Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 RNU6-799P-201ENST00000363567 107 ntBASIC3.12□□□□□ -1.91
MSL2Q9HCI7 Y_RNA.415-201ENST00000384012 112 ntBASIC3.12□□□□□ -1.91
MSL2Q9HCI7 RNU6-793P-201ENST00000384233 104 ntBASIC3.12□□□□□ -1.91
MSL2Q9HCI7 RNU6-622P-201ENST00000384272 103 ntBASIC3.12□□□□□ -1.91
MSL2Q9HCI7 SNORA46.1-201ENST00000391069 153 ntBASIC3.12□□□□□ -1.91
MSL2Q9HCI7 U3.26-201ENST00000391236 204 ntBASIC3.12□□□□□ -1.91
MSL2Q9HCI7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.12□□□□□ -1.91
MSL2Q9HCI7 PTGES3P4-201ENST00000426243 356 ntBASIC3.12□□□□□ -1.91
MSL2Q9HCI7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.12□□□□□ -1.91
MSL2Q9HCI7 AL133547.1-201ENST00000448546 220 ntBASIC3.12□□□□□ -1.91
MSL2Q9HCI7 AC091021.1-201ENST00000468051 388 ntBASIC3.12□□□□□ -1.91
MSL2Q9HCI7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.12□□□□□ -1.91
MSL2Q9HCI7 AL121594.1-201ENST00000475906 575 ntBASIC3.12□□□□□ -1.91
MSL2Q9HCI7 HMGB3P3-201ENST00000510526 400 ntBASIC3.12□□□□□ -1.91
MSL2Q9HCI7 RNU1-95P-201ENST00000516357 160 ntBASIC3.12□□□□□ -1.91
MSL2Q9HCI7 RNU1-128P-201ENST00000516704 160 ntBASIC3.12□□□□□ -1.91
MSL2Q9HCI7 MTND5P41-201ENST00000517498 206 ntBASIC3.12□□□□□ -1.91
MSL2Q9HCI7 CKS1BP7-201ENST00000522230 235 ntBASIC3.12□□□□□ -1.91
MSL2Q9HCI7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.12□□□□□ -1.91
MSL2Q9HCI7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.12□□□□□ -1.91
MSL2Q9HCI7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
MSL2Q9HCI7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.12□□□□□ -1.91
MSL2Q9HCI7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
MSL2Q9HCI7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.12□□□□□ -1.91
MSL2Q9HCI7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.12□□□□□ -1.91
MSL2Q9HCI7 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
MSL2Q9HCI7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.12□□□□□ -1.91
MSL2Q9HCI7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
MSL2Q9HCI7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.12□□□□□ -1.91
MSL2Q9HCI7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.12□□□□□ -1.91
MSL2Q9HCI7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
MSL2Q9HCI7 SNORD87-201ENST00000364849 89 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
MSL2Q9HCI7 SNORA5A-201ENST00000384111 134 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 PTMAP2-201ENST00000397627 327 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 CBX3P9-201ENST00000402326 552 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 RN7SKP53-201ENST00000411337 315 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 AC023141.4-201ENST00000412031 328 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 AC078809.1-201ENST00000427601 140 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 AC027124.2-201ENST00000428249 105 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 AP002884.2-201ENST00000471647 395 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 AIG1P1-201ENST00000503376 148 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.11□□□□□ -1.91
MSL2Q9HCI7 AC104619.4-201ENST00000510773 249 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 RN7SKP83-201ENST00000516512 178 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 SNORA27.4-201ENST00000516650 95 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 HIGD1AP1-201ENST00000550979 275 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 AL356157.2-201ENST00000605122 111 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.11□□□□□ -1.91
MSL2Q9HCI7 AC069200.1-201ENST00000609511 323 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 AC018692.3-201ENST00000623929 123 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 AL034408.1-202ENST00000636088 415 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 AC012442.3-202ENST00000636742 206 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
MSL2Q9HCI7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
MSL2Q9HCI7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.11□□□□□ -1.91
MSL2Q9HCI7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.11□□□□□ -1.91
MSL2Q9HCI7 AC007656.2-201ENST00000624902 4547 ntBASIC3.11□□□□□ -1.91
MSL2Q9HCI7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MSL2Q9HCI7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
MSL2Q9HCI7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
MSL2Q9HCI7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.1□□□□□ -1.91
MSL2Q9HCI7 AL359854.1-201ENST00000614203 1594 ntBASIC3.1□□□□□ -1.91
MSL2Q9HCI7 Y_RNA.40-201ENST00000362645 93 ntBASIC3.1□□□□□ -1.91
MSL2Q9HCI7 RNU6-529P-201ENST00000363383 104 ntBASIC3.1□□□□□ -1.91
MSL2Q9HCI7 Y_RNA.170-201ENST00000363746 110 ntBASIC3.1□□□□□ -1.91
MSL2Q9HCI7 Y_RNA.230-201ENST00000364348 109 ntBASIC3.1□□□□□ -1.91
MSL2Q9HCI7 Y_RNA.233-201ENST00000364407 101 ntBASIC3.1□□□□□ -1.91
MSL2Q9HCI7 RNU6-198P-201ENST00000384258 104 ntBASIC3.1□□□□□ -1.91
MSL2Q9HCI7 AC010099.1-201ENST00000455434 375 ntBASIC3.1□□□□□ -1.91
MSL2Q9HCI7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.1□□□□□ -1.91
MSL2Q9HCI7 AP001324.2-201ENST00000461163 319 ntBASIC3.1□□□□□ -1.91
MSL2Q9HCI7 AC112771.1-201ENST00000463581 102 ntBASIC3.1□□□□□ -1.91
MSL2Q9HCI7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.1□□□□□ -1.91
MSL2Q9HCI7 RN7SKP18-201ENST00000516005 275 ntBASIC3.1□□□□□ -1.91
MSL2Q9HCI7 RNU5F-2P-201ENST00000516066 82 ntBASIC3.1□□□□□ -1.91
MSL2Q9HCI7 RNU1-61P-201ENST00000516107 151 ntBASIC3.1□□□□□ -1.91
MSL2Q9HCI7 RNU6-1219P-201ENST00000516143 112 ntBASIC3.1□□□□□ -1.91
MSL2Q9HCI7 RNA5SP54-201ENST00000516951 92 ntBASIC3.1□□□□□ -1.91
MSL2Q9HCI7 AP002001.1-203ENST00000534002 267 ntBASIC3.1□□□□□ -1.91
MSL2Q9HCI7 AC016256.1-201ENST00000547971 354 ntBASIC3.1□□□□□ -1.91
MSL2Q9HCI7 AC011471.1-201ENST00000585766 187 ntBASIC3.1□□□□□ -1.91
MSL2Q9HCI7 AL034555.1-201ENST00000604816 211 ntBASIC3.1□□□□□ -1.91
MSL2Q9HCI7 AC006133.1-201ENST00000617106 264 ntBASIC3.1□□□□□ -1.91
MSL2Q9HCI7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.1□□□□□ -1.91
MSL2Q9HCI7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MSL2Q9HCI7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.1□□□□□ -1.91
MSL2Q9HCI7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MSL2Q9HCI7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
MSL2Q9HCI7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
MSL2Q9HCI7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
MSL2Q9HCI7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
MSL2Q9HCI7 snoU2_19.1-201ENST00000362361 80 ntBASIC3.09□□□□□ -1.91
MSL2Q9HCI7 Y_RNA.464-201ENST00000384282 110 ntBASIC3.09□□□□□ -1.91
MSL2Q9HCI7 MIR200C-201ENST00000384980 68 ntBASIC3.09□□□□□ -1.91
MSL2Q9HCI7 MIR186-201ENST00000384988 86 ntBASIC3.09□□□□□ -1.91
MSL2Q9HCI7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.09□□□□□ -1.91
MSL2Q9HCI7 ATP5A1P2-201ENST00000412323 255 ntBASIC3.09□□□□□ -1.91
MSL2Q9HCI7 AL390729.2-201ENST00000416137 156 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms