Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 FER-210ENST00000628534 558 ntTSL 5 BASIC1.49□□□□□ -2.17
CCL28Q9NRJ3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CCL28Q9NRJ3 KPNA2P1-201ENST00000458289 1591 ntBASIC1.49□□□□□ -2.17
CCL28Q9NRJ3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 SNORD48-201ENST00000364953 64 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 RNU6-214P-201ENST00000384130 107 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 MIR597-201ENST00000384968 97 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 AL079342.1-201ENST00000401460 267 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 AL158823.1-201ENST00000418441 478 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 AL445685.2-201ENST00000422551 342 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 MTCO1P20-201ENST00000425366 358 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 UBE2V1P4-201ENST00000425374 344 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 MRPS10P2-201ENST00000431226 381 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 AL139415.2-201ENST00000431968 163 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 HMGN2P3-201ENST00000433603 273 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 HMGN2P5-201ENST00000436882 273 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 RPL9P9-202ENST00000466501 579 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 RNU6-314P-201ENST00000516574 104 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 EIF4A1P12-201ENST00000551910 141 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 AC109446.1-201ENST00000566172 220 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 AC100830.2-201ENST00000581636 240 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 AC010525.2-201ENST00000590920 195 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 AC005520.5-201ENST00000613926 164 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 MIR1321-201ENST00000637766 79 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
CCL28Q9NRJ3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 RNU6-451P-201ENST00000362921 107 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 RNY3P3-201ENST00000363816 102 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 RNU4-40P-201ENST00000364351 143 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 RNU6-1317P-201ENST00000364582 104 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 RNU6-378P-201ENST00000384324 107 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 RNU6-160P-201ENST00000384591 107 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 RNU11-3P-201ENST00000391111 133 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AL590002.1-201ENST00000406554 418 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 SNORA3.2-201ENST00000408221 125 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AL030996.1-201ENST00000411430 235 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AC012306.1-201ENST00000423267 114 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 MTND3P9-201ENST00000429526 346 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AC003989.2-201ENST00000440224 169 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 FTH1P25-201ENST00000447665 469 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 PMCHL2-203ENST00000457791 237 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AC007547.1-201ENST00000462177 490 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AC083904.1-201ENST00000487828 231 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AC114801.2-201ENST00000503825 781 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AC021146.2-201ENST00000504736 556 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AC005741.1-201ENST00000511094 432 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AC092436.3-201ENST00000511788 257 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AC107393.1-201ENST00000512403 346 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 Y_RNA.665-201ENST00000516177 98 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AP005660.1-201ENST00000522972 293 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 MIR4299-201ENST00000577899 72 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 MIR3618-201ENST00000580330 88 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AC008749.1-201ENST00000597650 306 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AC243960.4-201ENST00000600532 288 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AC005034.5-201ENST00000604219 466 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AC025754.2-201ENST00000606491 432 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AC009994.1-201ENST00000606889 253 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AL022345.1-201ENST00000607292 135 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AL627230.6-201ENST00000611129 280 ntBASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CCL28Q9NRJ3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 Y_RNA.332-201ENST00000365271 113 ntBASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 MIR181A1-201ENST00000385026 110 ntBASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 MIR208B-201ENST00000401172 77 ntBASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 RNU4-26P-201ENST00000410270 107 ntBASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 AL139413.1-201ENST00000421309 217 ntBASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 HMGN2P18-201ENST00000450680 270 ntBASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 AMD1P1-201ENST00000457220 922 ntBASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 HMGN2P26-201ENST00000463169 339 ntBASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 MTCO1P29-201ENST00000496868 288 ntBASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 RNU6-1332P-201ENST00000516666 104 ntBASIC1.46□□□□□ -2.18
CCL28Q9NRJ3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms