Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
EBF3Q9H4W6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
EBF3Q9H4W6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
EBF3Q9H4W6 CUL1P1-201ENST00000509510 2425 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
EBF3Q9H4W6 RNU6-200P-201ENST00000364743 107 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 RNU6-827P-201ENST00000365553 106 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 RNU6-611P-201ENST00000384276 104 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 RNU6-166P-201ENST00000384371 107 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 RNU6-140P-201ENST00000384566 108 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 MIR34A-201ENST00000385130 110 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 MIR325-201ENST00000385260 98 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 RNU1-101P-201ENST00000391171 127 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 Y_RNA.592-201ENST00000410274 109 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 RNA5SP494-201ENST00000410653 129 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 AC098614.2-201ENST00000426040 255 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 AL512844.2-201ENST00000433990 593 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 MTND5P15-201ENST00000434246 349 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.88□□□□□ -1.95
EBF3Q9H4W6 TRBVB-201ENST00000477100 408 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 RPS27AP9-201ENST00000477681 438 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.88□□□□□ -1.95
EBF3Q9H4W6 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.88□□□□□ -1.95
EBF3Q9H4W6 RNU6-703P-201ENST00000516946 107 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.88□□□□□ -1.95
EBF3Q9H4W6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.88□□□□□ -1.95
EBF3Q9H4W6 AL390123.1-201ENST00000603216 237 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 FTX_3.1-201ENST00000610451 147 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 AC068831.7-201ENST00000616954 363 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 AL161431.1-201ENST00000618966 4205 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
EBF3Q9H4W6 ZNF299P-201ENST00000406845 1804 ntBASIC2.88□□□□□ -1.95
EBF3Q9H4W6 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
EBF3Q9H4W6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
EBF3Q9H4W6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.87□□□□□ -1.95
EBF3Q9H4W6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
EBF3Q9H4W6 Y_RNA.84-201ENST00000363011 104 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 Y_RNA.117-201ENST00000363294 101 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 RNU6-338P-201ENST00000383888 105 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 Y_RNA.462-201ENST00000384268 102 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 MIR521-1-201ENST00000384902 87 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 AL117339.3-201ENST00000418733 162 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 AL078601.1-201ENST00000444542 271 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 AC079354.2-201ENST00000453523 154 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 AC092798.1-201ENST00000458542 409 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 RNU6-1037P-201ENST00000459571 107 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.87□□□□□ -1.95
EBF3Q9H4W6 RN7SKP282-201ENST00000516824 299 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 RNU6-711P-201ENST00000517255 106 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 AC144568.1-201ENST00000520139 137 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.87□□□□□ -1.95
EBF3Q9H4W6 AC103996.1-201ENST00000555468 102 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 AMZ2P1-203ENST00000565833 850 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 AC008962.1-201ENST00000605729 304 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 AC098479.1-201ENST00000609225 154 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 AC137590.2-201ENST00000619709 240 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 AC006111.3-201ENST00000622137 383 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.87□□□□□ -1.95
EBF3Q9H4W6 AC027309.3-201ENST00000623419 351 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
EBF3Q9H4W6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
EBF3Q9H4W6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
EBF3Q9H4W6 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
EBF3Q9H4W6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
EBF3Q9H4W6 MTND5P9-201ENST00000503854 1755 ntBASIC2.87□□□□□ -1.95
EBF3Q9H4W6 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
EBF3Q9H4W6 Y_RNA.20-201ENST00000362479 113 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 RNU6-859P-201ENST00000362728 107 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 snoU2_19.2-201ENST00000363024 80 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 Y_RNA.183-201ENST00000363882 113 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 SNORD27-201ENST00000363981 72 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 Y_RNA.416-201ENST00000384014 113 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 RNU6-933P-201ENST00000384424 107 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 Y_RNA.515-201ENST00000384535 112 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
EBF3Q9H4W6 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.86□□□□□ -1.95
EBF3Q9H4W6 RNU6-1077P-201ENST00000410506 102 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 RNU6-1203P-201ENST00000410703 110 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 RNU2-25P-201ENST00000411041 191 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
EBF3Q9H4W6 MTCO3P29-201ENST00000432119 779 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.86□□□□□ -1.95
EBF3Q9H4W6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
EBF3Q9H4W6 RNA5SP310-201ENST00000459084 116 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 AC133134.1-201ENST00000466800 359 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 RPL23AP45-201ENST00000476406 468 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 RN7SL297P-201ENST00000483161 293 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 AC010469.2-201ENST00000496412 480 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.86□□□□□ -1.95
EBF3Q9H4W6 RNU6-572P-201ENST00000516724 80 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.86□□□□□ -1.95
EBF3Q9H4W6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.86□□□□□ -1.95
EBF3Q9H4W6 AC130289.1-201ENST00000577321 73 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.86□□□□□ -1.95
EBF3Q9H4W6 MIR6076-201ENST00000617521 113 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.86□□□□□ -1.95
EBF3Q9H4W6 U2.22-201ENST00000636441 106 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 U2.21-201ENST00000637295 81 ntBASIC2.86□□□□□ -1.95
EBF3Q9H4W6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms