Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC-0.53□□□□□ -2.49
SPENQ96T58 AL049870.4-201ENST00000555741 486 ntBASIC-0.53□□□□□ -2.49
SPENQ96T58 MTND1P15-201ENST00000579262 949 ntBASIC-0.53□□□□□ -2.49
SPENQ96T58 MIR3529-201ENST00000637713 78 ntBASIC-0.53□□□□□ -2.49
SPENQ96T58 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.53□□□□□ -2.49
SPENQ96T58 SNORA75.6-201ENST00000391318 127 ntBASIC-0.53□□□□□ -2.49
SPENQ96T58 AL355816.2-201ENST00000610049 647 ntBASIC-0.53□□□□□ -2.49
SPENQ96T58 RNU6-925P-201ENST00000384629 104 ntBASIC-0.53□□□□□ -2.49
SPENQ96T58 MT-TC-201ENST00000387405 66 ntBASIC-0.53□□□□□ -2.49
SPENQ96T58 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.53□□□□□ -2.49
SPENQ96T58 MTCO2P18-201ENST00000457151 658 ntBASIC-0.53□□□□□ -2.49
SPENQ96T58 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-0.53□□□□□ -2.49
SPENQ96T58 MAL2-206ENST00000522187 547 ntTSL 4 BASIC-0.53□□□□□ -2.49
SPENQ96T58 POLR2KP1-201ENST00000553226 168 ntBASIC-0.53□□□□□ -2.49
SPENQ96T58 AC093249.1-201ENST00000567049 203 ntBASIC-0.53□□□□□ -2.49
SPENQ96T58 AC009268.2-201ENST00000621925 457 ntBASIC-0.53□□□□□ -2.49
SPENQ96T58 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-0.54□□□□□ -2.5
SPENQ96T58 AL592447.1-201ENST00000447592 540 ntBASIC-0.54□□□□□ -2.5
SPENQ96T58 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.54□□□□□ -2.5
SPENQ96T58 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
SPENQ96T58 RNU6-87P-201ENST00000607561 108 ntBASIC-0.54□□□□□ -2.5
SPENQ96T58 MIR6755-201ENST00000619993 66 ntBASIC-0.54□□□□□ -2.5
SPENQ96T58 AC136475.10-201ENST00000620253 385 ntBASIC-0.54□□□□□ -2.5
SPENQ96T58 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.54□□□□□ -2.5
SPENQ96T58 SNORD114-11-201ENST00000363738 75 ntBASIC-0.54□□□□□ -2.5
SPENQ96T58 C8orf59P1-201ENST00000429930 303 ntBASIC-0.54□□□□□ -2.5
SPENQ96T58 RNU7-165P-201ENST00000458864 60 ntBASIC-0.54□□□□□ -2.5
SPENQ96T58 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.54□□□□□ -2.5
SPENQ96T58 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-0.54□□□□□ -2.5
SPENQ96T58 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.54□□□□□ -2.5
SPENQ96T58 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.54□□□□□ -2.5
SPENQ96T58 RNU6-697P-201ENST00000363348 107 ntBASIC-0.54□□□□□ -2.5
SPENQ96T58 RNU6-944P-201ENST00000364023 107 ntBASIC-0.54□□□□□ -2.5
SPENQ96T58 YWHAZP8-201ENST00000436935 731 ntBASIC-0.54□□□□□ -2.5
SPENQ96T58 AC002429.1-201ENST00000437672 148 ntBASIC-0.54□□□□□ -2.5
SPENQ96T58 RPS26P48-201ENST00000491713 339 ntBASIC-0.54□□□□□ -2.5
SPENQ96T58 AC097473.1-201ENST00000508142 408 ntBASIC-0.54□□□□□ -2.5
SPENQ96T58 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC-0.54□□□□□ -2.5
SPENQ96T58 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.54□□□□□ -2.5
SPENQ96T58 ZNF849P-201ENST00000594711 1566 ntBASIC-0.55□□□□□ -2.5
SPENQ96T58 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC-0.55□□□□□ -2.5
SPENQ96T58 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.55□□□□□ -2.5
SPENQ96T58 RNU6-116P-201ENST00000384042 109 ntBASIC-0.55□□□□□ -2.5
SPENQ96T58 NDUFS5P4-201ENST00000412983 318 ntBASIC-0.55□□□□□ -2.5
SPENQ96T58 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.55□□□□□ -2.5
SPENQ96T58 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.55□□□□□ -2.5
SPENQ96T58 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.55□□□□□ -2.5
SPENQ96T58 LRRC34P1-201ENST00000542742 915 ntBASIC-0.55□□□□□ -2.5
SPENQ96T58 RPL23AP91-201ENST00000569211 455 ntBASIC-0.55□□□□□ -2.5
SPENQ96T58 AC018926.1-201ENST00000616335 435 ntBASIC-0.55□□□□□ -2.5
SPENQ96T58 AC073968.1-201ENST00000618594 637 ntBASIC-0.55□□□□□ -2.5
SPENQ96T58 MIR520A-201ENST00000384862 85 ntBASIC-0.55□□□□□ -2.5
SPENQ96T58 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.55□□□□□ -2.5
SPENQ96T58 AL670379.3-201ENST00000605040 251 ntBASIC-0.55□□□□□ -2.5
SPENQ96T58 RMST_5.1-201ENST00000618704 126 ntBASIC-0.55□□□□□ -2.5
SPENQ96T58 AC019226.1-201ENST00000625666 515 ntBASIC-0.55□□□□□ -2.5
SPENQ96T58 AL162726.3-218ENST00000636401 95 ntBASIC-0.55□□□□□ -2.5
SPENQ96T58 RNA5SP111-201ENST00000411386 101 ntBASIC-0.56□□□□□ -2.5
SPENQ96T58 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.56□□□□□ -2.5
SPENQ96T58 RNU1-131P-201ENST00000458943 161 ntBASIC-0.56□□□□□ -2.5
SPENQ96T58 AL391001.1-201ENST00000602747 715 ntBASIC-0.56□□□□□ -2.5
SPENQ96T58 MTND4P4-201ENST00000439033 1366 ntBASIC-0.56□□□□□ -2.5
SPENQ96T58 RNU6-1243P-201ENST00000364028 107 ntBASIC-0.56□□□□□ -2.5
SPENQ96T58 SNORA80D-201ENST00000384488 135 ntBASIC-0.56□□□□□ -2.5
SPENQ96T58 MIR29B2-201ENST00000385055 81 ntBASIC-0.56□□□□□ -2.5
SPENQ96T58 AC068533.2-201ENST00000411872 306 ntBASIC-0.56□□□□□ -2.5
SPENQ96T58 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.56□□□□□ -2.5
SPENQ96T58 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC-0.56□□□□□ -2.5
SPENQ96T58 ZNF736P6Y-201ENST00000447526 1213 ntBASIC-0.56□□□□□ -2.5
SPENQ96T58 AC105036.1-201ENST00000566222 271 ntBASIC-0.56□□□□□ -2.5
SPENQ96T58 NDUFA8P1-201ENST00000605525 367 ntBASIC-0.56□□□□□ -2.5
SPENQ96T58 U2.21-201ENST00000637295 81 ntBASIC-0.56□□□□□ -2.5
SPENQ96T58 AC107982.1-201ENST00000507171 1300 ntBASIC-0.56□□□□□ -2.5
SPENQ96T58 RNU6-374P-201ENST00000364146 108 ntBASIC-0.56□□□□□ -2.5
SPENQ96T58 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.56□□□□□ -2.5
SPENQ96T58 AC006210.1-201ENST00000424882 111 ntBASIC-0.56□□□□□ -2.5
SPENQ96T58 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.56□□□□□ -2.5
SPENQ96T58 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.56□□□□□ -2.5
SPENQ96T58 AC022616.2-201ENST00000523185 300 ntBASIC-0.56□□□□□ -2.5
SPENQ96T58 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.56□□□□□ -2.5
SPENQ96T58 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC-0.56□□□□□ -2.5
SPENQ96T58 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.57□□□□□ -2.5
SPENQ96T58 AC011233.1-201ENST00000422812 283 ntBASIC-0.57□□□□□ -2.5
SPENQ96T58 OR9P1P-201ENST00000496431 281 ntBASIC-0.57□□□□□ -2.5
SPENQ96T58 AC093259.1-201ENST00000509755 300 ntBASIC-0.57□□□□□ -2.5
SPENQ96T58 SNORA70.12-201ENST00000516084 153 ntBASIC-0.57□□□□□ -2.5
SPENQ96T58 RNA5SP216-201ENST00000516111 123 ntBASIC-0.57□□□□□ -2.5
SPENQ96T58 MIR4499-201ENST00000584834 69 ntBASIC-0.57□□□□□ -2.5
SPENQ96T58 uc_338.28-201ENST00000612082 187 ntBASIC-0.57□□□□□ -2.5
SPENQ96T58 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.57□□□□□ -2.5
SPENQ96T58 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.57□□□□□ -2.5
SPENQ96T58 MTCO2P31-201ENST00000402702 684 ntBASIC-0.57□□□□□ -2.5
SPENQ96T58 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC-0.57□□□□□ -2.5
SPENQ96T58 RPL39P38-201ENST00000467018 153 ntBASIC-0.57□□□□□ -2.5
SPENQ96T58 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.57□□□□□ -2.5
SPENQ96T58 PTP4A1P4-201ENST00000512479 322 ntBASIC-0.57□□□□□ -2.5
SPENQ96T58 MIR3169-201ENST00000578032 83 ntBASIC-0.57□□□□□ -2.5
SPENQ96T58 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
SPENQ96T58 SNORD114-14-201ENST00000362723 75 ntBASIC-0.57□□□□□ -2.5
SPENQ96T58 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms