Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.54□□□□□ -2.32
VPS29Q9UBQ0 AC048334.1-201ENST00000477975 159 ntBASIC0.54□□□□□ -2.32
VPS29Q9UBQ0 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.54□□□□□ -2.32
VPS29Q9UBQ0 AL590705.4-201ENST00000532209 134 ntBASIC0.54□□□□□ -2.32
VPS29Q9UBQ0 AL121579.1-201ENST00000555129 305 ntBASIC0.54□□□□□ -2.32
VPS29Q9UBQ0 AC090888.2-201ENST00000559765 1144 ntBASIC0.54□□□□□ -2.32
VPS29Q9UBQ0 AC068790.6-201ENST00000602558 258 ntBASIC0.54□□□□□ -2.32
VPS29Q9UBQ0 MTND3P19-201ENST00000603825 345 ntBASIC0.54□□□□□ -2.32
VPS29Q9UBQ0 AL139022.2-201ENST00000606934 443 ntBASIC0.54□□□□□ -2.32
VPS29Q9UBQ0 AL158211.2-201ENST00000607282 395 ntBASIC0.54□□□□□ -2.32
VPS29Q9UBQ0 AC136475.10-201ENST00000620253 385 ntBASIC0.54□□□□□ -2.32
VPS29Q9UBQ0 Z69720.2-201ENST00000624755 279 ntBASIC0.54□□□□□ -2.32
VPS29Q9UBQ0 MTND4P16-201ENST00000466108 1367 ntBASIC0.54□□□□□ -2.32
VPS29Q9UBQ0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
VPS29Q9UBQ0 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
VPS29Q9UBQ0 Y_RNA.132-201ENST00000363421 102 ntBASIC0.53□□□□□ -2.32
VPS29Q9UBQ0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.53□□□□□ -2.32
VPS29Q9UBQ0 AC114491.1-201ENST00000416095 246 ntBASIC0.53□□□□□ -2.32
VPS29Q9UBQ0 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.53□□□□□ -2.32
VPS29Q9UBQ0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.53□□□□□ -2.32
VPS29Q9UBQ0 SNRPFP3-201ENST00000457792 225 ntBASIC0.53□□□□□ -2.32
VPS29Q9UBQ0 HMGN1P12-201ENST00000499125 195 ntBASIC0.53□□□□□ -2.32
VPS29Q9UBQ0 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.53□□□□□ -2.32
VPS29Q9UBQ0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.53□□□□□ -2.32
VPS29Q9UBQ0 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.53□□□□□ -2.32
VPS29Q9UBQ0 MIR4742-201ENST00000581069 85 ntBASIC0.53□□□□□ -2.32
VPS29Q9UBQ0 MIR3118-1-201ENST00000581787 76 ntBASIC0.53□□□□□ -2.32
VPS29Q9UBQ0 AC022432.1-201ENST00000595739 310 ntBASIC0.53□□□□□ -2.32
VPS29Q9UBQ0 AC112187.2-201ENST00000604345 283 ntBASIC0.53□□□□□ -2.32
VPS29Q9UBQ0 PCGEM1.1-201ENST00000613431 131 ntBASIC0.53□□□□□ -2.32
VPS29Q9UBQ0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.53□□□□□ -2.32
VPS29Q9UBQ0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.53□□□□□ -2.32
VPS29Q9UBQ0 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.53□□□□□ -2.32
VPS29Q9UBQ0 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 RNA5SP361-201ENST00000362686 118 ntBASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 RNU6-692P-201ENST00000384496 107 ntBASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 RNU6-293P-201ENST00000411259 106 ntBASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 MTATP6P20-201ENST00000414147 562 ntBASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 CALM2P2-201ENST00000428512 440 ntBASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 MTND3P1-201ENST00000441336 220 ntBASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 MTCYBP1-201ENST00000454315 1119 ntBASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 AC007547.1-201ENST00000462177 490 ntBASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 MTND3P25-201ENST00000509243 135 ntBASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 FABP5P5-201ENST00000515537 406 ntBASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 RNA5SP337-201ENST00000517007 109 ntBASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 AP003484.1-201ENST00000530974 250 ntBASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 CYP4A27P-201ENST00000567218 190 ntBASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 AC105148.1-201ENST00000604961 409 ntBASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 RPL17P51-201ENST00000605218 238 ntBASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 AC021506.2-201ENST00000612354 169 ntBASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 MIR8070-201ENST00000616510 88 ntBASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 MIR338-201ENST00000636369 67 ntBASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
VPS29Q9UBQ0 MIR942-201ENST00000401111 86 ntBASIC0.51□□□□□ -2.33
VPS29Q9UBQ0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.51□□□□□ -2.33
VPS29Q9UBQ0 AC011233.1-201ENST00000422812 283 ntBASIC0.51□□□□□ -2.33
VPS29Q9UBQ0 RPL23AP95-201ENST00000426806 265 ntBASIC0.51□□□□□ -2.33
VPS29Q9UBQ0 RPS29P1-201ENST00000465274 159 ntBASIC0.51□□□□□ -2.33
VPS29Q9UBQ0 RPS27P22-201ENST00000478056 241 ntBASIC0.51□□□□□ -2.33
VPS29Q9UBQ0 SNORD79.1-201ENST00000516069 84 ntBASIC0.51□□□□□ -2.33
VPS29Q9UBQ0 EIF4A1P12-201ENST00000551910 141 ntBASIC0.51□□□□□ -2.33
VPS29Q9UBQ0 AC073539.2-201ENST00000597113 165 ntBASIC0.51□□□□□ -2.33
VPS29Q9UBQ0 AC080013.3-201ENST00000606839 578 ntBASIC0.51□□□□□ -2.33
VPS29Q9UBQ0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.51□□□□□ -2.33
VPS29Q9UBQ0 AC104465.1-201ENST00000611365 139 ntBASIC0.51□□□□□ -2.33
VPS29Q9UBQ0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.51□□□□□ -2.33
VPS29Q9UBQ0 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 SNORA33-201ENST00000363664 130 ntBASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 SNORA24.1-201ENST00000384401 135 ntBASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 RNU6-1257P-201ENST00000384625 110 ntBASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 SNORA26.3-201ENST00000391119 136 ntBASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 RNU2-3P-201ENST00000410144 191 ntBASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 RNU6-1054P-201ENST00000411293 104 ntBASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 USP9YP28-201ENST00000435142 589 ntBASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 RPL22P17-201ENST00000438729 315 ntBASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 C1DP4-201ENST00000455429 424 ntBASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 AC092991.1-201ENST00000477176 376 ntBASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 BET1P1-201ENST00000482276 359 ntBASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 RPS23P5-201ENST00000495419 428 ntBASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 RBBP4P6-201ENST00000508098 202 ntBASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 AC067942.3-201ENST00000512025 362 ntBASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 RNU6-377P-201ENST00000515965 102 ntBASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 BNIP3P16-201ENST00000589779 534 ntBASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 AL359740.1-201ENST00000624340 592 ntBASIC0.5□□□□□ -2.33
VPS29Q9UBQ0 AL391994.1-201ENST00000254724 282 ntBASIC0.49□□□□□ -2.33
VPS29Q9UBQ0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms