Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 BMS1P22-201ENST00000414726 313 ntBASIC2.97□□□□□ -1.93
COL20A1Q9P218 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.97□□□□□ -1.93
COL20A1Q9P218 AL121594.1-201ENST00000475906 575 ntBASIC2.97□□□□□ -1.93
COL20A1Q9P218 AC103975.1-201ENST00000482506 483 ntBASIC2.97□□□□□ -1.93
COL20A1Q9P218 RPL23AP75-201ENST00000491601 451 ntBASIC2.97□□□□□ -1.93
COL20A1Q9P218 HMGB1P35-201ENST00000503360 598 ntBASIC2.97□□□□□ -1.93
COL20A1Q9P218 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.97□□□□□ -1.93
COL20A1Q9P218 SNORA25.11-201ENST00000515935 105 ntBASIC2.97□□□□□ -1.93
COL20A1Q9P218 RNA5SP320-201ENST00000516263 124 ntBASIC2.97□□□□□ -1.93
COL20A1Q9P218 RNU6-1153P-201ENST00000516760 105 ntBASIC2.97□□□□□ -1.93
COL20A1Q9P218 COX6CP5-201ENST00000527162 228 ntBASIC2.97□□□□□ -1.93
COL20A1Q9P218 AC023442.1-201ENST00000531247 422 ntBASIC2.97□□□□□ -1.93
COL20A1Q9P218 SNRPGP18-201ENST00000553000 214 ntBASIC2.97□□□□□ -1.93
COL20A1Q9P218 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.97□□□□□ -1.93
COL20A1Q9P218 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.97□□□□□ -1.93
COL20A1Q9P218 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.97□□□□□ -1.93
COL20A1Q9P218 AL670379.2-201ENST00000604983 252 ntBASIC2.97□□□□□ -1.93
COL20A1Q9P218 AC108206.1-201ENST00000570186 4159 ntBASIC2.97□□□□□ -1.93
COL20A1Q9P218 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.97□□□□□ -1.93
COL20A1Q9P218 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
COL20A1Q9P218 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL20A1Q9P218 RNU6-1115P-201ENST00000362490 106 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 RNU5B-2P-201ENST00000363036 113 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 Y_RNA.428-201ENST00000384078 102 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 Y_RNA.463-201ENST00000384271 102 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 MIR559-201ENST00000385188 96 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 U6atac.2-201ENST00000408644 118 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 AL513477.1-202ENST00000417061 214 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 AL358453.1-201ENST00000422522 250 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 AC012306.1-201ENST00000423267 114 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 AIMP1P2-201ENST00000425294 312 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.96□□□□□ -1.94
COL20A1Q9P218 AL513328.1-201ENST00000446460 224 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 snoU13.30-201ENST00000458951 104 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 Y_RNA.631-201ENST00000459607 101 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.96□□□□□ -1.94
COL20A1Q9P218 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.96□□□□□ -1.94
COL20A1Q9P218 AC104581.2-201ENST00000572227 430 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 MIR5701-3-201ENST00000578890 82 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 MIR3923-201ENST00000579521 83 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.96□□□□□ -1.94
COL20A1Q9P218 MIR3616-201ENST00000584070 92 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 MIR5701-1-201ENST00000585138 82 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
COL20A1Q9P218 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 AL034555.1-201ENST00000604816 211 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 RPL23AP88-201ENST00000605759 454 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 AC100812.1-201ENST00000607622 580 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.96□□□□□ -1.94
COL20A1Q9P218 MIR5701-2-201ENST00000615634 82 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.96□□□□□ -1.94
COL20A1Q9P218 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.96□□□□□ -1.94
COL20A1Q9P218 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
COL20A1Q9P218 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
COL20A1Q9P218 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.95□□□□□ -1.94
COL20A1Q9P218 AC026241.1-201ENST00000517873 2142 ntBASIC2.95□□□□□ -1.94
COL20A1Q9P218 Y_RNA.40-201ENST00000362645 93 ntBASIC2.95□□□□□ -1.94
COL20A1Q9P218 Y_RNA.112-201ENST00000363250 102 ntBASIC2.95□□□□□ -1.94
COL20A1Q9P218 Y_RNA.138-201ENST00000363462 102 ntBASIC2.95□□□□□ -1.94
COL20A1Q9P218 SNORD115-32-201ENST00000364079 82 ntBASIC2.95□□□□□ -1.94
COL20A1Q9P218 Y_RNA.252-201ENST00000364556 101 ntBASIC2.95□□□□□ -1.94
COL20A1Q9P218 MIR518C-201ENST00000384822 101 ntBASIC2.95□□□□□ -1.94
COL20A1Q9P218 MIR548P-201ENST00000408336 84 ntBASIC2.95□□□□□ -1.94
COL20A1Q9P218 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.95□□□□□ -1.94
COL20A1Q9P218 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.95□□□□□ -1.94
COL20A1Q9P218 AC087477.1-201ENST00000465747 340 ntBASIC2.95□□□□□ -1.94
COL20A1Q9P218 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.95□□□□□ -1.94
COL20A1Q9P218 AC021146.2-201ENST00000504736 556 ntBASIC2.95□□□□□ -1.94
COL20A1Q9P218 Y_RNA.706-201ENST00000516933 99 ntBASIC2.95□□□□□ -1.94
COL20A1Q9P218 SNORD116.3-201ENST00000517176 78 ntBASIC2.95□□□□□ -1.94
COL20A1Q9P218 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.95□□□□□ -1.94
COL20A1Q9P218 AC004584.2-201ENST00000570407 410 ntBASIC2.95□□□□□ -1.94
COL20A1Q9P218 MIR3199-1-201ENST00000582434 88 ntBASIC2.95□□□□□ -1.94
COL20A1Q9P218 AC069294.1-201ENST00000608397 350 ntBASIC2.95□□□□□ -1.94
COL20A1Q9P218 RMST_6.1-201ENST00000611980 203 ntBASIC2.95□□□□□ -1.94
COL20A1Q9P218 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
COL20A1Q9P218 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.95□□□□□ -1.94
COL20A1Q9P218 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL20A1Q9P218 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.95□□□□□ -1.94
COL20A1Q9P218 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.95□□□□□ -1.94
COL20A1Q9P218 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.94□□□□□ -1.94
COL20A1Q9P218 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL20A1Q9P218 MIR625-201ENST00000385047 85 ntBASIC2.94□□□□□ -1.94
COL20A1Q9P218 SNORA12.2-201ENST00000391040 156 ntBASIC2.94□□□□□ -1.94
COL20A1Q9P218 AL590556.1-201ENST00000423231 483 ntBASIC2.94□□□□□ -1.94
COL20A1Q9P218 AC008267.5-201ENST00000424928 265 ntBASIC2.94□□□□□ -1.94
COL20A1Q9P218 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.94□□□□□ -1.94
COL20A1Q9P218 AC080013.2-201ENST00000460866 323 ntBASIC2.94□□□□□ -1.94
COL20A1Q9P218 SNORA31.16-201ENST00000516773 139 ntBASIC2.94□□□□□ -1.94
COL20A1Q9P218 RNU7-4P-201ENST00000516961 62 ntBASIC2.94□□□□□ -1.94
COL20A1Q9P218 RNU6-699P-201ENST00000517081 110 ntBASIC2.94□□□□□ -1.94
COL20A1Q9P218 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.94□□□□□ -1.94
COL20A1Q9P218 CYP4A27P-201ENST00000567218 190 ntBASIC2.94□□□□□ -1.94
COL20A1Q9P218 RPL30P11-203ENST00000598995 310 ntBASIC2.94□□□□□ -1.94
COL20A1Q9P218 Z98751.3-201ENST00000604447 521 ntBASIC2.94□□□□□ -1.94
COL20A1Q9P218 AC007742.2-201ENST00000618226 398 ntBASIC2.94□□□□□ -1.94
COL20A1Q9P218 uc_338.22-201ENST00000622722 187 ntBASIC2.94□□□□□ -1.94
COL20A1Q9P218 AL450472.1-202ENST00000637286 180 ntBASIC2.94□□□□□ -1.94
COL20A1Q9P218 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
COL20A1Q9P218 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms