Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 SNORA26.7-201ENST00000391288 122 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 MIR887-201ENST00000401258 79 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 RNA5SP201-201ENST00000410316 124 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 RPS15AP7-201ENST00000439294 405 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 AL353752.1-201ENST00000454946 260 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 SNORA25.10-201ENST00000515926 124 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 RNU6-475P-201ENST00000516073 104 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 Y_RNA.706-201ENST00000516933 99 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 RPL30P11-203ENST00000598995 310 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 AC092447.9-201ENST00000603395 144 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 AL355802.3-201ENST00000607571 545 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 MIR1244-1-201ENST00000612829 85 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 AC083806.3-201ENST00000614016 455 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 AC138305.3-201ENST00000624988 240 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 MIR1244-3-201ENST00000635744 85 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 MIR1244-2-201ENST00000636449 85 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 MIR1244-4-202ENST00000636813 85 ntBASIC2.59□□□□□ -1.99
TCRBV7S3A2A0A539 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.59□□□□□ -2
TCRBV7S3A2A0A539 AC026241.1-201ENST00000517873 2142 ntBASIC2.59□□□□□ -2
TCRBV7S3A2A0A539 AC080128.1-201ENST00000474389 1917 ntBASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 RNU6-1159P-201ENST00000362933 107 ntBASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 Y_RNA.314-201ENST00000365114 102 ntBASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 Y_RNA.364-201ENST00000365532 101 ntBASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 MIR32-201ENST00000384965 70 ntBASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 RNU2-52P-201ENST00000410680 190 ntBASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 AC092423.1-201ENST00000430165 186 ntBASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 SCARNA15.1-201ENST00000516384 125 ntBASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 RNU6-911P-201ENST00000516523 104 ntBASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 RNU4-77P-201ENST00000516692 156 ntBASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 AC144568.1-201ENST00000520139 137 ntBASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 GNAI2P1-201ENST00000541815 315 ntBASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 AC006157.1-201ENST00000611750 366 ntBASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 AC007485.1-201ENST00000616755 206 ntBASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 AC243829.7-201ENST00000633081 225 ntBASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
TCRBV7S3A2A0A539 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 Y_RNA.80-201ENST00000362996 102 ntBASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 RNA5SP387-201ENST00000364226 106 ntBASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 RNU4-42P-201ENST00000364738 142 ntBASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 SNORA70.4-201ENST00000365509 134 ntBASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 AL031121.1-201ENST00000406553 254 ntBASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 AC007215.1-201ENST00000464893 276 ntBASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 RNU6-1198P-201ENST00000516904 67 ntBASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 MIR5092-201ENST00000583139 88 ntBASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 MIR3616-201ENST00000584070 92 ntBASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 AC078899.3-201ENST00000599065 212 ntBASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 AC016925.2-201ENST00000605108 242 ntBASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 PCGEM1.1-201ENST00000613431 131 ntBASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 AL138825.1-201ENST00000618587 192 ntBASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 AC010297.1-201ENST00000623948 149 ntBASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 AL606534.2-204ENST00000635008 178 ntBASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 MIR4272-201ENST00000635924 64 ntBASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 AC009487.2-201ENST00000420969 6821 ntBASIC2.57□□□□□ -2
TCRBV7S3A2A0A539 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 Y_RNA.39-201ENST00000362620 98 ntBASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 RNU6-461P-201ENST00000364195 107 ntBASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 SNORA69.1-201ENST00000390904 137 ntBASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 Y_RNA.592-201ENST00000410274 109 ntBASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 AC107083.1-201ENST00000439643 279 ntBASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 CHEK2P4-201ENST00000450340 246 ntBASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 snoU13.6-201ENST00000458785 104 ntBASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 SNORD109B-201ENST00000458961 67 ntBASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 SNORD109A-201ENST00000459128 67 ntBASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 TOMM22P6-201ENST00000465035 409 ntBASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 ANXA2P1-201ENST00000505539 926 ntBASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 MIR2355-201ENST00000517199 87 ntBASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 SNORA70.24-201ENST00000517233 118 ntBASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 COX6CP5-201ENST00000527162 228 ntBASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 AC027288.2-201ENST00000553028 243 ntBASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 MIR3200-201ENST00000580767 85 ntBASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 AC105245.1-201ENST00000581934 244 ntBASIC2.56□□□□□ -2
TCRBV7S3A2A0A539 MIR3199-1-201ENST00000582434 88 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms