSM1O15116 SNORD33-201ENST00000362761 85 ntBASIC1.22□□□□□ -2.21
LSM1O15116 RNU6-181P-201ENST00000363225 107 ntBASIC1.22□□□□□ -2.21
LSM1O15116 Y_RNA.504-201ENST00000384481 104 ntBASIC1.22□□□□□ -2.21
LSM1O15116 MIR618-201ENST00000385287 98 ntBASIC1.22□□□□□ -2.21
LSM1O15116 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.22□□□□□ -2.21
LSM1O15116 PIGFP2-201ENST00000421400 651 ntBASIC1.22□□□□□ -2.21
LSM1O15116 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.22□□□□□ -2.21
LSM1O15116 RNA5SP269-201ENST00000459032 137 ntBASIC1.22□□□□□ -2.21
LSM1O15116 RNU7-167P-201ENST00000459160 62 ntBASIC1.22□□□□□ -2.21
LSM1O15116 AC079140.2-201ENST00000506193 142 ntBASIC1.22□□□□□ -2.21
LSM1O15116 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.22□□□□□ -2.21
LSM1O15116 RNU6-415P-201ENST00000516252 97 ntBASIC1.22□□□□□ -2.21
LSM1O15116 RNU6-445P-201ENST00000516949 107 ntBASIC1.22□□□□□ -2.21
LSM1O15116 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.22□□□□□ -2.21
LSM1O15116 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.22□□□□□ -2.21
LSM1O15116 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
LSM1O15116 AL512598.1-201ENST00000610158 273 ntBASIC1.22□□□□□ -2.21
LSM1O15116 AL353997.5-201ENST00000618886 171 ntBASIC1.22□□□□□ -2.21
LSM1O15116 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
LSM1O15116 RNU6-562P-201ENST00000362731 107 ntBASIC1.21□□□□□ -2.22
LSM1O15116 RNU1-96P-201ENST00000364163 162 ntBASIC1.21□□□□□ -2.22
LSM1O15116 RNU4-91P-201ENST00000364778 135 ntBASIC1.21□□□□□ -2.22
LSM1O15116 SNORA72.3-201ENST00000365074 132 ntBASIC1.21□□□□□ -2.22
LSM1O15116 SNORA40.6-201ENST00000391153 128 ntBASIC1.21□□□□□ -2.22
LSM1O15116 AC060773.1-201ENST00000421698 310 ntBASIC1.21□□□□□ -2.22
LSM1O15116 AC012306.1-201ENST00000423267 114 ntBASIC1.21□□□□□ -2.22
LSM1O15116 AL365203.2-201ENST00000423444 196 ntBASIC1.21□□□□□ -2.22
LSM1O15116 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.21□□□□□ -2.22
LSM1O15116 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.21□□□□□ -2.22
LSM1O15116 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.21□□□□□ -2.22
LSM1O15116 RPS23P5-201ENST00000495419 428 ntBASIC1.21□□□□□ -2.22
LSM1O15116 AC060788.1-201ENST00000521318 469 ntBASIC1.21□□□□□ -2.22
LSM1O15116 AC090821.2-201ENST00000523552 176 ntBASIC1.21□□□□□ -2.22
LSM1O15116 AP002963.1-201ENST00000530590 184 ntBASIC1.21□□□□□ -2.22
LSM1O15116 AL137161.1-201ENST00000532231 390 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms