Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 AC023824.2-201ENST00000566185 400 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 AC012493.2-201ENST00000595083 291 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 AC127459.3-201ENST00000624328 466 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 AC010889.1-201ENST00000566193 2666 ntBASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 SNORD113-8-201ENST00000363497 74 ntBASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 Y_RNA.230-201ENST00000364348 109 ntBASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 AC093578.1-201ENST00000415219 368 ntBASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 AL390729.2-201ENST00000416137 156 ntBASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 AL590135.1-201ENST00000422215 156 ntBASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 AC019205.3-201ENST00000424573 156 ntBASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 WARS2P1-201ENST00000429678 537 ntBASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 snoU13.14-201ENST00000459372 104 ntBASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 AC021205.2-201ENST00000480069 347 ntBASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 RNU6-496P-201ENST00000516145 99 ntBASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 Y_RNA.673-201ENST00000516306 88 ntBASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 Y_RNA.700-201ENST00000516806 100 ntBASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 MIR2276-201ENST00000516886 89 ntBASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 CYP4A27P-201ENST00000567218 190 ntBASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 MIR5695-201ENST00000579717 85 ntBASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 MIR4423-201ENST00000580922 80 ntBASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 AL391813.1-201ENST00000603098 260 ntBASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 AC005520.5-201ENST00000613926 164 ntBASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 MIR7975-201ENST00000619350 68 ntBASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.49□□□□□ -1.85
PPARGC1AQ9UBK2 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 RNU6-290P-201ENST00000365212 101 ntBASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 RNU6-245P-201ENST00000384020 107 ntBASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 SNORA36A-201ENST00000384221 132 ntBASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 Y_RNA.477-201ENST00000384352 108 ntBASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 MIR329-1-201ENST00000385028 80 ntBASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 AC005002.2-201ENST00000438228 269 ntBASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 AC007395.1-201ENST00000451333 677 ntBASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 AC008155.2-201ENST00000464337 397 ntBASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 AIG1P1-201ENST00000503376 148 ntBASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 SNORA31.21-201ENST00000517180 77 ntBASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 AC107934.2-201ENST00000518653 310 ntBASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 AC025281.1-201ENST00000567026 265 ntBASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 RPS15AP11-201ENST00000594193 385 ntBASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 AL078605.1-201ENST00000603529 500 ntBASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 SNORD113-5-201ENST00000607261 78 ntBASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.48□□□□□ -1.85
PPARGC1AQ9UBK2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 RNA5SP361-201ENST00000362686 118 ntBASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 RNU6-937P-201ENST00000384325 106 ntBASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 AC126124.2-201ENST00000413542 321 ntBASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 YME1L1P1-201ENST00000429435 297 ntBASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 AC112220.1-201ENST00000434628 355 ntBASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 AP000705.1-201ENST00000454567 350 ntBASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 HMGN1P18-201ENST00000457642 277 ntBASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 AC090525.1-201ENST00000479116 478 ntBASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 RPL26P26-201ENST00000480251 434 ntBASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 DEFB108E-201ENST00000524692 240 ntBASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 BX284668.6-201ENST00000606899 438 ntBASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 MIR92B-201ENST00000607575 96 ntBASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 AC107294.3-201ENST00000609211 526 ntBASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 AC011476.5-201ENST00000615594 130 ntBASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 SNORD98-201ENST00000636377 67 ntBASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 AC007496.3-201ENST00000624987 3443 ntBASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 AP003122.5-201ENST00000527668 3766 ntBASIC3.47□□□□□ -1.85
PPARGC1AQ9UBK2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
PPARGC1AQ9UBK2 BX322639.1-202ENST00000423987 2213 ntBASIC3.46□□□□□ -1.86
PPARGC1AQ9UBK2 RNA5SP197-201ENST00000363357 119 ntBASIC3.46□□□□□ -1.86
PPARGC1AQ9UBK2 RNY1-201ENST00000364228 113 ntBASIC3.46□□□□□ -1.86
PPARGC1AQ9UBK2 Y_RNA.541-201ENST00000384640 113 ntBASIC3.46□□□□□ -1.86
PPARGC1AQ9UBK2 RNA5SP354-201ENST00000391247 136 ntBASIC3.46□□□□□ -1.86
PPARGC1AQ9UBK2 RNU6-1001P-201ENST00000411265 100 ntBASIC3.46□□□□□ -1.86
PPARGC1AQ9UBK2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.46□□□□□ -1.86
PPARGC1AQ9UBK2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.46□□□□□ -1.86
PPARGC1AQ9UBK2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.46□□□□□ -1.86
PPARGC1AQ9UBK2 AC073901.1-201ENST00000462471 408 ntBASIC3.46□□□□□ -1.86
PPARGC1AQ9UBK2 CENPBD1P1-201ENST00000464061 469 ntBASIC3.46□□□□□ -1.86
PPARGC1AQ9UBK2 HMGB1P35-201ENST00000503360 598 ntBASIC3.46□□□□□ -1.86
PPARGC1AQ9UBK2 SEPT14P8-201ENST00000508026 178 ntBASIC3.46□□□□□ -1.86
PPARGC1AQ9UBK2 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.46□□□□□ -1.86
PPARGC1AQ9UBK2 RNU6-111P-201ENST00000517179 105 ntBASIC3.46□□□□□ -1.86
PPARGC1AQ9UBK2 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.46□□□□□ -1.86
PPARGC1AQ9UBK2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.46□□□□□ -1.86
PPARGC1AQ9UBK2 UBL5P4-201ENST00000562584 236 ntBASIC3.46□□□□□ -1.86
PPARGC1AQ9UBK2 AC009779.6-201ENST00000603972 165 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 1507.9 ms