Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 SNORA29-201ENST00000384183 140 ntBASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 RNU6-434P-201ENST00000384376 107 ntBASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 MIR194-1-201ENST00000384892 85 ntBASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 MIR548B-201ENST00000385247 97 ntBASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 RNU6-584P-201ENST00000410350 95 ntBASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 snoU13.30-201ENST00000458951 104 ntBASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 AC010531.2-201ENST00000465012 153 ntBASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 GMFBP1-201ENST00000467831 427 ntBASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 HMGN2P9-201ENST00000476875 229 ntBASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 AC079382.1-201ENST00000493346 557 ntBASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 ZNF321P-202ENST00000550843 495 ntBASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 MIR4421-201ENST00000578133 69 ntBASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 AC078795.3-201ENST00000602913 472 ntBASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 AC009994.1-201ENST00000606889 253 ntBASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 AC008250.2-201ENST00000615261 205 ntBASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 MIR8065-201ENST00000620577 100 ntBASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 RNU6-108P-201ENST00000365558 107 ntBASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 AC108667.1-201ENST00000428618 249 ntBASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 ZNF114P1-201ENST00000453500 292 ntBASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 MTCYBP1-201ENST00000454315 1119 ntBASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 RNU7-95P-201ENST00000459222 64 ntBASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 AC008628.2-201ENST00000502605 298 ntBASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 AC067942.3-201ENST00000512025 362 ntBASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 SNORD27.1-201ENST00000516319 72 ntBASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 RN7SKP219-201ENST00000516825 296 ntBASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 RNA5SP503-201ENST00000517047 117 ntBASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 TMF1P1-201ENST00000576058 373 ntBASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 MIR4775-201ENST00000581168 75 ntBASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 AC104984.5-201ENST00000586878 94 ntBASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 Z98751.3-201ENST00000604447 521 ntBASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 MIR3976-201ENST00000606807 139 ntBASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 AL050343.2-201ENST00000607338 280 ntBASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 AC095038.3-201ENST00000634439 195 ntBASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 AC099654.5-201ENST00000636479 350 ntBASIC1.09□□□□□ -2.23
RHBDD3Q9Y3P4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.09□□□□□ -2.24
RHBDD3Q9Y3P4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 RNU6-393P-201ENST00000384475 107 ntBASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 SNORA40.6-201ENST00000391153 128 ntBASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 MIR300-201ENST00000401138 83 ntBASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 COX6CP10-201ENST00000416832 224 ntBASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 PGBD4P5-201ENST00000445958 426 ntBASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 MTND1P18-201ENST00000448191 573 ntBASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 AC090517.1-201ENST00000569307 266 ntBASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 MIR4298-201ENST00000584380 73 ntBASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 AC005014.3-201ENST00000605985 190 ntBASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 AC004223.4-201ENST00000612426 332 ntBASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 AC091812.1-201ENST00000432235 1948 ntBASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 MTND4P4-201ENST00000439033 1366 ntBASIC1.08□□□□□ -2.24
RHBDD3Q9Y3P4 SNORA7.1-201ENST00000363750 139 ntBASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 RNU6-378P-201ENST00000384324 107 ntBASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 MIR515-2-201ENST00000384883 83 ntBASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 MIR515-1-201ENST00000384884 83 ntBASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 AL117342.1-201ENST00000404861 406 ntBASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 MTATP6P19-201ENST00000413797 659 ntBASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 TOMM22P2-201ENST00000430735 237 ntBASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 HSFY7P-201ENST00000432672 318 ntBASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 HSFY8P-201ENST00000437934 318 ntBASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 PRPS1P1-201ENST00000445305 876 ntBASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 AC009474.2-201ENST00000451383 136 ntBASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 HSFY5P-201ENST00000453726 309 ntBASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 AK3P2-201ENST00000507976 429 ntBASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 AC069113.1-201ENST00000517763 267 ntBASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 AC090115.3-201ENST00000553218 849 ntBASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 CYP3A52P-201ENST00000563326 91 ntBASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 HSPE1P19-201ENST00000603327 295 ntBASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 MIR6715A-201ENST00000615929 79 ntBASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.07□□□□□ -2.24
RHBDD3Q9Y3P4 RNU6-1214P-201ENST00000363650 109 ntBASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 RPS3AP3-201ENST00000411933 242 ntBASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 AC004965.1-201ENST00000413033 213 ntBASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 AC132479.1-201ENST00000449160 144 ntBASIC1.06□□□□□ -2.24
RHBDD3Q9Y3P4 MTCO2P6-201ENST00000463134 685 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms