Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.49□□□□□ -2.33
SCN8AQ9UQD0 AL591043.1-201ENST00000432461 424 ntBASIC0.49□□□□□ -2.33
SCN8AQ9UQD0 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.49□□□□□ -2.33
SCN8AQ9UQD0 MTND5P2-201ENST00000442927 1142 ntBASIC0.49□□□□□ -2.33
SCN8AQ9UQD0 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.49□□□□□ -2.33
SCN8AQ9UQD0 AC090142.3-201ENST00000519012 385 ntBASIC0.49□□□□□ -2.33
SCN8AQ9UQD0 AC011979.2-201ENST00000527568 352 ntBASIC0.49□□□□□ -2.33
SCN8AQ9UQD0 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 AC137499.1-201ENST00000427602 88 ntBASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 HMGN1P33-201ENST00000432945 451 ntBASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 RNU5F-4P-201ENST00000516581 114 ntBASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 AC015688.6-201ENST00000577737 104 ntBASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 AC068787.1-201ENST00000623908 691 ntBASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 AC092268.1-201ENST00000342691 405 ntBASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 RNU6-1141P-201ENST00000364520 107 ntBASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 SNORD31B-201ENST00000364977 69 ntBASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 AC244670.1-201ENST00000436879 112 ntBASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 RPS23P5-201ENST00000495419 428 ntBASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 AC068790.6-201ENST00000602558 258 ntBASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 AC026585.1-201ENST00000619582 524 ntBASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 AP002782.1-201ENST00000623107 614 ntBASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.48□□□□□ -2.33
SCN8AQ9UQD0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.47□□□□□ -2.33
SCN8AQ9UQD0 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
SCN8AQ9UQD0 MIR340-201ENST00000362125 95 ntBASIC0.47□□□□□ -2.33
SCN8AQ9UQD0 RNU6-105P-201ENST00000363909 104 ntBASIC0.47□□□□□ -2.33
SCN8AQ9UQD0 MTCYBP2-201ENST00000407745 171 ntBASIC0.47□□□□□ -2.33
SCN8AQ9UQD0 MIR1284-201ENST00000408337 120 ntBASIC0.47□□□□□ -2.33
SCN8AQ9UQD0 EEF1A1P40-201ENST00000412883 573 ntBASIC0.47□□□□□ -2.33
SCN8AQ9UQD0 AC060773.1-201ENST00000421698 310 ntBASIC0.47□□□□□ -2.33
SCN8AQ9UQD0 AC010531.2-201ENST00000465012 153 ntBASIC0.47□□□□□ -2.33
SCN8AQ9UQD0 RNA5SP255-201ENST00000516370 107 ntBASIC0.47□□□□□ -2.33
SCN8AQ9UQD0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.47□□□□□ -2.33
SCN8AQ9UQD0 MIR3664-201ENST00000579074 99 ntBASIC0.47□□□□□ -2.33
SCN8AQ9UQD0 MIR5692A1-201ENST00000580523 69 ntBASIC0.47□□□□□ -2.33
SCN8AQ9UQD0 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.47□□□□□ -2.33
SCN8AQ9UQD0 AL034555.1-201ENST00000604816 211 ntBASIC0.47□□□□□ -2.33
SCN8AQ9UQD0 AC121334.2-201ENST00000605387 271 ntBASIC0.47□□□□□ -2.33
SCN8AQ9UQD0 AL445523.1-201ENST00000451184 1362 ntBASIC0.47□□□□□ -2.33
SCN8AQ9UQD0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 AL162395.1-201ENST00000457882 422 ntBASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 AC007547.1-201ENST00000462177 490 ntBASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 RPL39P38-201ENST00000467018 153 ntBASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 AC022447.4-201ENST00000504053 364 ntBASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 AC021146.8-201ENST00000507455 733 ntBASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 MIR4709-201ENST00000577272 72 ntBASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 DEFB131E-202ENST00000602581 683 ntBASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 RNU6-1123P-201ENST00000362347 106 ntBASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 SNORD32B-201ENST00000364460 84 ntBASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 MTCYBP39-201ENST00000437562 491 ntBASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 RNU6-201P-201ENST00000517100 61 ntBASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 APOOP3-201ENST00000536787 586 ntBASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 MTND4LP25-201ENST00000570218 163 ntBASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 GHRLOS.1-201ENST00000610995 70 ntBASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 MIR2909-201ENST00000617113 69 ntBASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.46□□□□□ -2.34
SCN8AQ9UQD0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 snoU2-30.2-201ENST00000362805 70 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 Y_RNA.85-201ENST00000363014 111 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 RNU6-527P-201ENST00000363425 104 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 RNU6-224P-201ENST00000384055 107 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 RPS3AP37-201ENST00000419176 745 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 AC063976.4-201ENST00000421971 163 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 AC010099.3-201ENST00000423896 409 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 TXNL1P1-201ENST00000429528 554 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 RPS20P10-201ENST00000451209 253 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 AL122001.1-201ENST00000457027 370 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 COX6CP6-201ENST00000490840 228 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 AC011406.1-201ENST00000512440 370 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 SNORA62.5-201ENST00000516634 120 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 SUMO2P16-201ENST00000519475 264 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 MIR3923-201ENST00000579521 83 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 AC108747.1-201ENST00000609508 535 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 AC104073.3-201ENST00000610942 955 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 uc_338.17-201ENST00000619633 179 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 SNORD3E-202ENST00000627253 216 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 AC004808.1-201ENST00000627671 721 ntBASIC0.45□□□□□ -2.34
SCN8AQ9UQD0 U4.7-201ENST00000638126 106 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms