Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RPL17P51-201ENST00000605218 238 ntBASIC1.05□□□□□ -2.24
UPK1AO00322 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.05□□□□□ -2.24
UPK1AO00322 AL359757.2-201ENST00000624309 274 ntBASIC1.05□□□□□ -2.24
UPK1AO00322 AC068205.3-201ENST00000636385 468 ntBASIC1.05□□□□□ -2.24
UPK1AO00322 AC010615.1-201ENST00000594254 1764 ntBASIC1.04□□□□□ -2.24
UPK1AO00322 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
UPK1AO00322 MIR340-201ENST00000362125 95 ntBASIC1.04□□□□□ -2.24
UPK1AO00322 SNORD33-201ENST00000362761 85 ntBASIC1.04□□□□□ -2.24
UPK1AO00322 Y_RNA.255-201ENST00000364581 97 ntBASIC1.04□□□□□ -2.24
UPK1AO00322 RNU6-378P-201ENST00000384324 107 ntBASIC1.04□□□□□ -2.24
UPK1AO00322 SNORA12.2-201ENST00000391040 156 ntBASIC1.04□□□□□ -2.24
UPK1AO00322 SNORA26.3-201ENST00000391119 136 ntBASIC1.04□□□□□ -2.24
UPK1AO00322 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.04□□□□□ -2.24
UPK1AO00322 RPL23AP95-201ENST00000426806 265 ntBASIC1.04□□□□□ -2.24
UPK1AO00322 AL135790.2-201ENST00000437701 267 ntBASIC1.04□□□□□ -2.24
UPK1AO00322 snoU13.30-201ENST00000458951 104 ntBASIC1.04□□□□□ -2.24
UPK1AO00322 SCARNA18-201ENST00000459004 134 ntBASIC1.04□□□□□ -2.24
UPK1AO00322 RPS23P5-201ENST00000495419 428 ntBASIC1.04□□□□□ -2.24
UPK1AO00322 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.04□□□□□ -2.24
UPK1AO00322 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.04□□□□□ -2.24
UPK1AO00322 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.04□□□□□ -2.24
UPK1AO00322 AC079140.2-201ENST00000506193 142 ntBASIC1.04□□□□□ -2.24
UPK1AO00322 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.04□□□□□ -2.24
UPK1AO00322 AC079140.3-201ENST00000511111 550 ntBASIC1.04□□□□□ -2.24
UPK1AO00322 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.04□□□□□ -2.24
UPK1AO00322 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.04□□□□□ -2.24
UPK1AO00322 MIR3937-201ENST00000580135 106 ntBASIC1.04□□□□□ -2.24
UPK1AO00322 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.04□□□□□ -2.24
UPK1AO00322 Z98751.3-201ENST00000604447 521 ntBASIC1.04□□□□□ -2.24
UPK1AO00322 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.04□□□□□ -2.24
UPK1AO00322 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
UPK1AO00322 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
UPK1AO00322 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
UPK1AO00322 RNU6-862P-201ENST00000362804 105 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 RNU6-266P-201ENST00000364225 107 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 SNORD1A-201ENST00000364968 72 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 RNU6-1127P-201ENST00000384580 107 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 RNU6-1106P-201ENST00000390845 107 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 ARL5AP1-201ENST00000418991 388 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 CYCSP46-201ENST00000423569 204 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 Z82205.1-201ENST00000428456 297 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 AC016925.1-201ENST00000458303 298 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 GMFBP1-201ENST00000467831 427 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 AL163973.1-201ENST00000484753 577 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 AC099513.1-201ENST00000490423 301 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.03□□□□□ -2.24
UPK1AO00322 RNA5SP481-201ENST00000516814 122 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 SNORA25.17-201ENST00000517184 124 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.03□□□□□ -2.24
UPK1AO00322 MIR3941-201ENST00000582572 103 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.03□□□□□ -2.24
UPK1AO00322 AC064872.1-201ENST00000604823 1072 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 snoU13.31-201ENST00000607291 104 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 MIR6078-201ENST00000611069 100 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 AC136475.10-201ENST00000620253 385 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 AC007494.3-201ENST00000624660 743 ntBASIC1.03□□□□□ -2.24
UPK1AO00322 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.02□□□□□ -2.25
UPK1AO00322 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
UPK1AO00322 RNU6-1019P-201ENST00000364424 107 ntBASIC1.02□□□□□ -2.25
UPK1AO00322 RNU5A-2P-201ENST00000384337 116 ntBASIC1.02□□□□□ -2.25
UPK1AO00322 SNORA16.2-201ENST00000390991 127 ntBASIC1.02□□□□□ -2.25
UPK1AO00322 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
UPK1AO00322 MTCO1P21-201ENST00000416634 589 ntBASIC1.02□□□□□ -2.25
UPK1AO00322 BX295541.1-201ENST00000417774 250 ntBASIC1.02□□□□□ -2.25
UPK1AO00322 AC133104.1-201ENST00000429100 218 ntBASIC1.02□□□□□ -2.25
UPK1AO00322 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.02□□□□□ -2.25
UPK1AO00322 AL133217.1-201ENST00000450980 425 ntBASIC1.02□□□□□ -2.25
UPK1AO00322 AC008628.2-201ENST00000502605 298 ntBASIC1.02□□□□□ -2.25
UPK1AO00322 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.02□□□□□ -2.25
UPK1AO00322 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.02□□□□□ -2.25
UPK1AO00322 RNU6-237P-201ENST00000515985 71 ntBASIC1.02□□□□□ -2.25
UPK1AO00322 AC019176.1-201ENST00000518519 225 ntBASIC1.02□□□□□ -2.25
UPK1AO00322 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.02□□□□□ -2.25
UPK1AO00322 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
UPK1AO00322 AP001836.1-201ENST00000604675 523 ntBASIC1.02□□□□□ -2.25
UPK1AO00322 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
UPK1AO00322 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.02□□□□□ -2.25
UPK1AO00322 AL136221.1-201ENST00000621449 509 ntBASIC1.02□□□□□ -2.25
UPK1AO00322 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.02□□□□□ -2.25
UPK1AO00322 RNU1-96P-201ENST00000364163 162 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 RNU6-877P-201ENST00000383868 107 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 SNORD26-201ENST00000384147 75 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 FGF7P8-201ENST00000402994 292 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 AC013410.2-201ENST00000422627 201 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.01□□□□□ -2.25
UPK1AO00322 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.01□□□□□ -2.25
UPK1AO00322 C8orf59P1-201ENST00000429930 303 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.01□□□□□ -2.25
UPK1AO00322 MTCO3P29-201ENST00000432119 779 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 AC099677.2-201ENST00000436385 175 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 AC069257.2-201ENST00000441819 155 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 AL022238.1-201ENST00000442557 355 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.01□□□□□ -2.25
UPK1AO00322 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.01□□□□□ -2.25
UPK1AO00322 SNRPFP3-201ENST00000457792 225 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 SNORD42A-201ENST00000459584 64 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 AC010531.2-201ENST00000465012 153 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms