Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 CUL1P1-201ENST00000509510 2425 ntBASIC3.15□□□□□ -1.9
SSBP3Q9BWW4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SSBP3Q9BWW4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
SSBP3Q9BWW4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SSBP3Q9BWW4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 RNU6-899P-201ENST00000363947 107 ntBASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 MIR23B-201ENST00000384832 97 ntBASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 RNU6-763P-201ENST00000390865 106 ntBASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 SNORA26.3-201ENST00000391119 136 ntBASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 RNU6-381P-201ENST00000391259 108 ntBASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 MIR888-201ENST00000401186 77 ntBASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 NDUFS5P4-201ENST00000412983 318 ntBASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 AC019205.3-201ENST00000424573 156 ntBASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 AL133162.1-201ENST00000463228 453 ntBASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 SCARNA14-201ENST00000516903 136 ntBASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 AC021269.2-201ENST00000532318 330 ntBASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 AC022616.8-201ENST00000533569 253 ntBASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 AC090616.3-201ENST00000582184 217 ntBASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 MIR5187-201ENST00000583479 76 ntBASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 MIR3158-1-201ENST00000583596 81 ntBASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 AL078604.3-201ENST00000615580 211 ntBASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 UBE3AP2-201ENST00000429033 2259 ntBASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 FAM35BP-202ENST00000497389 3337 ntBASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SSBP3Q9BWW4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 RNU1-62P-201ENST00000362599 164 ntBASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 RNU6-884P-201ENST00000363889 107 ntBASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 RNU6-153P-201ENST00000364422 104 ntBASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 SNORA18.3-201ENST00000384122 132 ntBASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 RNU6-80P-201ENST00000384195 107 ntBASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 MIR493-201ENST00000385254 89 ntBASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 RNA5SP390-201ENST00000410191 113 ntBASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 RHEBP3-201ENST00000411920 351 ntBASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 AC096649.2-201ENST00000416186 393 ntBASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 AC017083.1-201ENST00000428093 483 ntBASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 U8.19-201ENST00000459095 133 ntBASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 SNORA67.7-201ENST00000516664 135 ntBASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 AC115990.1-201ENST00000526957 301 ntBASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 DEFB131C-201ENST00000528817 165 ntBASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 NACAP3-201ENST00000552100 481 ntBASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 AL451007.1-201ENST00000595491 289 ntBASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 SNRPGP20-201ENST00000604477 205 ntBASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 AC069294.1-201ENST00000608397 350 ntBASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 AL121772.2-201ENST00000614331 297 ntBASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 AC039056.2-201ENST00000622261 511 ntBASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.14□□□□□ -1.91
SSBP3Q9BWW4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 RNA5SP124-201ENST00000362739 110 ntBASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 RNU6-727P-201ENST00000363592 107 ntBASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 SNORA7.2-201ENST00000364446 145 ntBASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 Y_RNA.337-201ENST00000365312 102 ntBASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 SNORA20-201ENST00000384662 132 ntBASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 SNORA8.3-201ENST00000384679 139 ntBASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 U8.11-201ENST00000384699 133 ntBASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 U8.12-201ENST00000384701 133 ntBASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 RPL21P66-201ENST00000426566 466 ntBASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 NDUFB4P6-201ENST00000436819 366 ntBASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 U8.18-201ENST00000459285 133 ntBASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 AC078918.1-201ENST00000498515 228 ntBASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 AC023141.12-201ENST00000512399 199 ntBASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 RNU6-436P-201ENST00000516171 114 ntBASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 Y_RNA.686-201ENST00000516548 134 ntBASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 TUG1_4.1-201ENST00000619464 181 ntBASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SSBP3Q9BWW4 AL133383.2-201ENST00000622958 2336 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms