Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 CYP4A27P-201ENST00000567218 190 ntBASIC0.52□□□□□ -2.33
CCDC42Q96M95 BNIP3P16-201ENST00000589779 534 ntBASIC0.52□□□□□ -2.33
CCDC42Q96M95 AC121334.2-201ENST00000605387 271 ntBASIC0.52□□□□□ -2.33
CCDC42Q96M95 PART1_2.1-201ENST00000612397 250 ntBASIC0.52□□□□□ -2.33
CCDC42Q96M95 AC136475.10-201ENST00000620253 385 ntBASIC0.52□□□□□ -2.33
CCDC42Q96M95 Z69720.2-201ENST00000624755 279 ntBASIC0.52□□□□□ -2.33
CCDC42Q96M95 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.52□□□□□ -2.33
CCDC42Q96M95 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CCDC42Q96M95 SNORD116.1-201ENST00000365628 92 ntBASIC0.51□□□□□ -2.33
CCDC42Q96M95 MIR520E-201ENST00000384867 87 ntBASIC0.51□□□□□ -2.33
CCDC42Q96M95 RNA5SP111-201ENST00000411386 101 ntBASIC0.51□□□□□ -2.33
CCDC42Q96M95 AC078809.1-201ENST00000427601 140 ntBASIC0.51□□□□□ -2.33
CCDC42Q96M95 ISCA1P6-201ENST00000427740 390 ntBASIC0.51□□□□□ -2.33
CCDC42Q96M95 AC245047.7-201ENST00000440265 293 ntBASIC0.51□□□□□ -2.33
CCDC42Q96M95 BET1P1-201ENST00000482276 359 ntBASIC0.51□□□□□ -2.33
CCDC42Q96M95 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CCDC42Q96M95 AC010376.1-201ENST00000522101 334 ntBASIC0.51□□□□□ -2.33
CCDC42Q96M95 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.51□□□□□ -2.33
CCDC42Q96M95 AC068790.6-201ENST00000602558 258 ntBASIC0.51□□□□□ -2.33
CCDC42Q96M95 AL592221.1-201ENST00000605266 382 ntBASIC0.51□□□□□ -2.33
CCDC42Q96M95 AC104465.1-201ENST00000611365 139 ntBASIC0.51□□□□□ -2.33
CCDC42Q96M95 OR4G1P-203ENST00000641984 1631 ntBASIC0.51□□□□□ -2.33
CCDC42Q96M95 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CCDC42Q96M95 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CCDC42Q96M95 AC114491.1-201ENST00000416095 246 ntBASIC0.5□□□□□ -2.33
CCDC42Q96M95 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.5□□□□□ -2.33
CCDC42Q96M95 AC011233.1-201ENST00000422812 283 ntBASIC0.5□□□□□ -2.33
CCDC42Q96M95 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CCDC42Q96M95 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.5□□□□□ -2.33
CCDC42Q96M95 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.5□□□□□ -2.33
CCDC42Q96M95 MTCYBP1-201ENST00000454315 1119 ntBASIC0.5□□□□□ -2.33
CCDC42Q96M95 SNRPGP7-201ENST00000469016 106 ntBASIC0.5□□□□□ -2.33
CCDC42Q96M95 RNA5SP255-201ENST00000516370 107 ntBASIC0.5□□□□□ -2.33
CCDC42Q96M95 MTATP6P15-201ENST00000527233 835 ntBASIC0.5□□□□□ -2.33
CCDC42Q96M95 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.5□□□□□ -2.33
CCDC42Q96M95 EIF4A1P12-201ENST00000551910 141 ntBASIC0.5□□□□□ -2.33
CCDC42Q96M95 MIR3118-1-201ENST00000581787 76 ntBASIC0.5□□□□□ -2.33
CCDC42Q96M95 FAM106DP-201ENST00000586416 501 ntBASIC0.5□□□□□ -2.33
CCDC42Q96M95 AL606834.3-201ENST00000602615 496 ntBASIC0.5□□□□□ -2.33
CCDC42Q96M95 AL513534.2-201ENST00000603836 250 ntBASIC0.5□□□□□ -2.33
CCDC42Q96M95 AC021506.2-201ENST00000612354 169 ntBASIC0.5□□□□□ -2.33
CCDC42Q96M95 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
CCDC42Q96M95 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
CCDC42Q96M95 SNORA26.3-201ENST00000391119 136 ntBASIC0.49□□□□□ -2.33
CCDC42Q96M95 MIR942-201ENST00000401111 86 ntBASIC0.49□□□□□ -2.33
CCDC42Q96M95 RNU2-3P-201ENST00000410144 191 ntBASIC0.49□□□□□ -2.33
CCDC42Q96M95 MTCO3P18-201ENST00000440206 761 ntBASIC0.49□□□□□ -2.33
CCDC42Q96M95 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.49□□□□□ -2.33
CCDC42Q96M95 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.49□□□□□ -2.33
CCDC42Q96M95 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.49□□□□□ -2.33
CCDC42Q96M95 AL163973.1-201ENST00000484753 577 ntBASIC0.49□□□□□ -2.33
CCDC42Q96M95 RPS23P5-201ENST00000495419 428 ntBASIC0.49□□□□□ -2.33
CCDC42Q96M95 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.49□□□□□ -2.33
CCDC42Q96M95 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.49□□□□□ -2.33
CCDC42Q96M95 MTCO3P7-201ENST00000510008 774 ntBASIC0.49□□□□□ -2.33
CCDC42Q96M95 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.49□□□□□ -2.33
CCDC42Q96M95 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.49□□□□□ -2.33
CCDC42Q96M95 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.49□□□□□ -2.33
CCDC42Q96M95 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.49□□□□□ -2.33
CCDC42Q96M95 AC112187.2-201ENST00000604345 283 ntBASIC0.49□□□□□ -2.33
CCDC42Q96M95 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.49□□□□□ -2.33
CCDC42Q96M95 AL157786.1-207ENST00000627771 695 ntBASIC0.49□□□□□ -2.33
CCDC42Q96M95 BX322639.1-202ENST00000423987 2213 ntBASIC0.48□□□□□ -2.33
CCDC42Q96M95 Y_RNA.110-201ENST00000363220 99 ntBASIC0.48□□□□□ -2.33
CCDC42Q96M95 SNORD56.2-201ENST00000363242 71 ntBASIC0.48□□□□□ -2.33
CCDC42Q96M95 RNA5SP499-201ENST00000363982 119 ntBASIC0.48□□□□□ -2.33
CCDC42Q96M95 Y_RNA.363-201ENST00000365529 113 ntBASIC0.48□□□□□ -2.33
CCDC42Q96M95 RNU6-950P-201ENST00000384651 107 ntBASIC0.48□□□□□ -2.33
CCDC42Q96M95 AF228730.1-201ENST00000397972 663 ntBASIC0.48□□□□□ -2.33
CCDC42Q96M95 RNU6-293P-201ENST00000411259 106 ntBASIC0.48□□□□□ -2.33
CCDC42Q96M95 RNU6-607P-201ENST00000411283 108 ntBASIC0.48□□□□□ -2.33
CCDC42Q96M95 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.48□□□□□ -2.33
CCDC42Q96M95 C1DP2-201ENST00000418167 426 ntBASIC0.48□□□□□ -2.33
CCDC42Q96M95 AC073614.1-201ENST00000438690 650 ntBASIC0.48□□□□□ -2.33
CCDC42Q96M95 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.48□□□□□ -2.33
CCDC42Q96M95 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.48□□□□□ -2.33
CCDC42Q96M95 MTND3P25-201ENST00000509243 135 ntBASIC0.48□□□□□ -2.33
CCDC42Q96M95 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
CCDC42Q96M95 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.48□□□□□ -2.33
CCDC42Q96M95 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.48□□□□□ -2.33
CCDC42Q96M95 TPRKBP2-201ENST00000565969 475 ntBASIC0.48□□□□□ -2.33
CCDC42Q96M95 AC136443.5-201ENST00000603741 370 ntBASIC0.48□□□□□ -2.33
CCDC42Q96M95 AC064872.1-201ENST00000604823 1072 ntBASIC0.48□□□□□ -2.33
CCDC42Q96M95 AC009229.3-201ENST00000608056 282 ntBASIC0.48□□□□□ -2.33
CCDC42Q96M95 AC009509.4-201ENST00000619202 509 ntBASIC0.48□□□□□ -2.33
CCDC42Q96M95 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.48□□□□□ -2.33
CCDC42Q96M95 RNU6-969P-201ENST00000383900 105 ntBASIC0.47□□□□□ -2.33
CCDC42Q96M95 SNORA80D-201ENST00000384488 135 ntBASIC0.47□□□□□ -2.33
CCDC42Q96M95 RNU6-692P-201ENST00000384496 107 ntBASIC0.47□□□□□ -2.33
CCDC42Q96M95 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
CCDC42Q96M95 CALM2P2-201ENST00000428512 440 ntBASIC0.47□□□□□ -2.33
CCDC42Q96M95 C1DP4-201ENST00000455429 424 ntBASIC0.47□□□□□ -2.33
CCDC42Q96M95 SNRPFP3-201ENST00000457792 225 ntBASIC0.47□□□□□ -2.33
CCDC42Q96M95 AC092991.1-201ENST00000477176 376 ntBASIC0.47□□□□□ -2.33
CCDC42Q96M95 RNU2-34P-201ENST00000516534 121 ntBASIC0.47□□□□□ -2.33
CCDC42Q96M95 RNA5SP121-201ENST00000516537 101 ntBASIC0.47□□□□□ -2.33
CCDC42Q96M95 AC022616.6-201ENST00000520479 119 ntBASIC0.47□□□□□ -2.33
CCDC42Q96M95 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.47□□□□□ -2.33
CCDC42Q96M95 MIR5695-201ENST00000579717 85 ntBASIC0.47□□□□□ -2.33
CCDC42Q96M95 AL929325.1-201ENST00000603096 117 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms