Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.16□□□□□ -2.38
COMMD3Q9UBI1 RNU7-14P-201ENST00000459331 62 ntBASIC0.16□□□□□ -2.38
COMMD3Q9UBI1 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.16□□□□□ -2.38
COMMD3Q9UBI1 SNORA70.12-201ENST00000516084 153 ntBASIC0.16□□□□□ -2.38
COMMD3Q9UBI1 RNU2-34P-201ENST00000516534 121 ntBASIC0.16□□□□□ -2.38
COMMD3Q9UBI1 RNU6-922P-201ENST00000516753 99 ntBASIC0.16□□□□□ -2.38
COMMD3Q9UBI1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.16□□□□□ -2.38
COMMD3Q9UBI1 AC109446.1-201ENST00000566172 220 ntBASIC0.16□□□□□ -2.38
COMMD3Q9UBI1 MIR4711-201ENST00000578274 70 ntBASIC0.16□□□□□ -2.38
COMMD3Q9UBI1 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.16□□□□□ -2.38
COMMD3Q9UBI1 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.16□□□□□ -2.38
COMMD3Q9UBI1 AL596327.1-201ENST00000603629 213 ntBASIC0.16□□□□□ -2.38
COMMD3Q9UBI1 AC064872.1-201ENST00000604823 1072 ntBASIC0.16□□□□□ -2.38
COMMD3Q9UBI1 AC242852.1-201ENST00000612151 96 ntBASIC0.16□□□□□ -2.38
COMMD3Q9UBI1 AC116165.2-201ENST00000616705 206 ntBASIC0.16□□□□□ -2.38
COMMD3Q9UBI1 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.16□□□□□ -2.38
COMMD3Q9UBI1 AC244015.1-201ENST00000622301 99 ntBASIC0.16□□□□□ -2.38
COMMD3Q9UBI1 AC006927.4-201ENST00000639187 543 ntBASIC0.16□□□□□ -2.38
COMMD3Q9UBI1 CASC19-280ENST00000642102 1351 ntBASIC0.16□□□□□ -2.38
COMMD3Q9UBI1 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 MIR499A-201ENST00000384903 122 ntBASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 SNORD41-201ENST00000386967 70 ntBASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 SNORA16.2-201ENST00000390991 127 ntBASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 RPL21P1-201ENST00000399532 476 ntBASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 AL031779.1-201ENST00000415663 330 ntBASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 RPL23AP30-201ENST00000432419 501 ntBASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 RNU7-90P-201ENST00000459216 62 ntBASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 AL929325.1-201ENST00000603096 117 ntBASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 AC144521.1-201ENST00000607148 956 ntBASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 AC017083.3-201ENST00000609955 700 ntBASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 AC092106.3-201ENST00000611308 722 ntBASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.15□□□□□ -2.39
COMMD3Q9UBI1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 AC092268.1-201ENST00000342691 405 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 AC090625.1-201ENST00000357130 210 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 U3.9-201ENST00000363823 204 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 Y_RNA.192-201ENST00000363977 102 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 Y_RNA.224-201ENST00000364308 111 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 RNU5E-7P-201ENST00000365290 117 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 RNY3P13-201ENST00000365542 102 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 RNU6-1179P-201ENST00000384667 107 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 MIR578-201ENST00000384828 96 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 Y_RNA.578-201ENST00000390903 88 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 RPS20P2-201ENST00000402520 389 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 RPEP5-201ENST00000441137 268 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 AL031313.1-201ENST00000448435 256 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 NFU1P2-201ENST00000448700 469 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 AC109445.1-201ENST00000512356 383 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 SNORA68.3-201ENST00000515906 83 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 RNU5F-4P-201ENST00000516581 114 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 MTND2P7-201ENST00000521337 640 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 AC007834.2-201ENST00000536310 343 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 AC021231.3-201ENST00000558497 370 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 MTATP6P25-201ENST00000574491 261 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 MIR3124-201ENST00000582636 67 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 BNIP3P26-201ENST00000600827 554 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 AL390123.1-201ENST00000603216 237 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 AL078603.1-201ENST00000603824 313 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 BCRP9-201ENST00000605312 388 ntBASIC0.14□□□□□ -2.39
COMMD3Q9UBI1 BX322639.1-202ENST00000423987 2213 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 SNORA33-201ENST00000363664 130 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 RNU6-105P-201ENST00000363909 104 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 RNU6-1141P-201ENST00000364520 107 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 RNU6-769P-201ENST00000384407 104 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 RNU6-1026P-201ENST00000384465 108 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 MIR653-201ENST00000385279 96 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 SNORA26.3-201ENST00000391119 136 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 SNORD99-201ENST00000408612 74 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 MTND1P32-201ENST00000433043 938 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 AL360271.2-201ENST00000447710 161 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 AL049829.1-201ENST00000465411 156 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 AL049830.1-201ENST00000468034 425 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 AC021146.8-201ENST00000507455 733 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 RNU6-405P-201ENST00000516637 110 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 RNU6-467P-201ENST00000517027 110 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 AC024995.1-201ENST00000523014 93 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 AC026616.1-201ENST00000523157 525 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 AC025627.3-201ENST00000582078 182 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 AL360219.1-201ENST00000610230 366 ntBASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.13□□□□□ -2.39
COMMD3Q9UBI1 PCGEM1.1-201ENST00000613431 131 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms