Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SNX18Q96RF0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.86□□□□□ -1.95
SNX18Q96RF0 Y_RNA.27-201ENST00000362540 103 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 Y_RNA.64-201ENST00000362845 102 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 RNU1-76P-201ENST00000362903 159 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 RNU5B-2P-201ENST00000363036 113 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 Y_RNA.222-201ENST00000364264 102 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.86□□□□□ -1.95
SNX18Q96RF0 Y_RNA.396-201ENST00000383949 103 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 RNU6-17P-201ENST00000384245 107 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 RNU6-18P-201ENST00000384527 107 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 UBA52P6-201ENST00000399822 382 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 NDUFB4P4-201ENST00000404822 243 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 AC138623.1-201ENST00000418060 216 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 USP9YP16-201ENST00000430287 407 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.86□□□□□ -1.95
SNX18Q96RF0 RPEP5-201ENST00000441137 268 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 RPS12P18-201ENST00000442381 270 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 USP9YP23-201ENST00000455085 407 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 RPS27P26-201ENST00000494583 239 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 AC016632.1-201ENST00000503994 196 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 RNU6-897P-201ENST00000517135 105 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.86□□□□□ -1.95
SNX18Q96RF0 AC022868.1-201ENST00000517767 391 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 AC034114.1-201ENST00000520293 285 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 AL442163.3-201ENST00000554110 156 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.86□□□□□ -1.95
SNX18Q96RF0 AC105137.2-201ENST00000569073 466 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 AC090617.3-201ENST00000573670 475 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 AC023043.3-201ENST00000593113 385 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 RMST_6.1-201ENST00000611980 203 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 MIR7112-201ENST00000616126 65 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.86□□□□□ -1.95
SNX18Q96RF0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.86□□□□□ -1.95
SNX18Q96RF0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.86□□□□□ -1.95
SNX18Q96RF0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SNX18Q96RF0 AL365361.1-201ENST00000566942 3481 ntBASIC2.85□□□□□ -1.95
SNX18Q96RF0 SNORD115-32-201ENST00000364079 82 ntBASIC2.85□□□□□ -1.95
SNX18Q96RF0 MIR128-1-201ENST00000384921 82 ntBASIC2.85□□□□□ -1.95
SNX18Q96RF0 MIR487A-201ENST00000385009 80 ntBASIC2.85□□□□□ -1.95
SNX18Q96RF0 MIR181B1-201ENST00000385240 110 ntBASIC2.85□□□□□ -1.95
SNX18Q96RF0 RNU6-130P-201ENST00000411112 103 ntBASIC2.85□□□□□ -1.95
SNX18Q96RF0 AC244670.1-201ENST00000436879 112 ntBASIC2.85□□□□□ -1.95
SNX18Q96RF0 AC006028.1-201ENST00000438379 402 ntBASIC2.85□□□□□ -1.95
SNX18Q96RF0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.85□□□□□ -1.95
SNX18Q96RF0 FCF1P4-201ENST00000448326 183 ntBASIC2.85□□□□□ -1.95
SNX18Q96RF0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.85□□□□□ -1.95
SNX18Q96RF0 RPS29P2-201ENST00000479278 136 ntBASIC2.85□□□□□ -1.95
SNX18Q96RF0 AP004217.1-201ENST00000480579 346 ntBASIC2.85□□□□□ -1.95
SNX18Q96RF0 AC010469.2-201ENST00000496412 480 ntBASIC2.85□□□□□ -1.95
SNX18Q96RF0 MIR2682-201ENST00000580305 110 ntBASIC2.85□□□□□ -1.95
SNX18Q96RF0 RPS15AP11-201ENST00000594193 385 ntBASIC2.85□□□□□ -1.95
SNX18Q96RF0 RNU6-91P-201ENST00000607774 107 ntBASIC2.85□□□□□ -1.95
SNX18Q96RF0 AC096772.1-201ENST00000609146 564 ntBASIC2.85□□□□□ -1.95
SNX18Q96RF0 uc_338.25-201ENST00000613756 156 ntBASIC2.85□□□□□ -1.95
SNX18Q96RF0 MIR8062-201ENST00000621515 85 ntBASIC2.85□□□□□ -1.95
SNX18Q96RF0 U6.92-201ENST00000636464 89 ntBASIC2.85□□□□□ -1.95
SNX18Q96RF0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.85□□□□□ -1.95
SNX18Q96RF0 AC002543.1-201ENST00000299783 1954 ntBASIC2.85□□□□□ -1.95
SNX18Q96RF0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.84□□□□□ -1.95
SNX18Q96RF0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
SNX18Q96RF0 MAPK10-322ENST00000641485 4530 ntBASIC2.84□□□□□ -1.95
SNX18Q96RF0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
SNX18Q96RF0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.84□□□□□ -1.95
SNX18Q96RF0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
SNX18Q96RF0 Y_RNA.19-201ENST00000362462 99 ntBASIC2.84□□□□□ -1.95
SNX18Q96RF0 RNU6-770P-201ENST00000363929 105 ntBASIC2.84□□□□□ -1.95
SNX18Q96RF0 Y_RNA.276-201ENST00000364732 109 ntBASIC2.84□□□□□ -1.95
SNX18Q96RF0 Y_RNA.556-201ENST00000384677 113 ntBASIC2.84□□□□□ -1.95
SNX18Q96RF0 MIR153-2-201ENST00000385225 87 ntBASIC2.84□□□□□ -1.95
SNX18Q96RF0 SNORA48.2-201ENST00000390926 124 ntBASIC2.84□□□□□ -1.95
SNX18Q96RF0 RN7SKP61-201ENST00000410642 295 ntBASIC2.84□□□□□ -1.95
SNX18Q96RF0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.84□□□□□ -1.95
SNX18Q96RF0 AC078809.1-201ENST00000427601 140 ntBASIC2.84□□□□□ -1.95
SNX18Q96RF0 snoU13.6-201ENST00000458785 104 ntBASIC2.84□□□□□ -1.95
SNX18Q96RF0 AP000870.1-201ENST00000472927 406 ntBASIC2.84□□□□□ -1.95
SNX18Q96RF0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.84□□□□□ -1.95
SNX18Q96RF0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.84□□□□□ -1.95
SNX18Q96RF0 RNU6-56P-201ENST00000516986 93 ntBASIC2.84□□□□□ -1.95
SNX18Q96RF0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.84□□□□□ -1.95
SNX18Q96RF0 AC016256.1-201ENST00000547971 354 ntBASIC2.84□□□□□ -1.95
SNX18Q96RF0 MIR5680-201ENST00000577577 84 ntBASIC2.84□□□□□ -1.95
SNX18Q96RF0 MIR5571-201ENST00000577998 113 ntBASIC2.84□□□□□ -1.95
SNX18Q96RF0 AC125232.2-201ENST00000592457 143 ntBASIC2.84□□□□□ -1.95
SNX18Q96RF0 AL450472.1-202ENST00000637286 180 ntBASIC2.84□□□□□ -1.95
SNX18Q96RF0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SNX18Q96RF0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.96
SNX18Q96RF0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.84□□□□□ -1.96
SNX18Q96RF0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.83□□□□□ -1.96
SNX18Q96RF0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
SNX18Q96RF0 AC092268.1-201ENST00000342691 405 ntBASIC2.83□□□□□ -1.96
SNX18Q96RF0 RNU6-799P-201ENST00000363567 107 ntBASIC2.83□□□□□ -1.96
SNX18Q96RF0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SNX18Q96RF0 Y_RNA.458-201ENST00000384240 102 ntBASIC2.83□□□□□ -1.96
SNX18Q96RF0 Y_RNA.461-201ENST00000384263 103 ntBASIC2.83□□□□□ -1.96
SNX18Q96RF0 Y_RNA.618-201ENST00000410949 107 ntBASIC2.83□□□□□ -1.96
SNX18Q96RF0 AC009414.1-201ENST00000427200 443 ntBASIC2.83□□□□□ -1.96
SNX18Q96RF0 AP001324.2-201ENST00000461163 319 ntBASIC2.83□□□□□ -1.96
SNX18Q96RF0 RNU6-826P-201ENST00000516827 104 ntBASIC2.83□□□□□ -1.96
SNX18Q96RF0 HSPE1P20-201ENST00000538133 289 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms