Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 SNORA70.4-201ENST00000365509 134 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 RNU6-418P-201ENST00000384035 107 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 MIR320A-201ENST00000385302 82 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SMKR1H3BMG3 RN7SKP223-201ENST00000410582 62 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.16□□□□□ -2.22
SMKR1H3BMG3 AL135786.1-201ENST00000415892 214 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 AC060773.1-201ENST00000421698 310 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 MTCO2P19-201ENST00000427513 598 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 MTCO3P29-201ENST00000432119 779 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 AC069257.2-201ENST00000441819 155 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.16□□□□□ -2.22
SMKR1H3BMG3 RPS29P23-201ENST00000458635 123 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 snoU13.6-201ENST00000458785 104 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 RPS29P27-201ENST00000463711 170 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 AC091435.1-201ENST00000505442 584 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 AC108078.1-201ENST00000508073 725 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 AC025465.4-201ENST00000513422 638 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 RNU2-34P-201ENST00000516534 121 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 AC087854.1-201ENST00000519706 414 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 AC027807.1-201ENST00000559921 996 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 AC121247.2-201ENST00000604776 136 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 MIR8081-201ENST00000611533 95 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 AL121890.5-201ENST00000620848 304 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
SMKR1H3BMG3 MTND4P23-201ENST00000447723 1363 ntBASIC1.16□□□□□ -2.22
SMKR1H3BMG3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.15□□□□□ -2.22
SMKR1H3BMG3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SMKR1H3BMG3 SNORD33-201ENST00000362761 85 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 RNU6-82P-201ENST00000363970 107 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 SNORA29-201ENST00000384183 140 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 MIR548B-201ENST00000385247 97 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 MIR1283-1-201ENST00000408494 87 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 RN7SKP192-201ENST00000411291 327 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.15□□□□□ -2.23
SMKR1H3BMG3 DPH3P2-201ENST00000422618 250 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 AC027119.1-201ENST00000440877 241 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.15□□□□□ -2.23
SMKR1H3BMG3 BET1P1-201ENST00000482276 359 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 AC079140.2-201ENST00000506193 142 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 AC011406.1-201ENST00000512440 370 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 RNU6-189P-201ENST00000516120 101 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 RNA5SP384-201ENST00000516615 116 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.15□□□□□ -2.23
SMKR1H3BMG3 DEFB131C-201ENST00000528817 165 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
SMKR1H3BMG3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.15□□□□□ -2.23
SMKR1H3BMG3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.15□□□□□ -2.23
SMKR1H3BMG3 MIR4753-201ENST00000585119 83 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.15□□□□□ -2.23
SMKR1H3BMG3 AC073648.5-201ENST00000603502 305 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 AC063944.3-201ENST00000609969 533 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 AL353149.1-201ENST00000610667 244 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 uc_338.5-201ENST00000611839 155 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 AC087241.4-201ENST00000612441 480 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 AL158063.1-201ENST00000615349 536 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 AC008147.4-201ENST00000617570 1204 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 AC005562.2-201ENST00000618264 111 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.15□□□□□ -2.23
SMKR1H3BMG3 AC084768.2-201ENST00000622736 221 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 AL359697.1-201ENST00000624879 587 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 AC095038.3-201ENST00000634439 195 ntBASIC1.15□□□□□ -2.23
SMKR1H3BMG3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.15□□□□□ -2.23
SMKR1H3BMG3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
SMKR1H3BMG3 SNORD26-201ENST00000384147 75 ntBASIC1.14□□□□□ -2.23
SMKR1H3BMG3 SNORA75-201ENST00000384158 137 ntBASIC1.14□□□□□ -2.23
SMKR1H3BMG3 RN7SKP51-201ENST00000410781 304 ntBASIC1.14□□□□□ -2.23
SMKR1H3BMG3 Z92545.1-201ENST00000411782 234 ntBASIC1.14□□□□□ -2.23
SMKR1H3BMG3 RPL30P13-201ENST00000418873 348 ntBASIC1.14□□□□□ -2.23
SMKR1H3BMG3 CST2P1-201ENST00000425770 87 ntBASIC1.14□□□□□ -2.23
SMKR1H3BMG3 AL139415.2-201ENST00000431968 163 ntBASIC1.14□□□□□ -2.23
SMKR1H3BMG3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.14□□□□□ -2.23
SMKR1H3BMG3 TPTE2P5-203ENST00000458118 728 ntBASIC1.14□□□□□ -2.23
SMKR1H3BMG3 MTCO3P38-201ENST00000468910 766 ntBASIC1.14□□□□□ -2.23
SMKR1H3BMG3 FO393415.2-201ENST00000480085 343 ntBASIC1.14□□□□□ -2.23
SMKR1H3BMG3 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.14□□□□□ -2.23
SMKR1H3BMG3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.14□□□□□ -2.23
SMKR1H3BMG3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SMKR1H3BMG3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.14□□□□□ -2.23
SMKR1H3BMG3 AC026470.2-201ENST00000561492 181 ntBASIC1.14□□□□□ -2.23
SMKR1H3BMG3 SUB1P3-201ENST00000564581 315 ntBASIC1.14□□□□□ -2.23
SMKR1H3BMG3 AC064836.2-201ENST00000609491 462 ntBASIC1.14□□□□□ -2.23
SMKR1H3BMG3 AC007684.1-201ENST00000609671 477 ntBASIC1.14□□□□□ -2.23
SMKR1H3BMG3 AC126177.8-201ENST00000618339 1015 ntBASIC1.14□□□□□ -2.23
SMKR1H3BMG3 AC103705.1-201ENST00000619013 241 ntBASIC1.14□□□□□ -2.23
SMKR1H3BMG3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.14□□□□□ -2.23
SMKR1H3BMG3 BX322639.1-202ENST00000423987 2213 ntBASIC1.13□□□□□ -2.23
SMKR1H3BMG3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.13□□□□□ -2.23
SMKR1H3BMG3 RNU5B-2P-201ENST00000363036 113 ntBASIC1.13□□□□□ -2.23
SMKR1H3BMG3 SNORA40.18-201ENST00000391200 128 ntBASIC1.13□□□□□ -2.23
SMKR1H3BMG3 MIR1304-201ENST00000408243 91 ntBASIC1.13□□□□□ -2.23
SMKR1H3BMG3 RPS26P42-201ENST00000413485 326 ntBASIC1.13□□□□□ -2.23
SMKR1H3BMG3 AL161935.2-201ENST00000414627 60 ntBASIC1.13□□□□□ -2.23
SMKR1H3BMG3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.13□□□□□ -2.23
SMKR1H3BMG3 AL353193.1-201ENST00000421444 268 ntBASIC1.13□□□□□ -2.23
SMKR1H3BMG3 MTND3P9-201ENST00000429526 346 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms