Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 RPL30P16-201ENST00000419341 429 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 AL513185.2-201ENST00000425543 193 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 RPS15AP10-201ENST00000432472 382 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 MTND3P21-201ENST00000433774 331 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 MTCO3P18-201ENST00000440206 761 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 NFU1P2-201ENST00000448700 469 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 MTND1P11-201ENST00000456661 876 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 snoU13.6-201ENST00000458785 104 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 HMGB1P35-201ENST00000503360 598 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 AC109479.2-201ENST00000517842 174 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 AC109329.1-201ENST00000518744 317 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 MRPS36P4-201ENST00000534436 298 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 HSPE1P4-201ENST00000550617 308 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 AC009127.3-201ENST00000570531 403 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 MIR3941-201ENST00000582572 103 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 AC023043.2-201ENST00000589678 1026 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 AC078795.3-201ENST00000602913 472 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 AC245884.12-201ENST00000615364 59 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 SNORD98-201ENST00000636377 67 ntBASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
TRAV40A0A0B4J280 Y_RNA.100-201ENST00000363141 102 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 Y_RNA.151-201ENST00000363566 112 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 SNORA38-201ENST00000363946 132 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 Y_RNA.453-201ENST00000384223 109 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 Y_RNA.504-201ENST00000384481 104 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 RNU6-831P-201ENST00000384548 107 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 EIF4E2P1-201ENST00000393781 255 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 RNU2-32P-201ENST00000411193 191 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 AL590135.1-201ENST00000422215 156 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 AC019205.3-201ENST00000424573 156 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 USP9YP18-201ENST00000425912 695 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 MTCO2P3-201ENST00000442543 421 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 AC016700.2-201ENST00000446011 156 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 PPP1R2P5-201ENST00000457256 603 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 AC015911.1-201ENST00000495111 156 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 TRBVA-201ENST00000498804 316 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 AC091885.1-201ENST00000506658 268 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 FAM206BP-201ENST00000510179 541 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 AC108729.3-201ENST00000513484 108 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 RNU2-44P-201ENST00000516795 194 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 RNU6-1088P-201ENST00000516850 104 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 RNU6-612P-201ENST00000516909 102 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 RNU6-667P-201ENST00000517186 102 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 AC069113.1-201ENST00000517763 267 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 AC107953.1-201ENST00000522216 297 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 CYCSP26-201ENST00000534107 320 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 AC024614.2-201ENST00000577584 372 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 BNIP3P16-201ENST00000589779 534 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 AC016727.1-205ENST00000605437 569 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 MIR3976-201ENST00000606807 139 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 AC007792.1-201ENST00000623023 402 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 AL133216.2-202ENST00000634512 349 ntBASIC1.37□□□□□ -2.19
TRAV40A0A0B4J280 AC121333.1-201ENST00000567488 2709 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 SNORD113-7-201ENST00000363762 77 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 RNU6-378P-201ENST00000384324 107 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 RNU6-95P-201ENST00000384697 107 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 MIR1262-201ENST00000408276 93 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 Y_RNA.595-201ENST00000410403 105 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 VN1R36P-201ENST00000414936 291 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 AL358453.1-201ENST00000422522 250 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 RPL23AP95-201ENST00000426806 265 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 AC244670.1-201ENST00000436879 112 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 AL359672.1-201ENST00000442302 409 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 AC006026.2-201ENST00000457376 180 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 RPL9P9-202ENST00000466501 579 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 AC145146.1-201ENST00000496370 254 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 PTP4A1P4-201ENST00000512479 322 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 AC025465.4-201ENST00000513422 638 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 SNORA48.11-201ENST00000517015 89 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 AC087854.1-201ENST00000519706 414 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 AC008749.1-201ENST00000597650 306 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 AC080078.2-201ENST00000603766 501 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 AL132822.1-201ENST00000617063 513 ntBASIC1.36□□□□□ -2.19
TRAV40A0A0B4J280 AL136221.1-201ENST00000621449 509 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms