Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL450472.1-202ENST00000637286 180 ntBASIC1.93□□□□□ -2.1
SSX3Q99909 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.93□□□□□ -2.1
SSX3Q99909 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
SSX3Q99909 Y_RNA.100-201ENST00000363141 102 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 SNORD32B-201ENST00000364460 84 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 RNU6-534P-201ENST00000364877 106 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 SNORA36A-201ENST00000384221 132 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 MIR29C-201ENST00000385231 88 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SSX3Q99909 RNU11-3P-201ENST00000391111 133 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 MTCYBP2-201ENST00000407745 171 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 MIR548F1-201ENST00000408667 84 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 AL030996.1-201ENST00000411430 235 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 VN1R36P-201ENST00000414936 291 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 EIF1AXP1-201ENST00000419267 435 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 HMGN2P3-201ENST00000433603 273 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 HMGN2P5-201ENST00000436882 273 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 AC245102.2-201ENST00000448956 180 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.92□□□□□ -2.1
SSX3Q99909 AC132942.1-201ENST00000486753 483 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.92□□□□□ -2.1
SSX3Q99909 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.92□□□□□ -2.1
SSX3Q99909 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.92□□□□□ -2.1
SSX3Q99909 PTP4A1P4-201ENST00000512479 322 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 MIR449C-201ENST00000516047 92 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.92□□□□□ -2.1
SSX3Q99909 AC109446.1-201ENST00000566172 220 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 CYP4A27P-201ENST00000567218 190 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.92□□□□□ -2.1
SSX3Q99909 AC068790.6-201ENST00000602558 258 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 AC046143.2-201ENST00000609789 160 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.92□□□□□ -2.1
SSX3Q99909 MIR1248-201ENST00000629190 106 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 AC073869.6-201ENST00000640656 341 ntBASIC1.92□□□□□ -2.1
SSX3Q99909 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SSX3Q99909 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SSX3Q99909 SNORD14D-201ENST00000384390 87 ntBASIC1.91□□□□□ -2.1
SSX3Q99909 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SSX3Q99909 MIR1283-2-201ENST00000408621 87 ntBASIC1.91□□□□□ -2.1
SSX3Q99909 RNA5SP201-201ENST00000410316 124 ntBASIC1.91□□□□□ -2.1
SSX3Q99909 SRIP3-201ENST00000413200 219 ntBASIC1.91□□□□□ -2.1
SSX3Q99909 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.91□□□□□ -2.1
SSX3Q99909 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.91□□□□□ -2.1
SSX3Q99909 UBE2V1P8-201ENST00000437166 265 ntBASIC1.91□□□□□ -2.1
SSX3Q99909 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.91□□□□□ -2.1
SSX3Q99909 FAM206BP-201ENST00000510179 541 ntBASIC1.91□□□□□ -2.1
SSX3Q99909 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.91□□□□□ -2.1
SSX3Q99909 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.91□□□□□ -2.1
SSX3Q99909 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.91□□□□□ -2.1
SSX3Q99909 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.91□□□□□ -2.1
SSX3Q99909 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.91□□□□□ -2.1
SSX3Q99909 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.91□□□□□ -2.1
SSX3Q99909 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.91□□□□□ -2.1
SSX3Q99909 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.91□□□□□ -2.1
SSX3Q99909 AC103810.6-201ENST00000606708 136 ntBASIC1.91□□□□□ -2.1
SSX3Q99909 AC091932.3-201ENST00000624223 323 ntBASIC1.91□□□□□ -2.1
SSX3Q99909 MIR3688-2-201ENST00000636963 87 ntBASIC1.91□□□□□ -2.1
SSX3Q99909 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
SSX3Q99909 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SSX3Q99909 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SSX3Q99909 U3.9-201ENST00000363823 204 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 RNU6-26P-201ENST00000383985 107 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 MIR521-1-201ENST00000384902 87 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 MIR597-201ENST00000384968 97 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 AL356432.1-201ENST00000405809 419 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.9□□□□□ -2.11
SSX3Q99909 AL135786.1-201ENST00000415892 214 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.9□□□□□ -2.11
SSX3Q99909 ZNF885P-201ENST00000420174 1098 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 AC244636.1-201ENST00000421152 228 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 AC012306.1-201ENST00000423267 114 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 MTCO3P18-201ENST00000440206 761 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.9□□□□□ -2.11
SSX3Q99909 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SSX3Q99909 RNU7-66P-201ENST00000459469 62 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 AC092989.1-201ENST00000481235 277 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 AC104435.1-201ENST00000483483 166 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 AC021146.2-201ENST00000504736 556 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 ANXA2P1-201ENST00000505539 926 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 AC093259.1-201ENST00000509755 300 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 AC096745.1-201ENST00000509945 370 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 RNU6-718P-201ENST00000516166 105 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 RNU6-991P-201ENST00000516168 107 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 RNA5SP281-201ENST00000516504 135 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.9□□□□□ -2.11
SSX3Q99909 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.9□□□□□ -2.11
SSX3Q99909 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.9□□□□□ -2.11
SSX3Q99909 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.9□□□□□ -2.11
SSX3Q99909 AC146944.4-201ENST00000602697 718 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 AC067747.1-201ENST00000608026 250 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 PCGEM1.1-201ENST00000613431 131 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 AC005296.1-201ENST00000616145 209 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 AL136221.1-201ENST00000621449 509 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 AC090617.10-201ENST00000624308 134 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 MIR3662-201ENST00000637030 95 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.11
SSX3Q99909 AC027514.1-201ENST00000588561 1603 ntBASIC1.9□□□□□ -2.11
SSX3Q99909 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
SSX3Q99909 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
SSX3Q99909 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms