Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNU6-38P-201ENST00000384085 107 ntBASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 RNA5SP465-201ENST00000391195 109 ntBASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 AP000275.1-201ENST00000411943 390 ntBASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 ARL5AP1-201ENST00000418991 388 ntBASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 AC096920.1-201ENST00000423991 241 ntBASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 AL603825.1-201ENST00000438481 80 ntBASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 RNU6-333P-201ENST00000459117 107 ntBASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 SNORD13-201ENST00000459299 104 ntBASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 Y_RNA.638-201ENST00000459374 113 ntBASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 RNU6-1037P-201ENST00000459571 107 ntBASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 AC093534.1-201ENST00000504977 132 ntBASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 AC093259.1-201ENST00000509755 300 ntBASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 SNORA31.16-201ENST00000516773 139 ntBASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 AC087854.1-201ENST00000519706 414 ntBASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 MIR4419B-201ENST00000577260 68 ntBASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 MIR3923-201ENST00000579521 83 ntBASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 AC092747.3-201ENST00000603769 301 ntBASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 AC068792.1-201ENST00000621354 417 ntBASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 AL359880.1-201ENST00000621879 266 ntBASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 MIR1248-201ENST00000629190 106 ntBASIC1.54□□□□□ -2.16
CLCF1Q9UBD9 RNA5SP276-201ENST00000362580 94 ntBASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 Y_RNA.99-201ENST00000363138 105 ntBASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 Y_RNA.504-201ENST00000384481 104 ntBASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 SNORD73A-201ENST00000386062 65 ntBASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 SNORA26.3-201ENST00000391119 136 ntBASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 MTCYBP2-201ENST00000407745 171 ntBASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 AL357139.1-201ENST00000407792 426 ntBASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 MTND2P29-201ENST00000438595 412 ntBASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 RPL23AP3-201ENST00000453844 468 ntBASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 PMCHL2-203ENST00000457791 237 ntBASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 Y_RNA.654-201ENST00000497848 106 ntBASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 RNU6-1038P-201ENST00000516516 104 ntBASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 RNU6-567P-201ENST00000516746 107 ntBASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 AC021231.3-201ENST00000558497 370 ntBASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CLCF1Q9UBD9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 RNU6-26P-201ENST00000383985 107 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 Y_RNA.559-201ENST00000384686 107 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 RNU11-3P-201ENST00000391111 133 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 SNORA17.3-201ENST00000391159 129 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 SNORA12-201ENST00000391162 147 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 MIR1283-2-201ENST00000408621 87 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 RNA5SP489-201ENST00000410986 109 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 AL158823.1-201ENST00000418441 478 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 BX510359.4-201ENST00000423750 193 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 AL353689.1-201ENST00000438895 199 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 AC008628.2-201ENST00000502605 298 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 HMGB3P17-201ENST00000504195 649 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 RNU6-1069P-201ENST00000516612 133 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 Y_RNA.693-201ENST00000516641 110 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 RNU6-835P-201ENST00000516974 104 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 RNU6-323P-201ENST00000521915 107 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 MIR3618-201ENST00000580330 88 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 AC005034.5-201ENST00000604219 466 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 BNIP3P10-201ENST00000605360 577 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 MIR502-201ENST00000606349 86 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 AL627230.6-201ENST00000611129 280 ntBASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.52□□□□□ -2.17
CLCF1Q9UBD9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 U3.9-201ENST00000363823 204 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 Y_RNA.194-201ENST00000363985 102 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 RNU6-1164P-201ENST00000364428 107 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 Y_RNA.378-201ENST00000365652 113 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 CALM2P3-201ENST00000400429 449 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 RNU6-648P-201ENST00000410190 107 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 RNA5SP201-201ENST00000410316 124 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 MTND1P1-201ENST00000445453 368 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 MTND3P16-201ENST00000452205 344 ntBASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.51□□□□□ -2.17
CLCF1Q9UBD9 MRPS17P9-201ENST00000511924 393 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms