Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SNORD116-12-201ENST00000384468 92 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 RNU6-692P-201ENST00000384496 107 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 RNA5SP109-201ENST00000391010 116 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 RPL21P1-201ENST00000399532 476 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 AL031577.2-201ENST00000404133 280 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 AC114491.1-201ENST00000416095 246 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 AC006366.1-201ENST00000422002 759 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 AC010154.1-201ENST00000425857 269 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 AC244023.1-201ENST00000426884 112 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 AL035398.1-201ENST00000430869 322 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 AL358794.1-201ENST00000445689 381 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 AP000797.1-201ENST00000478870 387 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 RPS26P48-201ENST00000491713 339 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 AC010587.2-201ENST00000511727 448 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 AC067942.3-201ENST00000512025 362 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 RNU6-1223P-201ENST00000517124 104 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 AC011979.2-201ENST00000527568 352 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 MIR3923-201ENST00000579521 83 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 AC242498.1-201ENST00000604134 111 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 AP002360.4-201ENST00000606980 481 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 PCGEM1.1-201ENST00000613431 131 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 AC243994.1-201ENST00000618627 109 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 AC009509.4-201ENST00000619202 509 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 AC243829.3-201ENST00000622177 108 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 AC106754.2-201ENST00000623006 233 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 RNU6-1141P-201ENST00000364520 107 ntBASIC0.29□□□□□ -2.36
TRAV27A0A087WT01 RNU6-378P-201ENST00000384324 107 ntBASIC0.29□□□□□ -2.36
TRAV27A0A087WT01 RNU6-505P-201ENST00000384427 107 ntBASIC0.29□□□□□ -2.36
TRAV27A0A087WT01 SNORA80D-201ENST00000384488 135 ntBASIC0.29□□□□□ -2.36
TRAV27A0A087WT01 RPS20P2-201ENST00000402520 389 ntBASIC0.29□□□□□ -2.36
TRAV27A0A087WT01 RNU6-293P-201ENST00000411259 106 ntBASIC0.29□□□□□ -2.36
TRAV27A0A087WT01 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.29□□□□□ -2.36
TRAV27A0A087WT01 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.29□□□□□ -2.36
TRAV27A0A087WT01 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.29□□□□□ -2.36
TRAV27A0A087WT01 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.29□□□□□ -2.36
TRAV27A0A087WT01 SNRPGP9-201ENST00000456025 225 ntBASIC0.29□□□□□ -2.36
TRAV27A0A087WT01 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.29□□□□□ -2.36
TRAV27A0A087WT01 MTND3P25-201ENST00000509243 135 ntBASIC0.29□□□□□ -2.36
TRAV27A0A087WT01 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV27A0A087WT01 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.29□□□□□ -2.36
TRAV27A0A087WT01 AC078795.3-201ENST00000602913 472 ntBASIC0.29□□□□□ -2.36
TRAV27A0A087WT01 AL139286.2-201ENST00000606838 396 ntBASIC0.29□□□□□ -2.36
TRAV27A0A087WT01 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.29□□□□□ -2.36
TRAV27A0A087WT01 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 BX322639.1-202ENST00000423987 2213 ntBASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 AC073343.1-201ENST00000328239 651 ntBASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 RNU6-545P-201ENST00000362681 104 ntBASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 ERHP2-201ENST00000402323 299 ntBASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 RNA5SP247-201ENST00000411181 105 ntBASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 RPL22P18-201ENST00000417197 377 ntBASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 MTND1P32-201ENST00000433043 938 ntBASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 AC000111.3-201ENST00000433478 193 ntBASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 USP9YP28-201ENST00000435142 589 ntBASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 AC007547.1-201ENST00000462177 490 ntBASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 RNU6-947P-201ENST00000516264 106 ntBASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 RNA5SP220-201ENST00000516298 104 ntBASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 APOOP3-201ENST00000536787 586 ntBASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 EIF4A1P12-201ENST00000551910 141 ntBASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 AC090517.1-201ENST00000569307 266 ntBASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 AC073539.2-201ENST00000597113 165 ntBASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 AC080078.2-201ENST00000603766 501 ntBASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 AL513534.2-201ENST00000603836 250 ntBASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 AC068787.1-201ENST00000623908 691 ntBASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 AL157786.1-207ENST00000627771 695 ntBASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
TRAV27A0A087WT01 RNU6-1335P-201ENST00000365426 107 ntBASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 Y_RNA.465-201ENST00000384293 102 ntBASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 RNU6-1031P-201ENST00000384773 107 ntBASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 AL353777.1-201ENST00000425552 326 ntBASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 AL606517.2-201ENST00000442855 241 ntBASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 RPS23P5-201ENST00000495419 428 ntBASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 RBBP4P6-201ENST00000508098 202 ntBASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 MIR5697-201ENST00000578045 78 ntBASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 MIR4307-201ENST00000582802 84 ntBASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 AC064872.1-201ENST00000604823 1072 ntBASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 AC097478.2-201ENST00000610572 514 ntBASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 GHRLOS.1-201ENST00000610995 70 ntBASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 AC116165.2-201ENST00000616705 206 ntBASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 MIR6513-201ENST00000621188 64 ntBASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 AL603839.4-201ENST00000624658 1005 ntBASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 Z69720.2-201ENST00000624755 279 ntBASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 AC134026.1-201ENST00000623249 2239 ntBASIC0.27□□□□□ -2.37
TRAV27A0A087WT01 snoU2-30.2-201ENST00000362805 70 ntBASIC0.26□□□□□ -2.37
TRAV27A0A087WT01 RNU1-133P-201ENST00000364867 167 ntBASIC0.26□□□□□ -2.37
TRAV27A0A087WT01 SNORD116.1-201ENST00000365628 92 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms