Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MIR4448-201ENST00000584360 86 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 AC009229.3-201ENST00000608056 282 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 uc_338.14-201ENST00000613162 166 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 MIR6132-201ENST00000622083 109 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.14□□□□□ -2.07
NDE1Q9NXR1 AC099654.5-201ENST00000636479 350 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
NDE1Q9NXR1 AL359854.1-201ENST00000614203 1594 ntBASIC2.14□□□□□ -2.07
NDE1Q9NXR1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.14□□□□□ -2.07
NDE1Q9NXR1 Z75746.1-201ENST00000440243 2080 ntBASIC2.13□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.48-201ENST00000362710 103 ntBASIC2.13□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.123-201ENST00000363338 102 ntBASIC2.13□□□□□ -2.07
NDE1Q9NXR1 SNORA38-201ENST00000363946 132 ntBASIC2.13□□□□□ -2.07
NDE1Q9NXR1 SNORD32A-201ENST00000364805 84 ntBASIC2.13□□□□□ -2.07
NDE1Q9NXR1 RNU6-487P-201ENST00000365430 104 ntBASIC2.13□□□□□ -2.07
NDE1Q9NXR1 RNU6-1083P-201ENST00000384022 107 ntBASIC2.13□□□□□ -2.07
NDE1Q9NXR1 MT-TD-201ENST00000387419 68 ntBASIC2.13□□□□□ -2.07
NDE1Q9NXR1 NCOR1P3-201ENST00000420479 303 ntBASIC2.13□□□□□ -2.07
NDE1Q9NXR1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.13□□□□□ -2.07
NDE1Q9NXR1 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.13□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.632-201ENST00000459189 102 ntBASIC2.13□□□□□ -2.07
NDE1Q9NXR1 AC090515.1-201ENST00000465295 476 ntBASIC2.13□□□□□ -2.07
NDE1Q9NXR1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.13□□□□□ -2.07
NDE1Q9NXR1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.13□□□□□ -2.07
NDE1Q9NXR1 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.13□□□□□ -2.07
NDE1Q9NXR1 AC109446.1-201ENST00000566172 220 ntBASIC2.13□□□□□ -2.07
NDE1Q9NXR1 MIR3199-1-201ENST00000582434 88 ntBASIC2.13□□□□□ -2.07
NDE1Q9NXR1 MIR4435-1-201ENST00000582552 80 ntBASIC2.13□□□□□ -2.07
NDE1Q9NXR1 AC011494.1-201ENST00000596454 237 ntBASIC2.13□□□□□ -2.07
NDE1Q9NXR1 AC018462.2-201ENST00000605375 395 ntBASIC2.13□□□□□ -2.07
NDE1Q9NXR1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.13□□□□□ -2.07
NDE1Q9NXR1 HAUS6P2-201ENST00000433254 2404 ntBASIC2.13□□□□□ -2.07
NDE1Q9NXR1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
NDE1Q9NXR1 AC009541.1-201ENST00000438279 2662 ntBASIC2.13□□□□□ -2.07
NDE1Q9NXR1 AL359851.1-201ENST00000569460 4997 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
NDE1Q9NXR1 MTND4P29-201ENST00000503122 1372 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 KPNA2P1-201ENST00000458289 1591 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 RNU6-227P-201ENST00000362865 103 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 RNU6-797P-201ENST00000363101 109 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.404-201ENST00000383978 102 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 SNORA36A-201ENST00000384221 132 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.482-201ENST00000384377 111 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.509-201ENST00000384506 99 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 SNORD116-29-201ENST00000384516 83 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 SNORA67.4-201ENST00000384688 142 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
NDE1Q9NXR1 SNORD23.1-201ENST00000408212 104 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 RNU6-1050P-201ENST00000410388 107 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.12□□□□□ -2.07
NDE1Q9NXR1 AC063976.3-201ENST00000426849 329 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.12□□□□□ -2.07
NDE1Q9NXR1 AC124916.1-201ENST00000444020 547 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.12□□□□□ -2.07
NDE1Q9NXR1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.12□□□□□ -2.07
NDE1Q9NXR1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.12□□□□□ -2.07
NDE1Q9NXR1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.12□□□□□ -2.07
NDE1Q9NXR1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.12□□□□□ -2.07
NDE1Q9NXR1 RNA5SP356-201ENST00000515972 94 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 SCARNA11.3-201ENST00000517276 130 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.12□□□□□ -2.07
NDE1Q9NXR1 GTF3AP2-201ENST00000557014 266 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 AL033523.1-201ENST00000605153 153 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.12□□□□□ -2.07
NDE1Q9NXR1 IGHVIII-44-202ENST00000636235 289 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 AL669831.3-213ENST00000636676 183 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 AL136360.1-201ENST00000503377 1900 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NDE1Q9NXR1 ZNF658B-202ENST00000615961 3375 ntBASIC2.12□□□□□ -2.07
NDE1Q9NXR1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NDE1Q9NXR1 AC080128.1-201ENST00000474389 1917 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
NDE1Q9NXR1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.11□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.61-201ENST00000362835 102 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 SNORD114-19-201ENST00000363072 75 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 SNORA16B-201ENST00000364674 135 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.384-201ENST00000383909 102 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.387-201ENST00000383918 102 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.504-201ENST00000384481 104 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 RNU6-331P-201ENST00000384724 107 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 SNORA75.4-201ENST00000391278 119 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 BTF3L4P2-201ENST00000392798 346 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 RNA5SP390-201ENST00000410191 113 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 AP000275.1-201ENST00000411943 390 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 AL356379.1-201ENST00000414105 126 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.11□□□□□ -2.07
NDE1Q9NXR1 OOSP1P1-201ENST00000423265 274 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 RPL30P4-201ENST00000429309 333 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.11□□□□□ -2.07
NDE1Q9NXR1 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 DAP3P1-201ENST00000441522 278 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.11□□□□□ -2.07
NDE1Q9NXR1 SNORD5.1-201ENST00000458800 75 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 AC234781.5-201ENST00000508429 271 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 ACA59.1-201ENST00000515966 143 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 RNA5SP200-201ENST00000516360 103 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 RNA5SP384-201ENST00000516615 116 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 AC079598.5-201ENST00000547460 117 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 HSPE1P4-201ENST00000550617 308 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms