Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 RNU4-84P-201ENST00000364200 139 ntBASIC-1.06□□□□□ -2.58
LINC01549A6NIU2 SNORA4.3-201ENST00000365564 137 ntBASIC-1.06□□□□□ -2.58
LINC01549A6NIU2 MIR489-201ENST00000384923 84 ntBASIC-1.06□□□□□ -2.58
LINC01549A6NIU2 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-1.06□□□□□ -2.58
LINC01549A6NIU2 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-1.06□□□□□ -2.58
LINC01549A6NIU2 MTCO3P28-201ENST00000513351 515 ntBASIC-1.06□□□□□ -2.58
LINC01549A6NIU2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC-1.06□□□□□ -2.58
LINC01549A6NIU2 BNIP3P30-201ENST00000601184 574 ntBASIC-1.06□□□□□ -2.58
LINC01549A6NIU2 AC025449.1-201ENST00000603896 529 ntBASIC-1.06□□□□□ -2.58
LINC01549A6NIU2 AC004832.4-201ENST00000608952 331 ntBASIC-1.06□□□□□ -2.58
LINC01549A6NIU2 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-1.07□□□□□ -2.58
LINC01549A6NIU2 Y_RNA.112-201ENST00000363250 102 ntBASIC-1.07□□□□□ -2.58
LINC01549A6NIU2 RNU6-188P-201ENST00000364207 107 ntBASIC-1.07□□□□□ -2.58
LINC01549A6NIU2 Y_RNA.256-201ENST00000364594 104 ntBASIC-1.07□□□□□ -2.58
LINC01549A6NIU2 RNA5SP109-201ENST00000391010 116 ntBASIC-1.07□□□□□ -2.58
LINC01549A6NIU2 SNORD111-201ENST00000408139 94 ntBASIC-1.07□□□□□ -2.58
LINC01549A6NIU2 RNU6-57P-201ENST00000411348 103 ntBASIC-1.07□□□□□ -2.58
LINC01549A6NIU2 TPT1P7-201ENST00000458300 517 ntBASIC-1.07□□□□□ -2.58
LINC01549A6NIU2 AP001180.6-201ENST00000584918 159 ntBASIC-1.07□□□□□ -2.58
LINC01549A6NIU2 VN1R88P-201ENST00000596787 292 ntBASIC-1.07□□□□□ -2.58
LINC01549A6NIU2 AC011451.2-201ENST00000604303 598 ntBASIC-1.07□□□□□ -2.58
LINC01549A6NIU2 AL513423.1-201ENST00000621695 132 ntBASIC-1.07□□□□□ -2.58
LINC01549A6NIU2 MIR454-201ENST00000390180 115 ntBASIC-1.08□□□□□ -2.58
LINC01549A6NIU2 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-1.08□□□□□ -2.58
LINC01549A6NIU2 MTCO3P41-201ENST00000414801 328 ntBASIC-1.08□□□□□ -2.58
LINC01549A6NIU2 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-1.08□□□□□ -2.58
LINC01549A6NIU2 STAG3L5P-204ENST00000443759 179 ntBASIC-1.08□□□□□ -2.58
LINC01549A6NIU2 AC012308.1-201ENST00000451232 178 ntBASIC-1.08□□□□□ -2.58
LINC01549A6NIU2 MTND2P7-201ENST00000521337 640 ntBASIC-1.08□□□□□ -2.58
LINC01549A6NIU2 AC010376.1-201ENST00000522101 334 ntBASIC-1.08□□□□□ -2.58
LINC01549A6NIU2 RBM11P1-201ENST00000604951 799 ntBASIC-1.08□□□□□ -2.58
LINC01549A6NIU2 AL390208.1-201ENST00000605885 644 ntBASIC-1.08□□□□□ -2.58
LINC01549A6NIU2 AC007014.2-201ENST00000615581 479 ntBASIC-1.08□□□□□ -2.58
LINC01549A6NIU2 AC008147.4-201ENST00000617570 1204 ntBASIC-1.08□□□□□ -2.58
LINC01549A6NIU2 MIR6759-201ENST00000638110 65 ntBASIC-1.08□□□□□ -2.58
LINC01549A6NIU2 MIR1-1-201ENST00000362147 71 ntBASIC-1.09□□□□□ -2.58
LINC01549A6NIU2 RNU6-622P-201ENST00000384272 103 ntBASIC-1.09□□□□□ -2.58
LINC01549A6NIU2 SNORD75.1-201ENST00000408373 60 ntBASIC-1.09□□□□□ -2.58
LINC01549A6NIU2 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-1.09□□□□□ -2.58
LINC01549A6NIU2 MRPS36P1-201ENST00000421291 307 ntBASIC-1.09□□□□□ -2.58
LINC01549A6NIU2 AC005345.1-201ENST00000431868 217 ntBASIC-1.09□□□□□ -2.58
LINC01549A6NIU2 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-1.09□□□□□ -2.58
LINC01549A6NIU2 BCRP9-201ENST00000605312 388 ntBASIC-1.09□□□□□ -2.58
LINC01549A6NIU2 MIR6755-201ENST00000619993 66 ntBASIC-1.09□□□□□ -2.58
LINC01549A6NIU2 AL603839.4-201ENST00000624658 1005 ntBASIC-1.09□□□□□ -2.58
LINC01549A6NIU2 SCARNA4-202ENST00000625402 129 ntBASIC-1.09□□□□□ -2.58
LINC01549A6NIU2 MIR101-1-201ENST00000362265 75 ntBASIC-1.1□□□□□ -2.59
LINC01549A6NIU2 Y_RNA.412-201ENST00000384001 104 ntBASIC-1.1□□□□□ -2.59
LINC01549A6NIU2 EIF4E2P1-201ENST00000393781 255 ntBASIC-1.1□□□□□ -2.59
LINC01549A6NIU2 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-1.1□□□□□ -2.59
LINC01549A6NIU2 AC093019.1-201ENST00000443135 252 ntBASIC-1.1□□□□□ -2.59
LINC01549A6NIU2 LINC01399-202ENST00000458450 244 ntBASIC-1.1□□□□□ -2.59
LINC01549A6NIU2 NDUFA4P2-201ENST00000489989 244 ntBASIC-1.1□□□□□ -2.59
LINC01549A6NIU2 AC121161.1-201ENST00000510606 652 ntBASIC-1.1□□□□□ -2.59
LINC01549A6NIU2 RNA5SP285-201ENST00000516619 119 ntBASIC-1.1□□□□□ -2.59
LINC01549A6NIU2 AC036111.3-201ENST00000526389 112 ntBASIC-1.1□□□□□ -2.59
LINC01549A6NIU2 AC234772.3-201ENST00000602277 528 ntBASIC-1.1□□□□□ -2.59
LINC01549A6NIU2 AC146944.4-201ENST00000602697 718 ntBASIC-1.1□□□□□ -2.59
LINC01549A6NIU2 AL096861.1-201ENST00000610899 123 ntBASIC-1.1□□□□□ -2.59
LINC01549A6NIU2 MIR412-201ENST00000362142 91 ntBASIC-1.11□□□□□ -2.59
LINC01549A6NIU2 RNU6-858P-201ENST00000362436 107 ntBASIC-1.11□□□□□ -2.59
LINC01549A6NIU2 RNU6-212P-201ENST00000362642 104 ntBASIC-1.11□□□□□ -2.59
LINC01549A6NIU2 RNU6-199P-201ENST00000362954 107 ntBASIC-1.11□□□□□ -2.59
LINC01549A6NIU2 RNU6-674P-201ENST00000363831 107 ntBASIC-1.11□□□□□ -2.59
LINC01549A6NIU2 RNU6-115P-201ENST00000364310 107 ntBASIC-1.11□□□□□ -2.59
LINC01549A6NIU2 Y_RNA.238-201ENST00000364441 102 ntBASIC-1.11□□□□□ -2.59
LINC01549A6NIU2 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-1.11□□□□□ -2.59
LINC01549A6NIU2 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-1.11□□□□□ -2.59
LINC01549A6NIU2 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-1.11□□□□□ -2.59
LINC01549A6NIU2 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
LINC01549A6NIU2 MIR449C-201ENST00000516047 92 ntBASIC-1.11□□□□□ -2.59
LINC01549A6NIU2 RNU6-491P-201ENST00000516099 110 ntBASIC-1.11□□□□□ -2.59
LINC01549A6NIU2 RNU6-782P-201ENST00000516852 104 ntBASIC-1.11□□□□□ -2.59
LINC01549A6NIU2 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC-1.11□□□□□ -2.59
LINC01549A6NIU2 AC026371.1-201ENST00000551867 419 ntBASIC-1.11□□□□□ -2.59
LINC01549A6NIU2 MIR548AO-201ENST00000579992 96 ntBASIC-1.11□□□□□ -2.59
LINC01549A6NIU2 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-1.11□□□□□ -2.59
LINC01549A6NIU2 MTND3P19-201ENST00000603825 345 ntBASIC-1.11□□□□□ -2.59
LINC01549A6NIU2 TTK-211ENST00000627129 240 ntTSL 5 BASIC-1.11□□□□□ -2.59
LINC01549A6NIU2 SNORD115-24-201ENST00000363528 82 ntBASIC-1.12□□□□□ -2.59
LINC01549A6NIU2 SNORD32B-201ENST00000364460 84 ntBASIC-1.12□□□□□ -2.59
LINC01549A6NIU2 SMIM11P1-201ENST00000369586 178 ntBASIC-1.12□□□□□ -2.59
LINC01549A6NIU2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-1.12□□□□□ -2.59
LINC01549A6NIU2 MTCO3P43-201ENST00000440974 771 ntBASIC-1.12□□□□□ -2.59
LINC01549A6NIU2 MTND1P17-201ENST00000448961 204 ntBASIC-1.12□□□□□ -2.59
LINC01549A6NIU2 PAXBP1P1-201ENST00000449315 447 ntBASIC-1.12□□□□□ -2.59
LINC01549A6NIU2 RPS29P15-201ENST00000458329 171 ntBASIC-1.12□□□□□ -2.59
LINC01549A6NIU2 RNU6-1041P-201ENST00000516254 102 ntBASIC-1.12□□□□□ -2.59
LINC01549A6NIU2 AC104695.3-201ENST00000604052 296 ntBASIC-1.12□□□□□ -2.59
LINC01549A6NIU2 RN7SL660P-201ENST00000614852 299 ntBASIC-1.12□□□□□ -2.59
LINC01549A6NIU2 AL356094.1-201ENST00000624663 1212 ntBASIC-1.12□□□□□ -2.59
LINC01549A6NIU2 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
LINC01549A6NIU2 Y_RNA.269-201ENST00000364685 89 ntBASIC-1.13□□□□□ -2.59
LINC01549A6NIU2 Y_RNA.355-201ENST00000365462 98 ntBASIC-1.13□□□□□ -2.59
LINC01549A6NIU2 MRPS10P2-201ENST00000431226 381 ntBASIC-1.13□□□□□ -2.59
LINC01549A6NIU2 GXYLT1P1-201ENST00000446657 490 ntBASIC-1.13□□□□□ -2.59
LINC01549A6NIU2 AL133217.1-201ENST00000450980 425 ntBASIC-1.13□□□□□ -2.59
LINC01549A6NIU2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-1.13□□□□□ -2.59
LINC01549A6NIU2 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-1.13□□□□□ -2.59
LINC01549A6NIU2 RNU6-917P-201ENST00000516294 104 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms