Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AC005000.2-201ENST00000605468 310 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 AC005296.1-201ENST00000616145 209 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.94□□□□□ -1.94
TIMP4Q99727 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
TIMP4Q99727 AL353743.1-202ENST00000431724 1695 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.94□□□□□ -1.94
TIMP4Q99727 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.94□□□□□ -1.94
TIMP4Q99727 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.94□□□□□ -1.94
TIMP4Q99727 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.94□□□□□ -1.94
TIMP4Q99727 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TIMP4Q99727 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
TIMP4Q99727 ADAM3A-203ENST00000461344 2157 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 MAPK10-322ENST00000641485 4530 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 Y_RNA.117-201ENST00000363294 101 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 SNORD115-32-201ENST00000364079 82 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 RNU6-270P-201ENST00000364131 105 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 Y_RNA.269-201ENST00000364685 89 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 SNORA36A-201ENST00000384221 132 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 SNORA48.2-201ENST00000390926 124 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 RPL21P3-201ENST00000395517 478 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 NDUFS5P4-201ENST00000412983 318 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.93□□□□□ -1.94
TIMP4Q99727 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.93□□□□□ -1.94
TIMP4Q99727 PIGPP3-201ENST00000425307 415 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 PRELID3BP1-201ENST00000457142 540 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 AC146507.2-201ENST00000460608 476 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 AP002884.2-201ENST00000471647 395 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 AC109925.1-201ENST00000478069 331 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 AC097462.2-201ENST00000504623 481 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 AC006445.2-201ENST00000510061 472 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.93□□□□□ -1.94
TIMP4Q99727 RNU6-182P-201ENST00000516970 105 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 AC245166.1-201ENST00000521012 253 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 RRN3P3-201ENST00000549207 578 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.93□□□□□ -1.94
TIMP4Q99727 UBL5P4-201ENST00000562584 236 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.93□□□□□ -1.94
TIMP4Q99727 AC130289.1-201ENST00000577321 73 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 MIR5695-201ENST00000579717 85 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 SNORA43.4-201ENST00000629559 138 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.93□□□□□ -1.94
TIMP4Q99727 AC093831.2-201ENST00000624393 3427 ntBASIC2.93□□□□□ -1.94
TIMP4Q99727 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TIMP4Q99727 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
TIMP4Q99727 AC022336.2-201ENST00000568966 2538 ntBASIC2.92□□□□□ -1.94
TIMP4Q99727 RNA5SP374-201ENST00000362939 125 ntBASIC2.92□□□□□ -1.94
TIMP4Q99727 RNU6-280P-201ENST00000364145 104 ntBASIC2.92□□□□□ -1.94
TIMP4Q99727 Y_RNA.581-201ENST00000391017 97 ntBASIC2.92□□□□□ -1.94
TIMP4Q99727 RPS4XP3-201ENST00000398541 413 ntBASIC2.92□□□□□ -1.94
TIMP4Q99727 SNORD12B-201ENST00000410433 91 ntBASIC2.92□□□□□ -1.94
TIMP4Q99727 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.92□□□□□ -1.94
TIMP4Q99727 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.92□□□□□ -1.94
TIMP4Q99727 RPL30P12-201ENST00000474666 353 ntBASIC2.92□□□□□ -1.94
TIMP4Q99727 RPS29P2-201ENST00000479278 136 ntBASIC2.92□□□□□ -1.94
TIMP4Q99727 SNORA31.23-201ENST00000517219 133 ntBASIC2.92□□□□□ -1.94
TIMP4Q99727 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.92□□□□□ -1.94
TIMP4Q99727 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.92□□□□□ -1.94
TIMP4Q99727 AC009779.6-201ENST00000603972 165 ntBASIC2.92□□□□□ -1.94
TIMP4Q99727 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.92□□□□□ -1.94
TIMP4Q99727 AC073308.1-201ENST00000623696 305 ntBASIC2.92□□□□□ -1.94
TIMP4Q99727 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.92□□□□□ -1.94
TIMP4Q99727 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TIMP4Q99727 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TIMP4Q99727 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TIMP4Q99727 MAPK10-362ENST00000641864 4484 ntBASIC2.91□□□□□ -1.94
TIMP4Q99727 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.91□□□□□ -1.94
TIMP4Q99727 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TIMP4Q99727 RNU5B-2P-201ENST00000363036 113 ntBASIC2.91□□□□□ -1.94
TIMP4Q99727 Y_RNA.319-201ENST00000365138 92 ntBASIC2.91□□□□□ -1.94
TIMP4Q99727 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
TIMP4Q99727 RNU4-30P-201ENST00000410245 143 ntBASIC2.91□□□□□ -1.94
TIMP4Q99727 Z92545.1-201ENST00000411782 234 ntBASIC2.91□□□□□ -1.94
TIMP4Q99727 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.91□□□□□ -1.94
TIMP4Q99727 TRIAP1P1-201ENST00000427062 225 ntBASIC2.91□□□□□ -1.94
TIMP4Q99727 snoU13.6-201ENST00000458785 104 ntBASIC2.91□□□□□ -1.94
TIMP4Q99727 MED28P2-201ENST00000475771 317 ntBASIC2.91□□□□□ -1.94
TIMP4Q99727 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.91□□□□□ -1.94
TIMP4Q99727 RNA5SP217-201ENST00000515959 91 ntBASIC2.91□□□□□ -1.94
TIMP4Q99727 RNU6-1114P-201ENST00000516022 107 ntBASIC2.91□□□□□ -1.94
TIMP4Q99727 RNU6-496P-201ENST00000516145 99 ntBASIC2.91□□□□□ -1.94
TIMP4Q99727 SNORA81.3-201ENST00000517283 198 ntBASIC2.91□□□□□ -1.94
TIMP4Q99727 AC022080.3-201ENST00000544433 482 ntBASIC2.91□□□□□ -1.94
TIMP4Q99727 NACAP3-201ENST00000552100 481 ntBASIC2.91□□□□□ -1.94
TIMP4Q99727 AC021739.1-201ENST00000559631 174 ntBASIC2.91□□□□□ -1.94
TIMP4Q99727 AC009163.5-201ENST00000575421 637 ntBASIC2.91□□□□□ -1.94
TIMP4Q99727 AC098479.1-201ENST00000609225 154 ntBASIC2.91□□□□□ -1.94
TIMP4Q99727 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.91□□□□□ -1.94
TIMP4Q99727 AC093010.3-201ENST00000570269 15214 ntBASIC2.91□□□□□ -1.94
TIMP4Q99727 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.91□□□□□ -1.94
TIMP4Q99727 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.91□□□□□ -1.94
TIMP4Q99727 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
TIMP4Q99727 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
TIMP4Q99727 AC090740.1-201ENST00000623193 2262 ntBASIC2.9□□□□□ -1.94
TIMP4Q99727 Y_RNA.274-201ENST00000364714 101 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 Y_RNA.297-201ENST00000364950 91 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 RNU6-1062P-201ENST00000383908 107 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 MIR128-1-201ENST00000384921 82 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
TIMP4Q99727 SNORA48.5-201ENST00000391143 135 ntBASIC2.9□□□□□ -1.95
TIMP4Q99727 RNU1-139P-201ENST00000391307 165 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 196.8 ms