Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 RAP1BP2-201ENST00000478270 544 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AP001025.1-201ENST00000486139 332 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC091133.4-201ENST00000511142 308 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC091965.2-201ENST00000512324 613 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 SNORA4.4-201ENST00000515921 135 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 SNORA48.11-201ENST00000517015 89 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC006362.1-201ENST00000567392 174 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC026271.5-201ENST00000577873 130 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC005261.5-201ENST00000596280 355 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 CLIC4P2-201ENST00000601934 717 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC073410.2-201ENST00000603240 332 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 Z94722.1-201ENST00000604328 474 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC087752.4-201ENST00000605911 462 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC092354.1-201ENST00000606057 376 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 MIR2909-201ENST00000617113 69 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 MIR3974-201ENST00000637126 96 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 AL442644.1-201ENST00000454390 3105 ntBASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 RNU4-48P-201ENST00000365559 182 ntBASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 RNU6-434P-201ENST00000384376 107 ntBASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 RNU6-658P-201ENST00000384606 106 ntBASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 BTF3L4P2-201ENST00000392798 346 ntBASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 AC068050.1-201ENST00000394891 380 ntBASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 MIR934-201ENST00000401241 83 ntBASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 AL357139.1-201ENST00000407792 426 ntBASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 UBE2V1P10-201ENST00000414685 269 ntBASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 AC092001.1-201ENST00000453012 261 ntBASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 MTCO2P6-201ENST00000463134 685 ntBASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 AF186996.7-201ENST00000492781 209 ntBASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 AC069113.1-201ENST00000517763 267 ntBASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 MIR3126-201ENST00000577443 74 ntBASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 AC004223.2-201ENST00000590309 544 ntBASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 AL078605.1-201ENST00000603529 500 ntBASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 AC012507.3-201ENST00000603556 477 ntBASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 AC091304.9-201ENST00000612091 226 ntBASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 AC124864.2-201ENST00000624736 186 ntBASIC0.74□□□□□ -2.29
COL6A6A6NMZ7 SNORD56.1-201ENST00000362913 68 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 SNORD113-6-201ENST00000363345 75 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 RNU6-660P-201ENST00000364566 109 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 Y_RNA.280-201ENST00000364765 112 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 SNORD32A-201ENST00000364805 84 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 SNORA72.2-201ENST00000365028 127 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 SNORA20.2-201ENST00000383922 131 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 CBX3P9-201ENST00000402326 552 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 RNU2-9P-201ENST00000410194 145 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 RNU2-48P-201ENST00000410694 191 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 RNU2-41P-201ENST00000410991 178 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AC073464.1-201ENST00000429823 534 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AC130509.1-201ENST00000464158 433 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AL163973.1-201ENST00000484753 577 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 RPL30P1-201ENST00000488676 339 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 MTCYBP33-201ENST00000575007 1130 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AC136475.10-201ENST00000620253 385 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AC005609.4-201ENST00000625071 447 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AL157786.1-207ENST00000627771 695 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 RNY4P16-201ENST00000364768 94 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 RNU6-456P-201ENST00000384493 107 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 MIR186-201ENST00000384988 86 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 SNORD70.1-201ENST00000391007 85 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AL591034.2-201ENST00000402839 359 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AC133104.1-201ENST00000429100 218 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 HMGB1P35-201ENST00000503360 598 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AC021146.2-201ENST00000504736 556 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 SCARNA24.1-201ENST00000516465 137 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AC018630.3-201ENST00000542637 96 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 PIGPP4-201ENST00000584447 307 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AC119751.7-201ENST00000600494 245 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 CYP2C61P-201ENST00000604072 290 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AC004492.1-201ENST00000607036 742 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AC104458.1-201ENST00000608243 463 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 AC017083.3-201ENST00000609955 700 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 TCL6_2.1-201ENST00000615162 119 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.73□□□□□ -2.29
COL6A6A6NMZ7 RNA5SP347-201ENST00000362445 119 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 RNU6-1317P-201ENST00000364582 104 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 RNU6-546P-201ENST00000383991 107 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 Y_RNA.481-201ENST00000384373 102 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 RNU6-541P-201ENST00000384709 110 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 RNA5SP193-201ENST00000410353 107 ntBASIC0.72□□□□□ -2.29
COL6A6A6NMZ7 MTND3P21-201ENST00000433774 331 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms