Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC078795.3-201ENST00000602913 472 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 RMST_3.1-201ENST00000611651 109 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 MIR6840-201ENST00000611937 71 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 MIR1248-201ENST00000629190 106 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
SNRNP40Q96DI7 MTND4P23-201ENST00000447723 1363 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2□□□□□ -2.09
SNRNP40Q96DI7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
SNRNP40Q96DI7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SNRNP40Q96DI7 ZNF702P-202ENST00000434269 1966 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
SNRNP40Q96DI7 RNA5SP276-201ENST00000362580 94 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 Y_RNA.89-201ENST00000363031 102 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 U3.9-201ENST00000363823 204 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 RNU6-534P-201ENST00000364877 106 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 RNU6-1329P-201ENST00000365664 107 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 RNU6-26P-201ENST00000383985 107 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 RNU6-933P-201ENST00000384424 107 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2□□□□□ -2.09
SNRNP40Q96DI7 RNU11-3P-201ENST00000391111 133 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 MIR1262-201ENST00000408276 93 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2□□□□□ -2.09
SNRNP40Q96DI7 CR769767.1-201ENST00000436337 346 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2□□□□□ -2.09
SNRNP40Q96DI7 NDUFAF4P4-201ENST00000454883 502 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2□□□□□ -2.09
SNRNP40Q96DI7 AC091874.1-201ENST00000511402 339 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 RPL39P5-202ENST00000512505 151 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 Y_RNA.665-201ENST00000516177 98 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 RNU6-295P-201ENST00000516901 104 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 RNA5SP402-201ENST00000517148 110 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 MTND1P35-201ENST00000526739 508 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2□□□□□ -2.09
SNRNP40Q96DI7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2□□□□□ -2.09
SNRNP40Q96DI7 AL022345.1-201ENST00000607292 135 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 AC064836.2-201ENST00000609491 462 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 MIR6766-201ENST00000622641 72 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 AC130454.1-201ENST00000622948 401 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 AC024614.3-201ENST00000637860 256 ntBASIC2□□□□□ -2.09
SNRNP40Q96DI7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2□□□□□ -2.09
SNRNP40Q96DI7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
SNRNP40Q96DI7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 MIR21-201ENST00000362134 72 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 RNU6-227P-201ENST00000362865 103 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 Y_RNA.238-201ENST00000364441 102 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 RNU1-51P-201ENST00000365345 176 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 Y_RNA.373-201ENST00000365600 103 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 MIR208B-201ENST00000401172 77 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 AL512604.1-201ENST00000404812 257 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 MTCYBP2-201ENST00000407745 171 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 FCF1P9-201ENST00000412546 282 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 MTND3P9-201ENST00000429526 346 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 PMCHL2-203ENST00000457791 237 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 AC025465.4-201ENST00000513422 638 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 RNU6-1332P-201ENST00000516666 104 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 RNA5SP490-201ENST00000517141 136 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 CYP4A27P-201ENST00000567218 190 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 AP003465.2-201ENST00000602571 373 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 Z98751.3-201ENST00000604447 521 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 AC104458.1-201ENST00000608243 463 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 AC068944.2-201ENST00000610373 403 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 AL137847.3-201ENST00000611521 109 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 FAM157A-202ENST00000615155 405 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 SDR42E1P4-201ENST00000620894 481 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 AC008555.8-201ENST00000623602 2168 ntBASIC1.99□□□□□ -2.09
SNRNP40Q96DI7 AC092881.1-201ENST00000638218 2733 ntBASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 Y_RNA.99-201ENST00000363138 105 ntBASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 SNORD32B-201ENST00000364460 84 ntBASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 Y_RNA.573-201ENST00000384763 105 ntBASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 U8.13-201ENST00000390842 128 ntBASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 SNORA26.3-201ENST00000391119 136 ntBASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 RNA5SP465-201ENST00000391195 109 ntBASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 SNORD115-47-201ENST00000391226 86 ntBASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 MIR450B-201ENST00000401182 78 ntBASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 RNA5SP450-201ENST00000411206 102 ntBASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 EIF1AXP1-201ENST00000419267 435 ntBASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 EIF1P1-201ENST00000421436 341 ntBASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 BX510359.4-201ENST00000423750 193 ntBASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 AC083904.1-201ENST00000487828 231 ntBASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 AC005741.1-201ENST00000511094 432 ntBASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 CYP2C61P-201ENST00000604072 290 ntBASIC1.98□□□□□ -2.09
SNRNP40Q96DI7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms