Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 RNA5SP481-201ENST00000516814 122 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 MIR4498-201ENST00000577599 66 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 AL359821.1-201ENST00000605519 182 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 SNORD114-21-201ENST00000606412 72 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 TUSC7.1-201ENST00000610969 165 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 AL078595.3-201ENST00000623815 1166 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 AC106754.1-201ENST00000562632 1513 ntBASIC0.74□□□□□ -2.29
HHLA3Q9XRX5 MTND4P14-201ENST00000435799 1354 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 RNU1-96P-201ENST00000364163 162 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 Y_RNA.367-201ENST00000365544 101 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 RPS29P13-201ENST00000402041 169 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 MTCO1P21-201ENST00000416634 589 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 RPL23AP95-201ENST00000426806 265 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 Z82205.1-201ENST00000428456 297 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 AL133396.1-201ENST00000432048 687 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 DYNLT3P2-201ENST00000442517 295 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 AL133217.1-201ENST00000450980 425 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 AC007395.1-201ENST00000451333 677 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 ZNF114P1-201ENST00000453500 292 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 AL162395.1-201ENST00000457882 422 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 RPL31P3-201ENST00000458430 332 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 MTCO2P6-201ENST00000463134 685 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 RNU6-311P-201ENST00000516224 102 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 RNU6-1041P-201ENST00000516254 102 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 AC109479.2-201ENST00000517842 174 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 CENPUP1-201ENST00000526649 1202 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 ELOCP32-201ENST00000548625 324 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 AL512310.8-201ENST00000550183 120 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 EIF4A1P12-201ENST00000551910 141 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 BNIP3P8-201ENST00000597863 560 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 NIFKP6-201ENST00000598115 845 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 MZT1P2-201ENST00000604387 248 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 AL365434.2-201ENST00000607979 234 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 AP000240.1-201ENST00000609910 452 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 MIR7844-201ENST00000616161 122 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 AC012676.2-201ENST00000619258 186 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 MTND5P17-201ENST00000418405 1603 ntBASIC0.73□□□□□ -2.29
HHLA3Q9XRX5 RNU1-76P-201ENST00000362903 159 ntBASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 RNU6-1287P-201ENST00000362914 107 ntBASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 RNU4-56P-201ENST00000364700 142 ntBASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 SNORA4.2-201ENST00000365313 147 ntBASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 Y_RNA.338-201ENST00000365320 114 ntBASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 SNORA36A-201ENST00000384221 132 ntBASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 RNU6-1060P-201ENST00000384664 107 ntBASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 AL117339.3-201ENST00000418733 162 ntBASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 AC060773.1-201ENST00000421698 310 ntBASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 snoU13.27-201ENST00000459278 104 ntBASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 AL163973.1-201ENST00000484753 577 ntBASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 RNA5SP404-201ENST00000517118 132 ntBASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 AC098848.2-201ENST00000588023 330 ntBASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 VN1R107P-201ENST00000601784 209 ntBASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 AL133173.2-201ENST00000614270 90 ntBASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 AC126177.8-201ENST00000618339 1015 ntBASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 AL391516.1-201ENST00000554380 2449 ntBASIC0.72□□□□□ -2.29
HHLA3Q9XRX5 AC092268.1-201ENST00000342691 405 ntBASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 RNU6-552P-201ENST00000362869 119 ntBASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 RNU6-877P-201ENST00000383868 107 ntBASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 AL356776.1-201ENST00000406574 447 ntBASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 RNU2-8P-201ENST00000410727 190 ntBASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 AC073910.1-201ENST00000445047 438 ntBASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 COX6CP14-201ENST00000469580 174 ntBASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 MTCO3P7-201ENST00000510008 774 ntBASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 RNU6-856P-201ENST00000516959 98 ntBASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 AL442163.3-201ENST00000554110 156 ntBASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 MIR4775-201ENST00000581168 75 ntBASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 Z98751.3-201ENST00000604447 521 ntBASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 Z99289.3-201ENST00000605586 594 ntBASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 AC008945.2-201ENST00000606056 604 ntBASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 AC009994.1-201ENST00000606889 253 ntBASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 AC008147.4-201ENST00000617570 1204 ntBASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 AC022306.3-201ENST00000619930 550 ntBASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 U6.114-201ENST00000636407 96 ntBASIC0.71□□□□□ -2.3
HHLA3Q9XRX5 RNU5F-7P-201ENST00000363696 115 ntBASIC0.7□□□□□ -2.3
HHLA3Q9XRX5 RNU4-38P-201ENST00000364472 129 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms